RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 FAM131CQ96AQ9 280 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 PPP1R16AQ96I34 528 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 NAP1L5Q96NT1 182 aaPredicted RBP10.91□□□□□ -0.66
DDX39A-203ENST00000454233 CAMK1GQ96NX5 476 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 EPAS1Q99814 870 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 SYT11Q9BT88 431 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 CEP44Q9C0F1 390 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 TNKS2Q9H2K2 1166 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 HAUS4Q9H6D7 363 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 CBX8Q9HC52 389 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 PREBQ9HCU5 417 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 PARVAQ9NVD7 372 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 AIPL1Q9NZN9 384 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 IL36AQ9UHA7 158 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 DNAI1Q9UI46 699 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 DMTF1Q9Y222 760 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 KNL1Q8NG31 2342 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 ACACBO00763 2458 aa10.9□□□□□ -0.66
DDX39A-203ENST00000454233 H0Y8X5 98 aa10.9□□□□□ -0.66
DDX39A-203ENST00000454233 GOLGA6L19H0YKK7 550 aa10.9□□□□□ -0.66
DDX39A-203ENST00000454233 LATO43561 262 aa10.9□□□□□ -0.66
DDX39A-203ENST00000454233 CTSLP07711 333 aa10.9□□□□□ -0.66
DDX39A-203ENST00000454233 EPHB2P29323 1055 aa10.9□□□□□ -0.66
DDX39A-203ENST00000454233 MAT2AP31153 395 aaKnown RBP10.9□□□□□ -0.66
DDX39A-203ENST00000454233 ACVRL1P37023 503 aa10.9□□□□□ -0.66
DDX39A-203ENST00000454233 PRKCIP41743 596 aa10.9□□□□□ -0.66
DDX39A-203ENST00000454233 CTSKP43235 329 aa10.9□□□□□ -0.66
DDX39A-203ENST00000454233 FAM193AP78312 1265 aa10.9□□□□□ -0.66
DDX39A-203ENST00000454233 ARF5P84085 180 aa10.9□□□□□ -0.66
DDX39A-203ENST00000454233 NR1I3Q14994 352 aa10.9□□□□□ -0.66
DDX39A-203ENST00000454233 POLD3Q15054 466 aaPredicted RBP10.9□□□□□ -0.66
DDX39A-203ENST00000454233 INAVAQ3KP66 663 aa10.9□□□□□ -0.66
DDX39A-203ENST00000454233 SETMARQ53H47 684 aaPredicted RBP10.9□□□□□ -0.66
DDX39A-203ENST00000454233 CARD16Q5EG05 197 aa10.9□□□□□ -0.66
DDX39A-203ENST00000454233 ARSIQ5FYB1 569 aa10.9□□□□□ -0.66
DDX39A-203ENST00000454233 PPP1R15BQ5SWA1 713 aa10.9□□□□□ -0.66
DDX39A-203ENST00000454233 NAPEPLDQ6IQ20 393 aa10.9□□□□□ -0.66
DDX39A-203ENST00000454233 DPY19L3Q6ZPD9 716 aa10.9□□□□□ -0.66
DDX39A-203ENST00000454233 TMC6Q7Z403 805 aa10.9□□□□□ -0.66
DDX39A-203ENST00000454233 TRIM69Q86WT6 500 aa10.9□□□□□ -0.66
DDX39A-203ENST00000454233 CHST14Q8NCH0 376 aa10.9□□□□□ -0.66
DDX39A-203ENST00000454233 GRIN3AQ8TCU5 1115 aa10.9□□□□□ -0.66
DDX39A-203ENST00000454233 RHBDD1Q8TEB9 315 aa10.9□□□□□ -0.66
DDX39A-203ENST00000454233 ARHGEF2Q92974 986 aaKnown RBP10.9□□□□□ -0.66
DDX39A-203ENST00000454233 CDC6Q99741 560 aa10.9□□□□□ -0.66
DDX39A-203ENST00000454233 HEPHQ9BQS7 1158 aa10.9□□□□□ -0.66
DDX39A-203ENST00000454233 MAGEB5Q9BZ81 275 aa10.9□□□□□ -0.66
DDX39A-203ENST00000454233 CATSPERBQ9H7T0 1116 aa10.9□□□□□ -0.66
DDX39A-203ENST00000454233 EBF2Q9HAK2 575 aa10.9□□□□□ -0.66
DDX39A-203ENST00000454233 NDFIP2Q9NV92 336 aa10.9□□□□□ -0.66
DDX39A-203ENST00000454233 TAS2R14Q9NYV8 317 aa10.9□□□□□ -0.66
DDX39A-203ENST00000454233 PCOLCE2Q9UKZ9 415 aa10.9□□□□□ -0.66
DDX39A-203ENST00000454233 FZD10Q9ULW2 581 aa10.9□□□□□ -0.66
DDX39A-203ENST00000454233 APOBEC2Q9Y235 224 aaKnown RBP10.9□□□□□ -0.66
DDX39A-203ENST00000454233 FCF1Q9Y324 198 aaKnown RBP10.9□□□□□ -0.66
DDX39A-203ENST00000454233 A0A1W2PR77 199 aa10.89□□□□□ -0.67
DDX39A-203ENST00000454233 ZSCAN5CA6NGD5 496 aaPredicted RBP10.89□□□□□ -0.67
DDX39A-203ENST00000454233 C10orf142B7Z368 130 aa10.89□□□□□ -0.67
DDX39A-203ENST00000454233 KCNK3O14649 394 aa10.89□□□□□ -0.67
DDX39A-203ENST00000454233 CREB3O43889 395 aa10.89□□□□□ -0.67
DDX39A-203ENST00000454233 PCDHGA12O60330 932 aa10.89□□□□□ -0.67
DDX39A-203ENST00000454233 MAGEC1O60732 1142 aa10.89□□□□□ -0.67
DDX39A-203ENST00000454233 RNGTTO60942 597 aaKnown RBP10.89□□□□□ -0.67
DDX39A-203ENST00000454233 LEFTY1O75610 366 aa10.89□□□□□ -0.67
DDX39A-203ENST00000454233 RNF8O76064 485 aa10.89□□□□□ -0.67
DDX39A-203ENST00000454233 FTLP02792 175 aaPredicted RBP10.89□□□□□ -0.67
DDX39A-203ENST00000454233 GZMAP12544 262 aa10.89□□□□□ -0.67
DDX39A-203ENST00000454233 PSMA2P25787 234 aa10.89□□□□□ -0.67
DDX39A-203ENST00000454233 GRK6P43250 576 aa10.89□□□□□ -0.67
DDX39A-203ENST00000454233 CCNHP51946 323 aaPredicted RBP10.89□□□□□ -0.67
DDX39A-203ENST00000454233 UBASH3AP57075 661 aa10.89□□□□□ -0.67
DDX39A-203ENST00000454233 FANCCQ00597 558 aa10.89□□□□□ -0.67
DDX39A-203ENST00000454233 MAMLD1Q13495 774 aa10.89□□□□□ -0.67
DDX39A-203ENST00000454233 STAT4Q14765 748 aa10.89□□□□□ -0.67
DDX39A-203ENST00000454233 FIGNQ5HY92 759 aa10.89□□□□□ -0.67
DDX39A-203ENST00000454233 KCNT1Q5JUK3 1230 aa10.89□□□□□ -0.67
DDX39A-203ENST00000454233 PIP5KL1Q5T9C9 394 aa10.89□□□□□ -0.67
DDX39A-203ENST00000454233 PLEKHA7Q6IQ23 1121 aa10.89□□□□□ -0.67
DDX39A-203ENST00000454233 NEK5Q6P3R8 708 aa10.89□□□□□ -0.67
DDX39A-203ENST00000454233 ERN2Q76MJ5 926 aaKnown RBP10.89□□□□□ -0.67
DDX39A-203ENST00000454233 ZNF571Q7Z3V5 609 aaPredicted RBP10.89□□□□□ -0.67
DDX39A-203ENST00000454233 LUZP1Q86V48 1076 aa10.89□□□□□ -0.67
DDX39A-203ENST00000454233 PYROXD2Q8N2H3 581 aa10.89□□□□□ -0.67
DDX39A-203ENST00000454233 RYBPQ8N488 228 aaPredicted RBP10.89□□□□□ -0.67
DDX39A-203ENST00000454233 RTL3Q8N8U3 475 aaKnown RBP10.89□□□□□ -0.67
DDX39A-203ENST00000454233 ISG20Q96AZ6 181 aaKnown RBP10.89□□□□□ -0.67
DDX39A-203ENST00000454233 ARRDC3Q96B67 414 aa10.89□□□□□ -0.67
DDX39A-203ENST00000454233 TRIM11Q96F44 468 aa10.89□□□□□ -0.67
DDX39A-203ENST00000454233 ELF4Q99607 663 aaPredicted RBP10.89□□□□□ -0.67
DDX39A-203ENST00000454233 SCNM1Q9BWG6 230 aa10.89□□□□□ -0.67
DDX39A-203ENST00000454233 HDAC8Q9BY41 377 aa10.89□□□□□ -0.67
DDX39A-203ENST00000454233 TM6SF2Q9BZW4 377 aa10.89□□□□□ -0.67
DDX39A-203ENST00000454233 TTYH3Q9C0H2 523 aa10.89□□□□□ -0.67
DDX39A-203ENST00000454233 GDF3Q9NR23 364 aa10.89□□□□□ -0.67
DDX39A-203ENST00000454233 DONSONQ9NYP3 566 aa10.89□□□□□ -0.67
DDX39A-203ENST00000454233 NEU3Q9UQ49 428 aa10.89□□□□□ -0.67
DDX39A-203ENST00000454233 SCINQ9Y6U3 715 aa10.89□□□□□ -0.67
DDX39A-203ENST00000454233 PLXNA2O75051 1894 aa10.89□□□□□ -0.67
DDX39A-203ENST00000454233 CABIN1Q9Y6J0 2220 aa10.88□□□□□ -0.67
DDX39A-203ENST00000454233 A0A1B0GTQ1 180 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms