RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 CCDC185Q8N715 623 aa12.75□□□□□ -0.37
CPSF4-208ENST00000452047 CHST14Q8NCH0 376 aa12.75□□□□□ -0.37
CPSF4-208ENST00000452047 TMIEQ8NEW7 156 aa12.75□□□□□ -0.37
CPSF4-208ENST00000452047 FAM172AQ8WUF8 416 aa12.75□□□□□ -0.37
CPSF4-208ENST00000452047 BAP1Q92560 729 aa12.75□□□□□ -0.37
CPSF4-208ENST00000452047 NTAN1Q96AB6 310 aa12.75□□□□□ -0.37
CPSF4-208ENST00000452047 ARRDC3Q96B67 414 aa12.75□□□□□ -0.37
CPSF4-208ENST00000452047 SERAC1Q96JX3 654 aa12.75□□□□□ -0.37
CPSF4-208ENST00000452047 CCDC114Q96M63 670 aa12.75□□□□□ -0.37
CPSF4-208ENST00000452047 AGPAT1Q99943 283 aa12.75□□□□□ -0.37
CPSF4-208ENST00000452047 SELENOOQ9BVL4 669 aa12.75□□□□□ -0.37
CPSF4-208ENST00000452047 MAGEB5Q9BZ81 275 aa12.75□□□□□ -0.37
CPSF4-208ENST00000452047 TNKS2Q9H2K2 1166 aa12.75□□□□□ -0.37
CPSF4-208ENST00000452047 RETREG1Q9H6L5 497 aa12.75□□□□□ -0.37
CPSF4-208ENST00000452047 PREBQ9HCU5 417 aa12.75□□□□□ -0.37
CPSF4-208ENST00000452047 ATP13A1Q9HD20 1204 aa12.75□□□□□ -0.37
CPSF4-208ENST00000452047 AASDHPPTQ9NRN7 309 aa12.75□□□□□ -0.37
CPSF4-208ENST00000452047 PLXNB3Q9ULL4 1909 aa12.75□□□□□ -0.37
CPSF4-208ENST00000452047 FARP1Q9Y4F1 1045 aaPredicted RBP12.75□□□□□ -0.37
CPSF4-208ENST00000452047 CXorf51AA0A1B0GTR3 108 aa12.74□□□□□ -0.37
CPSF4-208ENST00000452047 SIGLEC16A6NMB1 481 aa12.74□□□□□ -0.37
CPSF4-208ENST00000452047 KPNA3O00505 521 aaPredicted RBP12.74□□□□□ -0.37
CPSF4-208ENST00000452047 DFNA5O60443 496 aa12.74□□□□□ -0.37
CPSF4-208ENST00000452047 LRIG2O94898 1065 aa12.74□□□□□ -0.37
CPSF4-208ENST00000452047 FERP16591 822 aa12.74□□□□□ -0.37
CPSF4-208ENST00000452047 RHOQP17081 205 aa12.74□□□□□ -0.37
CPSF4-208ENST00000452047 GPD1P21695 349 aa12.74□□□□□ -0.37
CPSF4-208ENST00000452047 MAT2AP31153 395 aaKnown RBP12.74□□□□□ -0.37
CPSF4-208ENST00000452047 NUDT1P36639 197 aa12.74□□□□□ -0.37
CPSF4-208ENST00000452047 ACVRL1P37023 503 aa12.74□□□□□ -0.37
CPSF4-208ENST00000452047 GRK6P43250 576 aa12.74□□□□□ -0.37
CPSF4-208ENST00000452047 MAPKAPK2P49137 400 aa12.74□□□□□ -0.37
CPSF4-208ENST00000452047 IL9RQ01113 521 aa12.74□□□□□ -0.37
CPSF4-208ENST00000452047 SUZ12Q15022 739 aaKnown RBP12.74□□□□□ -0.37
CPSF4-208ENST00000452047 SHBQ15464 509 aa12.74□□□□□ -0.37
CPSF4-208ENST00000452047 PPP1R15BQ5SWA1 713 aa12.74□□□□□ -0.37
CPSF4-208ENST00000452047 RETSATQ6NUM9 610 aa12.74□□□□□ -0.37
CPSF4-208ENST00000452047 DPY19L3Q6ZPD9 716 aa12.74□□□□□ -0.37
CPSF4-208ENST00000452047 IRF2BP2Q7Z5L9 587 aa12.74□□□□□ -0.37
CPSF4-208ENST00000452047 PNPLA1Q8N8W4 532 aa12.74□□□□□ -0.37
CPSF4-208ENST00000452047 KDF1Q8NAX2 398 aaPredicted RBP12.74□□□□□ -0.37
CPSF4-208ENST00000452047 RHBDD1Q8TEB9 315 aa12.74□□□□□ -0.37
CPSF4-208ENST00000452047 SKA1Q96BD8 255 aa12.74□□□□□ -0.37
CPSF4-208ENST00000452047 ELF4Q99607 663 aaPredicted RBP12.74□□□□□ -0.37
CPSF4-208ENST00000452047 CDC6Q99741 560 aa12.74□□□□□ -0.37
CPSF4-208ENST00000452047 SPON2Q9BUD6 331 aa12.74□□□□□ -0.37
CPSF4-208ENST00000452047 CEP44Q9C0F1 390 aa12.74□□□□□ -0.37
CPSF4-208ENST00000452047 NAT10Q9H0A0 1025 aaKnown RBP12.74□□□□□ -0.37
CPSF4-208ENST00000452047 RTN4Q9NQC3 1192 aaKnown RBP12.74□□□□□ -0.37
CPSF4-208ENST00000452047 SEPT11Q9NVA2 429 aaKnown RBP12.74□□□□□ -0.37
CPSF4-208ENST00000452047 TMEM248Q9NWD8 314 aa12.74□□□□□ -0.37
CPSF4-208ENST00000452047 MYO6Q9UM54 1294 aa12.74□□□□□ -0.37
CPSF4-208ENST00000452047 DMTF1Q9Y222 760 aa12.74□□□□□ -0.37
CPSF4-208ENST00000452047 APOBEC2Q9Y235 224 aaKnown RBP12.74□□□□□ -0.37
CPSF4-208ENST00000452047 WASF2Q9Y6W5 498 aa12.74□□□□□ -0.37
CPSF4-208ENST00000452047 NBEAQ8NFP9 2946 aa12.73□□□□□ -0.37
CPSF4-208ENST00000452047 ANKRD11Q6UB99 2663 aaPredicted RBP12.73□□□□□ -0.37
CPSF4-208ENST00000452047 TMEM8BA6NDV4 472 aa12.73□□□□□ -0.37
CPSF4-208ENST00000452047 TLR4O00206 839 aa12.73□□□□□ -0.37
CPSF4-208ENST00000452047 CCP110O43303 1012 aa12.73□□□□□ -0.37
CPSF4-208ENST00000452047 PRNPP04156 253 aa12.73□□□□□ -0.37
CPSF4-208ENST00000452047 PLEKP08567 350 aaPredicted RBP12.73□□□□□ -0.37
CPSF4-208ENST00000452047 ATXN1LP0C7T5 689 aaKnown RBP12.73□□□□□ -0.37
CPSF4-208ENST00000452047 ETFBP38117 255 aa12.73□□□□□ -0.37
CPSF4-208ENST00000452047 ZNF143P52747 638 aaPredicted RBP12.73□□□□□ -0.37
CPSF4-208ENST00000452047 NXPH1P58417 271 aa12.73□□□□□ -0.37
CPSF4-208ENST00000452047 RPL7AP62424 266 aaKnown RBP12.73□□□□□ -0.37
CPSF4-208ENST00000452047 SLC20A2Q08357 652 aa12.73□□□□□ -0.37
CPSF4-208ENST00000452047 ARSIQ5FYB1 569 aa12.73□□□□□ -0.37
CPSF4-208ENST00000452047 PRAMEF14Q5SWL7 426 aa12.73□□□□□ -0.37
CPSF4-208ENST00000452047 RWDD4Q6NW29 188 aaKnown RBP12.73□□□□□ -0.37
CPSF4-208ENST00000452047 DNAJC24Q6P3W2 148 aa12.73□□□□□ -0.37
CPSF4-208ENST00000452047 PRPF39Q86UA1 669 aaKnown RBP12.73□□□□□ -0.37
CPSF4-208ENST00000452047 PCDH20Q8N6Y1 951 aaKnown RBP12.73□□□□□ -0.37
CPSF4-208ENST00000452047 MFSD2AQ8NA29 543 aa12.73□□□□□ -0.37
CPSF4-208ENST00000452047 GRIN3AQ8TCU5 1115 aa12.73□□□□□ -0.37
CPSF4-208ENST00000452047 ARHGEF2Q92974 986 aaKnown RBP12.73□□□□□ -0.37
CPSF4-208ENST00000452047 TBC1D31Q96DN5 1066 aa12.73□□□□□ -0.37
CPSF4-208ENST00000452047 MCEEQ96PE7 176 aa12.73□□□□□ -0.37
CPSF4-208ENST00000452047 FUCA2Q9BTY2 467 aa12.73□□□□□ -0.37
CPSF4-208ENST00000452047 HDAC8Q9BY41 377 aa12.73□□□□□ -0.37
CPSF4-208ENST00000452047 GDF3Q9NR23 364 aa12.73□□□□□ -0.37
CPSF4-208ENST00000452047 TAS2R14Q9NYV8 317 aa12.73□□□□□ -0.37
CPSF4-208ENST00000452047 IL36AQ9UHA7 158 aa12.73□□□□□ -0.37
CPSF4-208ENST00000452047 ACTL7AQ9Y615 435 aa12.73□□□□□ -0.37
CPSF4-208ENST00000452047 ITPR1Q14643 2758 aa12.73□□□□□ -0.37
CPSF4-208ENST00000452047 PKD1L2Q7Z442 2459 aa12.72□□□□□ -0.37
CPSF4-208ENST00000452047 LEFTY1O75610 366 aa12.72□□□□□ -0.37
CPSF4-208ENST00000452047 CCDC172P0C7W6 258 aa12.72□□□□□ -0.37
CPSF4-208ENST00000452047 L1CAMP32004 1257 aa12.72□□□□□ -0.37
CPSF4-208ENST00000452047 RECQLP46063 649 aaPredicted RBP12.72□□□□□ -0.37
CPSF4-208ENST00000452047 CCNHP51946 323 aaPredicted RBP12.72□□□□□ -0.37
CPSF4-208ENST00000452047 OGDHQ02218 1023 aa12.72□□□□□ -0.37
CPSF4-208ENST00000452047 SETMARQ53H47 684 aaPredicted RBP12.72□□□□□ -0.37
CPSF4-208ENST00000452047 E4F1Q66K89 784 aaPredicted RBP12.72□□□□□ -0.37
CPSF4-208ENST00000452047 ACAD10Q6JQN1 1059 aa12.72□□□□□ -0.37
CPSF4-208ENST00000452047 CAVIN1Q6NZI2 390 aaKnown RBP12.72□□□□□ -0.37
CPSF4-208ENST00000452047 NEK5Q6P3R8 708 aa12.72□□□□□ -0.37
CPSF4-208ENST00000452047 ERN2Q76MJ5 926 aaKnown RBP12.72□□□□□ -0.37
CPSF4-208ENST00000452047 SLFN11Q7Z7L1 901 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms