RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 ARMCX6Q7L4S7 300 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 KIAA0907Q7Z7F0 614 aaPredicted RBP10.07□□□□□ -0.8
CCDC171-203ENST00000449575 KCTD6Q8NC69 237 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 CCDC26Q8TAB7 109 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 LRRN4Q8WUT4 740 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 PBXIP1Q96AQ6 731 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 CELF6Q96J87 481 aaKnown RBP10.07□□□□□ -0.8
CCDC171-203ENST00000449575 EPAS1Q99814 870 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 HERPUD2Q9BSE4 406 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 TBC1D30Q9Y2I9 924 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 SLC27A6Q9Y2P4 619 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 OR51B4Q9Y5P0 310 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 MAN2B1O00754 1011 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 SNAP91O60641 907 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 CLDN11O75508 207 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 RPSAP08865 295 aaKnown RBP10.07□□□□□ -0.8
CCDC171-203ENST00000449575 RHOQP17081 205 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 KDELR1P24390 212 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 TIE1P35590 1138 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 GRIA2P42262 883 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 WASP42768 502 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 KIR2DL1P43626 348 aaPredicted RBP10.07□□□□□ -0.8
CCDC171-203ENST00000449575 KRT81Q14533 505 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 EGFLAMQ63HQ2 1017 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 CHST9Q7L1S5 443 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 PSTKQ8IV42 348 aaKnown RBP10.07□□□□□ -0.8
CCDC171-203ENST00000449575 RHOT1Q8IXI2 618 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 ZNF366Q8N895 744 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 PCDH19Q8TAB3 1148 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 ITFG2Q969R8 447 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 SHDQ96IW2 340 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 RPL10LQ96L21 214 aaKnown RBP10.07□□□□□ -0.8
CCDC171-203ENST00000449575 FEM1AQ9BSK4 669 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 CIPCQ9C0C6 399 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 NOD2Q9HC29 1040 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 GDF3Q9NR23 364 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 TMEM248Q9NWD8 314 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 SIT1Q9Y3P8 196 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 ANKRD36A6QL64 1941 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 LAMA1P25391 3075 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 A0A0A0MRY4 1105 aa10.06□□□□□ -0.8
CCDC171-203ENST00000449575 TTC36A6NLP5 189 aa10.06□□□□□ -0.8
CCDC171-203ENST00000449575 DLL1O00548 723 aa10.06□□□□□ -0.8
CCDC171-203ENST00000449575 KRT1P04264 644 aa10.06□□□□□ -0.8
CCDC171-203ENST00000449575 APODP05090 189 aa10.06□□□□□ -0.8
CCDC171-203ENST00000449575 GSTA1P08263 222 aa10.06□□□□□ -0.8
CCDC171-203ENST00000449575 KRT7P08729 469 aa10.06□□□□□ -0.8
CCDC171-203ENST00000449575 KRT10P13645 584 aa10.06□□□□□ -0.8
CCDC171-203ENST00000449575 STK19P49842 368 aaPredicted RBP10.06□□□□□ -0.8
CCDC171-203ENST00000449575 PEX5P50542 639 aa10.06□□□□□ -0.8
CCDC171-203ENST00000449575 GRSF1Q12849 480 aaKnown RBP eCLIP10.06□□□□□ -0.8
CCDC171-203ENST00000449575 MTA1Q13330 715 aa10.06□□□□□ -0.8
CCDC171-203ENST00000449575 PDCD2Q16342 344 aaPredicted RBP10.06□□□□□ -0.8
CCDC171-203ENST00000449575 PLEKHG6Q3KR16 790 aa10.06□□□□□ -0.8
CCDC171-203ENST00000449575 PITRM1Q5JRX3 1037 aa10.06□□□□□ -0.8
CCDC171-203ENST00000449575 GKAP1Q5VSY0 366 aaPredicted RBP10.06□□□□□ -0.8
CCDC171-203ENST00000449575 TTC39BQ5VTQ0 682 aaPredicted RBP10.06□□□□□ -0.8
CCDC171-203ENST00000449575 DCAF12L1Q5VU92 463 aa10.06□□□□□ -0.8
CCDC171-203ENST00000449575 CAPRIN2Q6IMN6 1127 aaKnown RBP10.06□□□□□ -0.8
CCDC171-203ENST00000449575 RNF10Q8N5U6 811 aaKnown RBP10.06□□□□□ -0.8
CCDC171-203ENST00000449575 PQLC3Q8N755 202 aa10.06□□□□□ -0.8
CCDC171-203ENST00000449575 RTL3Q8N8U3 475 aaKnown RBP10.06□□□□□ -0.8
CCDC171-203ENST00000449575 TMEM105Q8N8V8 129 aa10.06□□□□□ -0.8
CCDC171-203ENST00000449575 PSMB7Q99436 277 aa10.06□□□□□ -0.8
CCDC171-203ENST00000449575 SLC2A11Q9BYW1 496 aa10.06□□□□□ -0.8
CCDC171-203ENST00000449575 MTG2Q9H4K7 406 aa10.06□□□□□ -0.8
CCDC171-203ENST00000449575 PPANQ9NQ55 473 aaKnown RBP10.06□□□□□ -0.8
CCDC171-203ENST00000449575 DLGAP2Q9P1A6 1054 aa10.06□□□□□ -0.8
CCDC171-203ENST00000449575 CFAP73A6NFT4 308 aa10.06□□□□□ -0.8
CCDC171-203ENST00000449575 DCLK1O15075 740 aa10.06□□□□□ -0.8
CCDC171-203ENST00000449575 DDX3YO15523 660 aaKnown RBP10.06□□□□□ -0.8
CCDC171-203ENST00000449575 RHOCP08134 193 aa10.06□□□□□ -0.8
CCDC171-203ENST00000449575 PECAM1P16284 738 aaPredicted RBP10.06□□□□□ -0.8
CCDC171-203ENST00000449575 DRD1P21728 446 aa10.06□□□□□ -0.8
CCDC171-203ENST00000449575 CTNNA1P35221 906 aaKnown RBP10.06□□□□□ -0.8
CCDC171-203ENST00000449575 FOXD4Q12950 439 aaPredicted RBP10.06□□□□□ -0.8
CCDC171-203ENST00000449575 ZNF211Q13398 564 aaPredicted RBP10.06□□□□□ -0.8
CCDC171-203ENST00000449575 PTPRNQ16849 979 aa10.06□□□□□ -0.8
CCDC171-203ENST00000449575 MBLAC2Q68D91 279 aa10.06□□□□□ -0.8
CCDC171-203ENST00000449575 ARHGAP36Q6ZRI8 547 aa10.06□□□□□ -0.8
CCDC171-203ENST00000449575 PEX26Q7Z412 305 aa10.06□□□□□ -0.8
CCDC171-203ENST00000449575 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.06□□□□□ -0.8
CCDC171-203ENST00000449575 EIF1ADQ8N9N8 165 aaKnown RBP10.06□□□□□ -0.8
CCDC171-203ENST00000449575 RPLP0P6Q8NHW5 317 aa10.06□□□□□ -0.8
CCDC171-203ENST00000449575 MYO19Q96H55 970 aa10.06□□□□□ -0.8
CCDC171-203ENST00000449575 SEC16BQ96JE7 1060 aa10.06□□□□□ -0.8
CCDC171-203ENST00000449575 OSBPL9Q96SU4 736 aa10.06□□□□□ -0.8
CCDC171-203ENST00000449575 MUC3BQ9H195 1237 aa10.06□□□□□ -0.8
CCDC171-203ENST00000449575 KIAA1522Q9P206 1035 aaPredicted RBP10.06□□□□□ -0.8
CCDC171-203ENST00000449575 C15orf41Q9Y2V0 281 aa10.06□□□□□ -0.8
CCDC171-203ENST00000449575 NUMA1Q14980 2115 aa10.06□□□□□ -0.8
CCDC171-203ENST00000449575 DAPK3O43293 454 aa10.05□□□□□ -0.8
CCDC171-203ENST00000449575 PSTPIP1O43586 416 aa10.05□□□□□ -0.8
CCDC171-203ENST00000449575 MT-CO1P00395 513 aa10.05□□□□□ -0.8
CCDC171-203ENST00000449575 MYZAPP0CAP1 466 aa10.05□□□□□ -0.8
CCDC171-203ENST00000449575 HNRNPLP14866 589 aaKnown RBP eCLIP10.05□□□□□ -0.8
CCDC171-203ENST00000449575 ARL4AP40617 200 aa10.05□□□□□ -0.8
CCDC171-203ENST00000449575 ELF3P78545 371 aaPredicted RBP10.05□□□□□ -0.8
CCDC171-203ENST00000449575 LRRC38Q5VT99 294 aa10.05□□□□□ -0.8
CCDC171-203ENST00000449575 LINGO4Q6UY18 593 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms