RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 DGKHQ86XP1 1220 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 RELL1Q8IUW5 271 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 HERC6Q8IVU3 1022 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 CFAP206Q8IYR0 622 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 PPM1KQ8N3J5 372 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 LSMEM1Q8N8F7 131 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 DNAAF3Q8N9W5 541 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 FAM47BQ8NA70 645 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 ATG16L2Q8NAA4 619 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 ZBTB38Q8NAP3 1195 aaPredicted RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 RDM1Q8NG50 284 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 OR7G3Q8NG95 312 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 OR5J2Q8NH18 312 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 AGR3Q8TD06 166 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 TCP10LQ8TDR4 215 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 C15orf40Q8WUR7 153 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 PTCD2Q8WV60 388 aaKnown RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 ASB15Q8WXK1 588 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 UPF1Q92900 1129 aaKnown RBP eCLIP2.23□□□□□ -2.05
USP53-202ENST00000450251 PEX13Q92968 403 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 HAVCR1Q96D42 359 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 ZDHHC12Q96GR4 267 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 SUCLG2Q96I99 432 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 ZNF597Q96LX8 424 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 EYA1Q99502 592 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 DDX50Q9BQ39 737 aaKnown RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 ZNF416Q9BWM5 594 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 WDR11Q9BZH6 1224 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 SENP6Q9GZR1 1112 aaPredicted RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 NEUROG2Q9H2A3 272 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 RSAD1Q9HA92 442 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 GPBP1L1Q9HC44 474 aaPredicted RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 ZFYVE28Q9HCC9 887 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 B3GNT2Q9NY97 397 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 GPRC5DQ9NZD1 345 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 COMMD9Q9P000 198 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 CYTH4Q9UIA0 394 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 NUDT5Q9UKK9 219 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 STUB1Q9UNE7 303 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 DOLKQ9UPQ8 538 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 NPHP4O75161 1426 aaPredicted RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 COL24A1Q17RW2 1714 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 A0A087WWV3 80 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 A0A087X1B8 175 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 KRBA1A5PL33 1030 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 C2orf71A6NGG8 1288 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 AQP12BA6NM10 295 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 E5RI56 91 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 TSTD3H0UI37 97 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 MRASO14807 208 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 RGS10O43665 173 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 SSNA1O43805 119 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 TLL1O43897 1013 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 MITFO75030 526 aaPredicted RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 MAFO75444 373 aaPredicted RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 SLC4A1P02730 911 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 PROCP04070 461 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 IFNA4P05014 189 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 POLBP06746 335 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 PLA2G4BP0C869 781 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 DBTP11182 482 aaKnown RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 OGNP20774 298 aaKnown RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 CD72P21854 359 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 STOMP27105 288 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 SLC7A1P30825 629 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 RPA3P35244 121 aaPredicted RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 GMPRP36959 345 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 ABCG1P45844 678 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 CLK3P49761 638 aaKnown RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 DGKQP52824 942 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 AP1S2P56377 157 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 GTF2IP78347 998 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 OVGP1Q12889 678 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 ZNF211Q13398 564 aaPredicted RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 DSG2Q14126 1118 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 GNA13Q14344 377 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 GALEQ14376 348 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 KRT33BQ14525 404 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 PDK2Q15119 407 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 CCDC85BQ15834 202 aaPredicted RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 RNASEH2BQ5TBB1 312 aaKnown RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 ARMC6Q6NXE6 501 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 PDXDC2PQ6P474 469 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 BHLHB9Q6PI77 547 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 TOM1L2Q6ZVM7 507 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 CREB3L2Q70SY1 520 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 MAEAQ7L5Y9 396 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 SH3RF1Q7Z6J0 888 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 FAM228AQ86W67 206 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 AQP12AQ8IXF9 295 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 CYP4X1Q8N118 509 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 ZNF276Q8N554 614 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 TMEM35BQ8NCS4 154 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 PPHLN1Q8NEY8 458 aaKnown RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 C1orf54Q8WWF1 131 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 HTRA1Q92743 480 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 MSANTD3Q96H12 275 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 NSMCE2Q96MF7 247 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 RIPOR3Q96MK2 946 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 SRPK1Q96SB4 655 aaKnown RBP2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms