RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 OAS1P00973 400 aaKnown RBP13.87□□□□□ -0.19
CLK3-203ENST00000454830 ACRP10323 421 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 VEPH1Q14D04 833 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 GRTP1Q5TC63 336 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 PACS2Q86VP3 889 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 RNF135Q8IUD6 432 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 CRLF3Q8IUI8 442 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 AGR3Q8TD06 166 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 SLC39A13Q96H72 371 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 FCRL5Q96RD9 977 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 TMEM175Q9BSA9 504 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 HEY2Q9UBP5 337 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 BAIAP2L1Q9UHR4 511 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 BUD23O43709 281 aaKnown RBP13.87□□□□□ -0.19
CLK3-203ENST00000454830 ALDH1A2O94788 518 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 TACR2P21452 398 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 ETV4P43268 484 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 GLRBP48167 497 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 KCTD11Q693B1 232 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 FSTL4Q6MZW2 842 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 C16orf59Q7L2K0 433 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 IFT43Q96FT9 208 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 ZNF419Q96HQ0 510 aaPredicted RBP13.87□□□□□ -0.19
CLK3-203ENST00000454830 IGSF21Q96ID5 467 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 SLC2A6Q9UGQ3 507 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 SOX13Q9UN79 622 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 A0A096LPK6 155 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 FAM237BA0A1B0GVD1 139 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 CCL22O00626 93 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 MYL2P10916 166 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 CRHR1P34998 444 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 SLC11A2P49281 568 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 SLC12A2P55011 1212 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 RPS24P62847 133 aaKnown RBP13.87□□□□□ -0.19
CLK3-203ENST00000454830 PCID2Q5JVF3 399 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 HECTD3Q5T447 861 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 MANEALQ5VSG8 457 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 ZNF784Q8NCA9 323 aaPredicted RBP13.87□□□□□ -0.19
CLK3-203ENST00000454830 EXOC2Q96KP1 924 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 ZNF558Q96NG5 402 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 TMEM120AQ9BXJ8 343 aa13.87□□□□□ -0.19
CLK3-203ENST00000454830 PAK6Q9NQU5 681 aaPredicted RBP13.87□□□□□ -0.19
CLK3-203ENST00000454830 AP3B1O00203 1094 aa13.86□□□□□ -0.19
CLK3-203ENST00000454830 PIRTP0C851 137 aa13.86□□□□□ -0.19
CLK3-203ENST00000454830 HTR7P34969 479 aa13.86□□□□□ -0.19
CLK3-203ENST00000454830 RNF43Q68DV7 783 aa13.86□□□□□ -0.19
CLK3-203ENST00000454830 DENND6AQ8IWF6 608 aa13.86□□□□□ -0.19
CLK3-203ENST00000454830 VPS39Q96JC1 886 aa13.86□□□□□ -0.19
CLK3-203ENST00000454830 C1orf74Q96LT6 269 aa13.86□□□□□ -0.19
CLK3-203ENST00000454830 IL12RB2Q99665 862 aa13.86□□□□□ -0.19
CLK3-203ENST00000454830 ENTPD7Q9NQZ7 604 aa13.86□□□□□ -0.19
CLK3-203ENST00000454830 HAO1Q9UJM8 370 aa13.86□□□□□ -0.19
CLK3-203ENST00000454830 SCN5AQ14524 2016 aa13.86□□□□□ -0.19
CLK3-203ENST00000454830 ZCWPW2A0A1B0GU75 182 aa13.86□□□□□ -0.19
CLK3-203ENST00000454830 URODP06132 367 aa13.86□□□□□ -0.19
CLK3-203ENST00000454830 SERPINB8P50452 374 aa13.86□□□□□ -0.19
CLK3-203ENST00000454830 TEDDM1Q5T9Z0 273 aa13.86□□□□□ -0.19
CLK3-203ENST00000454830 TMEM135Q86UB9 458 aa13.86□□□□□ -0.19
CLK3-203ENST00000454830 OR7D4Q8NG98 312 aa13.86□□□□□ -0.19
CLK3-203ENST00000454830 TMEM237Q96Q45 408 aa13.86□□□□□ -0.19
CLK3-203ENST00000454830 YME1L1Q96TA2 773 aa13.86□□□□□ -0.19
CLK3-203ENST00000454830 RBBP8Q99708 897 aa13.86□□□□□ -0.19
CLK3-203ENST00000454830 UXTQ9UBK9 157 aaPredicted RBP13.86□□□□□ -0.19
CLK3-203ENST00000454830 DCDC2Q9UHG0 476 aa13.86□□□□□ -0.19
CLK3-203ENST00000454830 NEU3Q9UQ49 428 aa13.86□□□□□ -0.19
CLK3-203ENST00000454830 CHKBQ9Y259 395 aa13.86□□□□□ -0.19
CLK3-203ENST00000454830 MYO16Q9Y6X6 1858 aa13.86□□□□□ -0.19
CLK3-203ENST00000454830 CBX6O95503 412 aa13.86□□□□□ -0.19
CLK3-203ENST00000454830 PAMP19021 973 aa13.86□□□□□ -0.19
CLK3-203ENST00000454830 LACTB2Q53H82 288 aaPredicted RBP13.86□□□□□ -0.19
CLK3-203ENST00000454830 TAF1BQ53T94 588 aaPredicted RBP13.86□□□□□ -0.19
CLK3-203ENST00000454830 ZNF470Q6ECI4 717 aa13.86□□□□□ -0.19
CLK3-203ENST00000454830 PKN3Q6P5Z2 889 aa13.86□□□□□ -0.19
CLK3-203ENST00000454830 OTOP2Q7RTS6 562 aa13.86□□□□□ -0.19
CLK3-203ENST00000454830 PNPLA1Q8N8W4 532 aa13.86□□□□□ -0.19
CLK3-203ENST00000454830 BLOC1S5Q8TDH9 187 aa13.86□□□□□ -0.19
CLK3-203ENST00000454830 PDCD6IPQ8WUM4 868 aaKnown RBP13.86□□□□□ -0.19
CLK3-203ENST00000454830 SEMA3CQ99985 751 aa13.86□□□□□ -0.19
CLK3-203ENST00000454830 NOL6Q9H6R4 1146 aaKnown RBP13.86□□□□□ -0.19
CLK3-203ENST00000454830 ACSS2Q9NR19 701 aa13.86□□□□□ -0.19
CLK3-203ENST00000454830 TMEM216Q9P0N5 145 aa13.86□□□□□ -0.19
CLK3-203ENST00000454830 PRKAG3Q9UGI9 489 aa13.86□□□□□ -0.19
CLK3-203ENST00000454830 LYPLA1O75608 230 aaPredicted RBP13.85□□□□□ -0.19
CLK3-203ENST00000454830 VNN2O95498 520 aa13.85□□□□□ -0.19
CLK3-203ENST00000454830 MPP1Q00013 466 aa13.85□□□□□ -0.19
CLK3-203ENST00000454830 SMARCB1Q12824 385 aa13.85□□□□□ -0.19
CLK3-203ENST00000454830 RGS9BPQ6ZS82 235 aa13.85□□□□□ -0.19
CLK3-203ENST00000454830 SH2D5Q6ZV89 423 aa13.85□□□□□ -0.19
CLK3-203ENST00000454830 SEZ6LQ9BYH1 1024 aa13.85□□□□□ -0.19
CLK3-203ENST00000454830 UBE2OQ9C0C9 1292 aaKnown RBP13.85□□□□□ -0.19
CLK3-203ENST00000454830 TASP1Q9H6P5 420 aa13.85□□□□□ -0.19
CLK3-203ENST00000454830 SEC24AO95486 1093 aa13.85□□□□□ -0.19
CLK3-203ENST00000454830 MBL2P11226 248 aaPredicted RBP13.85□□□□□ -0.19
CLK3-203ENST00000454830 RAG1P15918 1043 aa13.85□□□□□ -0.19
CLK3-203ENST00000454830 KCNJ2P63252 427 aa13.85□□□□□ -0.19
CLK3-203ENST00000454830 NAB1Q13506 487 aa13.85□□□□□ -0.19
CLK3-203ENST00000454830 EIF4EBP2Q13542 120 aaPredicted RBP13.85□□□□□ -0.19
CLK3-203ENST00000454830 HNRNPDQ14103 355 aaKnown RBP13.85□□□□□ -0.19
CLK3-203ENST00000454830 PDPK2PQ6A1A2 396 aa13.85□□□□□ -0.19
CLK3-203ENST00000454830 PTAR1Q7Z6K3 402 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 177.8 ms