RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 SALL4Q9UJQ4 1053 aa18.45■□□□□ 0.54
SQSTM1-204ENST00000453046 ANKRD6Q9Y2G4 727 aa18.45■□□□□ 0.54
SQSTM1-204ENST00000453046 CAPN6Q9Y6Q1 641 aa18.45■□□□□ 0.54
SQSTM1-204ENST00000453046 DUSP10Q9Y6W6 482 aa18.45■□□□□ 0.54
SQSTM1-204ENST00000453046 MAP1BP46821 2468 aaKnown RBP18.45■□□□□ 0.54
SQSTM1-204ENST00000453046 ATMINO43313 823 aaPredicted RBP18.44■□□□□ 0.54
SQSTM1-204ENST00000453046 HYAL3O43820 417 aaPredicted RBP18.44■□□□□ 0.54
SQSTM1-204ENST00000453046 BNIP3LO60238 219 aa18.44■□□□□ 0.54
SQSTM1-204ENST00000453046 CNTN5O94779 1100 aa18.44■□□□□ 0.54
SQSTM1-204ENST00000453046 TRIM16O95361 564 aa18.44■□□□□ 0.54
SQSTM1-204ENST00000453046 RHOCP08134 193 aa18.44■□□□□ 0.54
SQSTM1-204ENST00000453046 ZNF883P0CG24 379 aa18.44■□□□□ 0.54
SQSTM1-204ENST00000453046 VAV1P15498 845 aa18.44■□□□□ 0.54
SQSTM1-204ENST00000453046 GOT1P17174 413 aa18.44■□□□□ 0.54
SQSTM1-204ENST00000453046 RRM1P23921 792 aa18.44■□□□□ 0.54
SQSTM1-204ENST00000453046 FLT3P36888 993 aa18.44■□□□□ 0.54
SQSTM1-204ENST00000453046 GNG11P61952 73 aa18.44■□□□□ 0.54
SQSTM1-204ENST00000453046 BNC1Q01954 994 aa18.44■□□□□ 0.54
SQSTM1-204ENST00000453046 C5orf22Q49AR2 442 aa18.44■□□□□ 0.54
SQSTM1-204ENST00000453046 ACBD5Q5T8D3 534 aaPredicted RBP18.44■□□□□ 0.54
SQSTM1-204ENST00000453046 PLEKHA7Q6IQ23 1121 aa18.44■□□□□ 0.54
SQSTM1-204ENST00000453046 OR52K2Q8NGK3 314 aa18.44■□□□□ 0.54
SQSTM1-204ENST00000453046 OR2T34Q8NGX1 318 aa18.44■□□□□ 0.54
SQSTM1-204ENST00000453046 ZNF564Q8TBZ8 553 aaPredicted RBP18.44■□□□□ 0.54
SQSTM1-204ENST00000453046 ALG14Q96F25 216 aa18.44■□□□□ 0.54
SQSTM1-204ENST00000453046 NUP85Q9BW27 656 aa18.44■□□□□ 0.54
SQSTM1-204ENST00000453046 MRPL47Q9HD33 250 aaKnown RBP18.44■□□□□ 0.54
SQSTM1-204ENST00000453046 CTTNBP2NLQ9P2B4 639 aa18.44■□□□□ 0.54
SQSTM1-204ENST00000453046 FNDC3AQ9Y2H6 1198 aaKnown RBP18.44■□□□□ 0.54
SQSTM1-204ENST00000453046 TBC1D30Q9Y2I9 924 aa18.44■□□□□ 0.54
SQSTM1-204ENST00000453046 SNX11Q9Y5W9 270 aa18.44■□□□□ 0.54
SQSTM1-204ENST00000453046 SNX10Q9Y5X0 201 aa18.44■□□□□ 0.54
SQSTM1-204ENST00000453046 TBC1D3DA0A087WVF3 549 aa18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 TBC1D3IA0A087WXS9 549 aa18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 TBC1D3EA0A087X179 549 aa18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 TBC1D3KA0A087X1G2 549 aa18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 A0A1W2PPC4 97 aa18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 TBC1D3FA6NER0 549 aaPredicted RBP18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 TBC1D3LB9A6J9 549 aa18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 SRGAP2O75044 1071 aa18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 IGHV4-34P06331 123 aa18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 TBC1D3HP0C7X1 549 aa18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 TNNT1P13805 278 aa18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 NOP2P46087 812 aaKnown RBP18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 NAP1L1P55209 391 aaKnown RBP18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 C21orf59P57076 290 aa18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 RACK1P63244 317 aaKnown RBP18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 SUZ12Q15022 739 aaKnown RBP18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 DLG2Q15700 870 aa18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 ZNF423Q2M1K9 1284 aa18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 ALFQ53S48 1182 aa18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 ZNF569Q5MCW4 686 aa18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 FAM46CQ5VWP2 391 aa18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 TBC1D3GQ6DHY5 549 aa18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 TBC1D3CQ6IPX1 549 aa18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 DNAJC24Q6P3W2 148 aa18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 LAYNQ6UX15 382 aa18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 UNQ6494/PRO21346Q6UXR6 183 aa18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 TBC1D3Q8IZP1 549 aaPredicted RBP18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 AADATQ8N5Z0 425 aa18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 SLC35G2Q8TBE7 412 aa18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 FRS2Q8WU20 508 aa18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 SKA1Q96BD8 255 aa18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 C1orf74Q96LT6 269 aa18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 CFAP57Q96MR6 1250 aa18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 C2orf49Q9BVC5 232 aaPredicted RBP18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 ACE2Q9BYF1 805 aaPredicted RBP18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 ANLNQ9NQW6 1124 aa18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 METTL5Q9NRN9 209 aaKnown RBP18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 PARVAQ9NVD7 372 aa18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 LCMT1Q9UIC8 334 aa18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 WASF3Q9UPY6 502 aa18.43■□□□□ 0.54
SQSTM1-204ENST00000453046 TCRBV5S1A1TA0A578 114 aa18.42■□□□□ 0.54
SQSTM1-204ENST00000453046 C1QTNF9BB2RNN3 333 aa18.42■□□□□ 0.54
SQSTM1-204ENST00000453046 BUB1O43683 1085 aa18.42■□□□□ 0.54
SQSTM1-204ENST00000453046 ATP9BO43861 1147 aa18.42■□□□□ 0.54
SQSTM1-204ENST00000453046 C1QTNF9P0C862 333 aa18.42■□□□□ 0.54
SQSTM1-204ENST00000453046 VASPP50552 380 aaPredicted RBP18.42■□□□□ 0.54
SQSTM1-204ENST00000453046 C6orf118Q5T5N4 469 aa18.42■□□□□ 0.54
SQSTM1-204ENST00000453046 C11orf63Q6NUN7 778 aa18.42■□□□□ 0.54
SQSTM1-204ENST00000453046 TFAP2DQ7Z6R9 452 aa18.42■□□□□ 0.54
SQSTM1-204ENST00000453046 SETD3Q86TU7 594 aaPredicted RBP18.42■□□□□ 0.54
SQSTM1-204ENST00000453046 FAM131BQ86XD5 332 aa18.42■□□□□ 0.54
SQSTM1-204ENST00000453046 SYCE1Q8N0S2 351 aa18.42■□□□□ 0.54
SQSTM1-204ENST00000453046 SLC35F6Q8N357 371 aa18.42■□□□□ 0.54
SQSTM1-204ENST00000453046 ATP11CQ8NB49 1132 aa18.42■□□□□ 0.54
SQSTM1-204ENST00000453046 TPCN2Q8NHX9 752 aa18.42■□□□□ 0.54
SQSTM1-204ENST00000453046 AASDHPPTQ9NRN7 309 aa18.42■□□□□ 0.54
SQSTM1-204ENST00000453046 TMPRSS4Q9NRS4 437 aa18.42■□□□□ 0.54
SQSTM1-204ENST00000453046 MPP6Q9NZW5 540 aa18.42■□□□□ 0.54
SQSTM1-204ENST00000453046 TMEM59LQ9UK28 342 aa18.42■□□□□ 0.54
SQSTM1-204ENST00000453046 FARP1Q9Y4F1 1045 aaPredicted RBP18.42■□□□□ 0.54
SQSTM1-204ENST00000453046 OR51B4Q9Y5P0 310 aa18.42■□□□□ 0.54
SQSTM1-204ENST00000453046 KNL1Q8NG31 2342 aa18.41■□□□□ 0.54
SQSTM1-204ENST00000453046 GRID2IPA4D2P6 1211 aa18.41■□□□□ 0.54
SQSTM1-204ENST00000453046 DRGXA6NNA5 263 aa18.41■□□□□ 0.54
SQSTM1-204ENST00000453046 E9PAM4 449 aa18.41■□□□□ 0.54
SQSTM1-204ENST00000453046 C1QTNF3-AMACRE9PGA6 284 aa18.41■□□□□ 0.54
SQSTM1-204ENST00000453046 I6L893 689 aaPredicted RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms