RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 PCSK1NQ9UHG2 260 aa9.89□□□□□ -0.83
USP54-207ENST00000451492 ADAMTS1Q9UHI8 967 aa9.89□□□□□ -0.83
USP54-207ENST00000451492 CA5BQ9Y2D0 317 aa9.89□□□□□ -0.83
USP54-207ENST00000451492 A0A1W2PQC6 194 aa9.88□□□□□ -0.83
USP54-207ENST00000451492 TCRBV5S1A1TA0A578 114 aa9.88□□□□□ -0.83
USP54-207ENST00000451492 H0Y8X5 98 aa9.88□□□□□ -0.83
USP54-207ENST00000451492 ALOX15BO15296 676 aa9.88□□□□□ -0.83
USP54-207ENST00000451492 PLRG1O43660 514 aaKnown RBP9.88□□□□□ -0.83
USP54-207ENST00000451492 HYAL3O43820 417 aaPredicted RBP9.88□□□□□ -0.83
USP54-207ENST00000451492 RAMP2O60895 175 aa9.88□□□□□ -0.83
USP54-207ENST00000451492 RNGTTO60942 597 aaKnown RBP9.88□□□□□ -0.83
USP54-207ENST00000451492 WNT1P04628 370 aa9.88□□□□□ -0.83
USP54-207ENST00000451492 PRLRP16471 622 aa9.88□□□□□ -0.83
USP54-207ENST00000451492 RHOQP17081 205 aa9.88□□□□□ -0.83
USP54-207ENST00000451492 CD38P28907 300 aa9.88□□□□□ -0.83
USP54-207ENST00000451492 EPHB2P29323 1055 aa9.88□□□□□ -0.83
USP54-207ENST00000451492 GKP32189 559 aa9.88□□□□□ -0.83
USP54-207ENST00000451492 MAPKAPK2P49137 400 aa9.88□□□□□ -0.83
USP54-207ENST00000451492 CCNHP51946 323 aaPredicted RBP9.88□□□□□ -0.83
USP54-207ENST00000451492 UBASH3AP57075 661 aa9.88□□□□□ -0.83
USP54-207ENST00000451492 ZSCAN23Q3MJ62 389 aa9.88□□□□□ -0.83
USP54-207ENST00000451492 CCDC157Q569K6 752 aa9.88□□□□□ -0.83
USP54-207ENST00000451492 ARSIQ5FYB1 569 aa9.88□□□□□ -0.83
USP54-207ENST00000451492 PPP1R15BQ5SWA1 713 aa9.88□□□□□ -0.83
USP54-207ENST00000451492 RETSATQ6NUM9 610 aa9.88□□□□□ -0.83
USP54-207ENST00000451492 IL27RAQ6UWB1 636 aa9.88□□□□□ -0.83
USP54-207ENST00000451492 NLRP14Q86W24 1093 aa9.88□□□□□ -0.83
USP54-207ENST00000451492 PNPLA1Q8N8W4 532 aa9.88□□□□□ -0.83
USP54-207ENST00000451492 CENPIQ92674 756 aaPredicted RBP9.88□□□□□ -0.83
USP54-207ENST00000451492 ARHGEF2Q92974 986 aaKnown RBP9.88□□□□□ -0.83
USP54-207ENST00000451492 NTAN1Q96AB6 310 aa9.88□□□□□ -0.83
USP54-207ENST00000451492 ORAI3Q9BRQ5 295 aa9.88□□□□□ -0.83
USP54-207ENST00000451492 CNPY3Q9BT09 278 aa9.88□□□□□ -0.83
USP54-207ENST00000451492 SYT11Q9BT88 431 aa9.88□□□□□ -0.83
USP54-207ENST00000451492 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.88□□□□□ -0.83
USP54-207ENST00000451492 TRIM7Q9C029 511 aa9.88□□□□□ -0.83
USP54-207ENST00000451492 TTYH3Q9C0H2 523 aa9.88□□□□□ -0.83
USP54-207ENST00000451492 OSBPL2Q9H1P3 480 aa9.88□□□□□ -0.83
USP54-207ENST00000451492 TMEM248Q9NWD8 314 aa9.88□□□□□ -0.83
USP54-207ENST00000451492 IFNKQ9P0W0 207 aa9.88□□□□□ -0.83
USP54-207ENST00000451492 CNOT8Q9UFF9 292 aaKnown RBP9.88□□□□□ -0.83
USP54-207ENST00000451492 PPM1HQ9ULR3 514 aa9.88□□□□□ -0.83
USP54-207ENST00000451492 FZD10Q9ULW2 581 aa9.88□□□□□ -0.83
USP54-207ENST00000451492 MYO6Q9UM54 1294 aa9.88□□□□□ -0.83
USP54-207ENST00000451492 AP4E1Q9UPM8 1137 aa9.88□□□□□ -0.83
USP54-207ENST00000451492 BTBD3Q9Y2F9 522 aa9.88□□□□□ -0.83
USP54-207ENST00000451492 ASPMQ8IZT6 3477 aa9.87□□□□□ -0.83
USP54-207ENST00000451492 TRPM6Q9BX84 2022 aa9.87□□□□□ -0.83
USP54-207ENST00000451492 CNOT1A5YKK6 2376 aaKnown RBP9.87□□□□□ -0.83
USP54-207ENST00000451492 AKAP13Q12802 2813 aa9.87□□□□□ -0.83
USP54-207ENST00000451492 DDX3XO00571 662 aaKnown RBP eCLIP9.87□□□□□ -0.83
USP54-207ENST00000451492 ZMPSTE24O75844 475 aa9.87□□□□□ -0.83
USP54-207ENST00000451492 PCDH8O95206 1070 aa9.87□□□□□ -0.83
USP54-207ENST00000451492 FTLP02792 175 aaPredicted RBP9.87□□□□□ -0.83
USP54-207ENST00000451492 PRNPP04156 253 aa9.87□□□□□ -0.83
USP54-207ENST00000451492 C7P10643 843 aa9.87□□□□□ -0.83
USP54-207ENST00000451492 VASPP50552 380 aaPredicted RBP9.87□□□□□ -0.83
USP54-207ENST00000451492 CCT8P50990 548 aa9.87□□□□□ -0.83
USP54-207ENST00000451492 CCR5P51681 352 aa9.87□□□□□ -0.83
USP54-207ENST00000451492 CLCN6P51797 869 aa9.87□□□□□ -0.83
USP54-207ENST00000451492 TPI1P60174 286 aa9.87□□□□□ -0.83
USP54-207ENST00000451492 RACK1P63244 317 aaKnown RBP9.87□□□□□ -0.83
USP54-207ENST00000451492 NRG1Q02297 640 aaPredicted RBP9.87□□□□□ -0.83
USP54-207ENST00000451492 MAMLD1Q13495 774 aa9.87□□□□□ -0.83
USP54-207ENST00000451492 NR1I3Q14994 352 aa9.87□□□□□ -0.83
USP54-207ENST00000451492 POLD3Q15054 466 aaPredicted RBP9.87□□□□□ -0.83
USP54-207ENST00000451492 TRIP6Q15654 476 aaKnown RBP9.87□□□□□ -0.83
USP54-207ENST00000451492 CA9Q16790 459 aa9.87□□□□□ -0.83
USP54-207ENST00000451492 LRRC73Q5JTD7 316 aa9.87□□□□□ -0.83
USP54-207ENST00000451492 ATXN7L2Q5T6C5 722 aaPredicted RBP9.87□□□□□ -0.83
USP54-207ENST00000451492 PIP5KL1Q5T9C9 394 aa9.87□□□□□ -0.83
USP54-207ENST00000451492 ZNF783Q6ZMS7 281 aa9.87□□□□□ -0.83
USP54-207ENST00000451492 PRPF39Q86UA1 669 aaKnown RBP9.87□□□□□ -0.83
USP54-207ENST00000451492 GATAD2AQ86YP4 633 aa9.87□□□□□ -0.83
USP54-207ENST00000451492 PPP1R16AQ96I34 528 aa9.87□□□□□ -0.83
USP54-207ENST00000451492 CELF6Q96J87 481 aaKnown RBP9.87□□□□□ -0.83
USP54-207ENST00000451492 EXOC2Q96KP1 924 aa9.87□□□□□ -0.83
USP54-207ENST00000451492 PEBP4Q96S96 227 aa9.87□□□□□ -0.83
USP54-207ENST00000451492 EPAS1Q99814 870 aa9.87□□□□□ -0.83
USP54-207ENST00000451492 SCNM1Q9BWG6 230 aa9.87□□□□□ -0.83
USP54-207ENST00000451492 KLC2Q9H0B6 622 aa9.87□□□□□ -0.83
USP54-207ENST00000451492 DHX35Q9H5Z1 703 aaKnown RBP9.87□□□□□ -0.83
USP54-207ENST00000451492 PARVAQ9NVD7 372 aa9.87□□□□□ -0.83
USP54-207ENST00000451492 TMEM51Q9NW97 253 aa9.87□□□□□ -0.83
USP54-207ENST00000451492 HPCAL4Q9UM19 191 aa9.87□□□□□ -0.83
USP54-207ENST00000451492 A0A1W2PQU0 124 aa9.86□□□□□ -0.83
USP54-207ENST00000451492 UPK3BL1B0FP48 263 aa9.86□□□□□ -0.83
USP54-207ENST00000451492 C1QTNF9BB2RNN3 333 aa9.86□□□□□ -0.83
USP54-207ENST00000451492 UPK3BL2E5RIL1 263 aa9.86□□□□□ -0.83
USP54-207ENST00000451492 KRIT1O00522 736 aa9.86□□□□□ -0.83
USP54-207ENST00000451492 SLC31A1O15431 190 aa9.86□□□□□ -0.83
USP54-207ENST00000451492 SLC7A4O43246 635 aa9.86□□□□□ -0.83
USP54-207ENST00000451492 BUB1O43683 1085 aa9.86□□□□□ -0.83
USP54-207ENST00000451492 ZNF821O75541 412 aaPredicted RBP9.86□□□□□ -0.83
USP54-207ENST00000451492 CD160O95971 181 aa9.86□□□□□ -0.83
USP54-207ENST00000451492 FTH1P19P0C7X4 201 aa9.86□□□□□ -0.83
USP54-207ENST00000451492 C1QTNF9P0C862 333 aa9.86□□□□□ -0.83
USP54-207ENST00000451492 PTMSP20962 102 aa9.86□□□□□ -0.83
USP54-207ENST00000451492 ETFBP38117 255 aa9.86□□□□□ -0.83
USP54-207ENST00000451492 CTSKP43235 329 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms