RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 PGLYRP2Q96PD5 576 aa2.41□□□□□ -2.02
LRCH3-209ENST00000452660 TEFMQ96QE5 360 aaKnown RBP2.41□□□□□ -2.02
LRCH3-209ENST00000452660 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.41□□□□□ -2.02
LRCH3-209ENST00000452660 EVA1AQ9H8M9 152 aa2.41□□□□□ -2.02
LRCH3-209ENST00000452660 LIN7CQ9NUP9 197 aaKnown RBP2.41□□□□□ -2.02
LRCH3-209ENST00000452660 OCIAD1Q9NX40 245 aa2.41□□□□□ -2.02
LRCH3-209ENST00000452660 FBXO40Q9UH90 709 aa2.41□□□□□ -2.02
LRCH3-209ENST00000452660 MORC2Q9Y6X9 1032 aaPredicted RBP2.41□□□□□ -2.02
LRCH3-209ENST00000452660 LINC01553A4QN01 128 aa2.4□□□□□ -2.03
LRCH3-209ENST00000452660 EFCAB8A8MWE9 144 aa2.4□□□□□ -2.03
LRCH3-209ENST00000452660 FAM157AC9JC47 383 aa2.4□□□□□ -2.03
LRCH3-209ENST00000452660 FAM72CH0Y354 149 aa2.4□□□□□ -2.03
LRCH3-209ENST00000452660 EDIL3O43854 480 aa2.4□□□□□ -2.03
LRCH3-209ENST00000452660 KRT5P13647 590 aa2.4□□□□□ -2.03
LRCH3-209ENST00000452660 SLC5A1P13866 664 aa2.4□□□□□ -2.03
LRCH3-209ENST00000452660 DGKAP23743 735 aa2.4□□□□□ -2.03
LRCH3-209ENST00000452660 FMO4P31512 558 aa2.4□□□□□ -2.03
LRCH3-209ENST00000452660 CDKN1AP38936 164 aa2.4□□□□□ -2.03
LRCH3-209ENST00000452660 GPR12P47775 334 aa2.4□□□□□ -2.03
LRCH3-209ENST00000452660 FAM3BP58499 235 aaPredicted RBP2.4□□□□□ -2.03
LRCH3-209ENST00000452660 ARL16Q0P5N6 197 aa2.4□□□□□ -2.03
LRCH3-209ENST00000452660 HDAC1Q13547 482 aaPredicted RBP2.4□□□□□ -2.03
LRCH3-209ENST00000452660 ARL13AQ5H913 290 aaPredicted RBP2.4□□□□□ -2.03
LRCH3-209ENST00000452660 FAM72AQ5TYM5 149 aa2.4□□□□□ -2.03
LRCH3-209ENST00000452660 FAM72DQ6L9T8 149 aa2.4□□□□□ -2.03
LRCH3-209ENST00000452660 RINT1Q6NUQ1 792 aa2.4□□□□□ -2.03
LRCH3-209ENST00000452660 HIBCHQ6NVY1 386 aaPredicted RBP2.4□□□□□ -2.03
LRCH3-209ENST00000452660 UNQ6126/PRO20091Q6UXV3 157 aa2.4□□□□□ -2.03
LRCH3-209ENST00000452660 TUBA1AQ71U36 451 aa2.4□□□□□ -2.03
LRCH3-209ENST00000452660 FAM72BQ86X60 149 aa2.4□□□□□ -2.03
LRCH3-209ENST00000452660 SORCS1Q8WY21 1168 aa2.4□□□□□ -2.03
LRCH3-209ENST00000452660 JDP2Q8WYK2 163 aa2.4□□□□□ -2.03
LRCH3-209ENST00000452660 ZNF566Q969W8 418 aa2.4□□□□□ -2.03
LRCH3-209ENST00000452660 SCMH1Q96GD3 660 aa2.4□□□□□ -2.03
LRCH3-209ENST00000452660 FEM1CQ96JP0 617 aa2.4□□□□□ -2.03
LRCH3-209ENST00000452660 TUBA1CQ9BQE3 449 aa2.4□□□□□ -2.03
LRCH3-209ENST00000452660 TMLHEQ9NVH6 421 aa2.4□□□□□ -2.03
LRCH3-209ENST00000452660 HERC5Q9UII4 1024 aaKnown RBP2.4□□□□□ -2.03
LRCH3-209ENST00000452660 RAB21Q9UL25 225 aa2.4□□□□□ -2.03
LRCH3-209ENST00000452660 GAB2Q9UQC2 676 aa2.4□□□□□ -2.03
LRCH3-209ENST00000452660 TCRBV7S3A2A0A539 114 aa2.39□□□□□ -2.03
LRCH3-209ENST00000452660 HNRNPRO43390 633 aaKnown RBP2.39□□□□□ -2.03
LRCH3-209ENST00000452660 CCNT1O60563 726 aaKnown RBP2.39□□□□□ -2.03
LRCH3-209ENST00000452660 LMX1BO60663 402 aa2.39□□□□□ -2.03
LRCH3-209ENST00000452660 PLA2G6O60733 806 aa2.39□□□□□ -2.03
LRCH3-209ENST00000452660 CLDN7O95471 211 aa2.39□□□□□ -2.03
LRCH3-209ENST00000452660 DDAH2O95865 285 aa2.39□□□□□ -2.03
LRCH3-209ENST00000452660 LDLRP01130 860 aa2.39□□□□□ -2.03
LRCH3-209ENST00000452660 IGHV4-30-4P0DP06 118 aa2.39□□□□□ -2.03
LRCH3-209ENST00000452660 HARSP12081 509 aaKnown RBP2.39□□□□□ -2.03
LRCH3-209ENST00000452660 PRPH2P23942 346 aa2.39□□□□□ -2.03
LRCH3-209ENST00000452660 TM4SF4P48230 202 aa2.39□□□□□ -2.03
LRCH3-209ENST00000452660 RCAN1P53805 252 aa2.39□□□□□ -2.03
LRCH3-209ENST00000452660 ERVK11-1P61568 191 aa2.39□□□□□ -2.03
LRCH3-209ENST00000452660 SF3A3Q12874 501 aaKnown RBP eCLIP2.39□□□□□ -2.03
LRCH3-209ENST00000452660 DMP1Q13316 513 aaPredicted RBP2.39□□□□□ -2.03
LRCH3-209ENST00000452660 PMS2P11Q13670 270 aa2.39□□□□□ -2.03
LRCH3-209ENST00000452660 HLTFQ14527 1009 aaKnown RBP eCLIP2.39□□□□□ -2.03
LRCH3-209ENST00000452660 STPG1Q5TH74 334 aa2.39□□□□□ -2.03
LRCH3-209ENST00000452660 TMEM268Q5VZI3 342 aa2.39□□□□□ -2.03
LRCH3-209ENST00000452660 FOXL2NBQ6ZUU3 175 aa2.39□□□□□ -2.03
LRCH3-209ENST00000452660 GALNT7Q86SF2 657 aa2.39□□□□□ -2.03
LRCH3-209ENST00000452660 WDR5BQ86VZ2 330 aa2.39□□□□□ -2.03
LRCH3-209ENST00000452660 GATAD2AQ86YP4 633 aa2.39□□□□□ -2.03
LRCH3-209ENST00000452660 TMEM18Q96B42 140 aa2.39□□□□□ -2.03
LRCH3-209ENST00000452660 IFT27Q9BW83 186 aa2.39□□□□□ -2.03
LRCH3-209ENST00000452660 STK33Q9BYT3 514 aa2.39□□□□□ -2.03
LRCH3-209ENST00000452660 IGHV4OR15-8A0A075B7B6 117 aa2.38□□□□□ -2.03
LRCH3-209ENST00000452660 DYTNA2CJ06 578 aa2.38□□□□□ -2.03
LRCH3-209ENST00000452660 ERI2A8K979 691 aaKnown RBP2.38□□□□□ -2.03
LRCH3-209ENST00000452660 PRAC2D3DTV9 90 aa2.38□□□□□ -2.03
LRCH3-209ENST00000452660 MYF6P23409 242 aa2.38□□□□□ -2.03
LRCH3-209ENST00000452660 YWHAQP27348 245 aa2.38□□□□□ -2.03
LRCH3-209ENST00000452660 GSTM2P28161 218 aa2.38□□□□□ -2.03
LRCH3-209ENST00000452660 PHEXP78562 749 aa2.38□□□□□ -2.03
LRCH3-209ENST00000452660 PMP22Q01453 160 aa2.38□□□□□ -2.03
LRCH3-209ENST00000452660 MYBPHQ13203 477 aa2.38□□□□□ -2.03
LRCH3-209ENST00000452660 ALKBH1Q13686 389 aaKnown RBP2.38□□□□□ -2.03
LRCH3-209ENST00000452660 CALCRLQ16602 461 aa2.38□□□□□ -2.03
LRCH3-209ENST00000452660 SYTL3Q4VX76 610 aa2.38□□□□□ -2.03
LRCH3-209ENST00000452660 FAM209BQ5JX69 171 aa2.38□□□□□ -2.03
LRCH3-209ENST00000452660 IZUMO3Q5VZ72 239 aa2.38□□□□□ -2.03
LRCH3-209ENST00000452660 FAM122CQ6P4D5 195 aa2.38□□□□□ -2.03
LRCH3-209ENST00000452660 GDPD4Q6W3E5 623 aa2.38□□□□□ -2.03
LRCH3-209ENST00000452660 TRMT1LQ7Z2T5 733 aaKnown RBP2.38□□□□□ -2.03
LRCH3-209ENST00000452660 MIGA1Q8NAN2 632 aa2.38□□□□□ -2.03
LRCH3-209ENST00000452660 ZMIZ2Q8NF64 920 aa2.38□□□□□ -2.03
LRCH3-209ENST00000452660 CTCFLQ8NI51 663 aaPredicted RBP2.38□□□□□ -2.03
LRCH3-209ENST00000452660 CLEC4CQ8WTT0 213 aa2.38□□□□□ -2.03
LRCH3-209ENST00000452660 FBXO17Q96EF6 278 aa2.38□□□□□ -2.03
LRCH3-209ENST00000452660 TXNDC15Q96J42 360 aa2.38□□□□□ -2.03
LRCH3-209ENST00000452660 CADM1Q9BY67 442 aaKnown RBP2.38□□□□□ -2.03
LRCH3-209ENST00000452660 PDE11AQ9HCR9 933 aa2.38□□□□□ -2.03
LRCH3-209ENST00000452660 CHST12Q9NRB3 414 aa2.38□□□□□ -2.03
LRCH3-209ENST00000452660 A0A096LPK6 155 aa2.37□□□□□ -2.03
LRCH3-209ENST00000452660 FAM90A18PA6NE21 464 aa2.37□□□□□ -2.03
LRCH3-209ENST00000452660 FAM90A16PA6NEW6 464 aa2.37□□□□□ -2.03
LRCH3-209ENST00000452660 FAM90A9PA6NNJ1 464 aa2.37□□□□□ -2.03
LRCH3-209ENST00000452660 FAM90A5PA8MXJ8 464 aa2.37□□□□□ -2.03
LRCH3-209ENST00000452660 KIF28PB7ZC32 967 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms