RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 IGFBP7Q16270 282 aa7.55□□□□□ -1.2
RBM39-218ENST00000449489 SGSM1Q2NKQ1 1148 aa7.55□□□□□ -1.2
RBM39-218ENST00000449489 MANEAQ5SRI9 462 aa7.55□□□□□ -1.2
RBM39-218ENST00000449489 FAM46CQ5VWP2 391 aa7.55□□□□□ -1.2
RBM39-218ENST00000449489 ALG1LQ6GMV1 187 aa7.55□□□□□ -1.2
RBM39-218ENST00000449489 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.55□□□□□ -1.2
RBM39-218ENST00000449489 RSRC2Q7L4I2 434 aaKnown RBP7.55□□□□□ -1.2
RBM39-218ENST00000449489 ABI3BPQ7Z7G0 1075 aa7.55□□□□□ -1.2
RBM39-218ENST00000449489 DSG4Q86SJ6 1040 aa7.55□□□□□ -1.2
RBM39-218ENST00000449489 DTX1Q86Y01 620 aa7.55□□□□□ -1.2
RBM39-218ENST00000449489 C12orf56Q8IXR9 622 aa7.55□□□□□ -1.2
RBM39-218ENST00000449489 XXYLT1Q8NBI6 393 aa7.55□□□□□ -1.2
RBM39-218ENST00000449489 ZNF507Q8TCN5 953 aa7.55□□□□□ -1.2
RBM39-218ENST00000449489 FBF1Q8TES7 1133 aa7.55□□□□□ -1.2
RBM39-218ENST00000449489 PTPRN2Q92932 1015 aa7.55□□□□□ -1.2
RBM39-218ENST00000449489 NAT6Q93015 286 aa7.55□□□□□ -1.2
RBM39-218ENST00000449489 PMEPA1Q969W9 287 aa7.55□□□□□ -1.2
RBM39-218ENST00000449489 CCDC127Q96BQ5 260 aa7.55□□□□□ -1.2
RBM39-218ENST00000449489 SPAG5Q96R06 1193 aa7.55□□□□□ -1.2
RBM39-218ENST00000449489 FGFBP2Q9BYJ0 223 aa7.55□□□□□ -1.2
RBM39-218ENST00000449489 ZCCHC2Q9C0B9 1178 aaKnown RBP7.55□□□□□ -1.2
RBM39-218ENST00000449489 DNAI2Q9GZS0 605 aa7.55□□□□□ -1.2
RBM39-218ENST00000449489 AGPAT3Q9NRZ7 376 aa7.55□□□□□ -1.2
RBM39-218ENST00000449489 GPR27Q9NS67 375 aa7.55□□□□□ -1.2
RBM39-218ENST00000449489 FAM49BQ9NUQ9 324 aa7.55□□□□□ -1.2
RBM39-218ENST00000449489 PANK4Q9NVE7 773 aa7.55□□□□□ -1.2
RBM39-218ENST00000449489 CGNQ9P2M7 1197 aaKnown RBP7.55□□□□□ -1.2
RBM39-218ENST00000449489 CCDC39Q9UFE4 941 aa7.55□□□□□ -1.2
RBM39-218ENST00000449489 INTS6Q9UL03 887 aaKnown RBP7.55□□□□□ -1.2
RBM39-218ENST00000449489 ERVW-1Q9UQF0 538 aa7.55□□□□□ -1.2
RBM39-218ENST00000449489 ZFC3H1O60293 1989 aaKnown RBP7.54□□□□□ -1.2
RBM39-218ENST00000449489 A0A1W2PQ27 194 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 A0A1W2PQ64 194 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 A0A1W2PQC6 194 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 PMS2P1A4D2B8 440 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 TTC34A8MYJ7 566 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.54□□□□□ -1.2
RBM39-218ENST00000449489 ALOX15BO15296 676 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 TGFB1I1O43294 461 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 IL1BP01584 269 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 C4BPAP04003 597 aaKnown RBP7.54□□□□□ -1.2
RBM39-218ENST00000449489 CSF2P04141 144 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 SNRPBP14678 240 aaKnown RBP7.54□□□□□ -1.2
RBM39-218ENST00000449489 IDEP14735 1019 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 NME1P15531 152 aaKnown RBP7.54□□□□□ -1.2
RBM39-218ENST00000449489 CD82P27701 267 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 ADORA2BP29275 332 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 UGT1A5P35504 534 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 PSMD8P48556 350 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 YWHAGP61981 247 aaKnown RBP eCLIP7.54□□□□□ -1.2
RBM39-218ENST00000449489 ECT2LQ008S8 904 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 KCNAB2Q13303 367 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 TGIF1Q15583 401 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 CDKN3Q16667 212 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 SKIDA1Q1XH10 827 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 AGBL4Q5VU57 503 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 GUSBP11Q6P575 273 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 BORAQ6PGQ7 559 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 EPM2AIP1Q7L775 607 aaPredicted RBP7.54□□□□□ -1.2
RBM39-218ENST00000449489 RAB11FIP2Q7L804 512 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 EFL1Q7Z2Z2 1120 aaKnown RBP7.54□□□□□ -1.2
RBM39-218ENST00000449489 ZNF438Q7Z4V0 828 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 TICAM1Q8IUC6 712 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 UNC45BQ8IWX7 931 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 CCDC65Q8IXS2 484 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 STK40Q8N2I9 435 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 FBXO39Q8N4B4 442 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 ZNF548Q8NEK5 533 aaPredicted RBP7.54□□□□□ -1.2
RBM39-218ENST00000449489 WFDC5Q8TCV5 224 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 TMEM174Q8WUU8 243 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 MIB2Q96AX9 1013 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 ARRDC3Q96B67 414 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 TMEM159Q96B96 161 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 TBATAQ96M53 351 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 BOCQ9BWV1 1114 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 NT5C1AQ9BXI3 368 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 CYP3A43Q9HB55 503 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 HMGXB4Q9UGU5 601 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 HS3ST3A1Q9Y663 406 aa7.54□□□□□ -1.2
RBM39-218ENST00000449489 SPTY2D1-AS1A0A0U1RR47 76 aa7.53□□□□□ -1.2
RBM39-218ENST00000449489 CPED1A4D0V7 1026 aa7.53□□□□□ -1.2
RBM39-218ENST00000449489 H3BM21 787 aa7.53□□□□□ -1.2
RBM39-218ENST00000449489 TBL1XO60907 577 aa7.53□□□□□ -1.2
RBM39-218ENST00000449489 RTN2O75298 545 aa7.53□□□□□ -1.2
RBM39-218ENST00000449489 MOCS3O95396 460 aa7.53□□□□□ -1.2
RBM39-218ENST00000449489 VNN1O95497 513 aa7.53□□□□□ -1.2
RBM39-218ENST00000449489 ZBED1O96006 694 aa7.53□□□□□ -1.2
RBM39-218ENST00000449489 ASS1P00966 412 aaKnown RBP7.53□□□□□ -1.2
RBM39-218ENST00000449489 IGLV3-27P01718 113 aa7.53□□□□□ -1.2
RBM39-218ENST00000449489 HNRNPA2B1P22626 353 aaKnown RBP7.53□□□□□ -1.2
RBM39-218ENST00000449489 MAT2AP31153 395 aaKnown RBP7.53□□□□□ -1.2
RBM39-218ENST00000449489 AKT2P31751 481 aa7.53□□□□□ -1.2
RBM39-218ENST00000449489 CCKBRP32239 447 aa7.53□□□□□ -1.2
RBM39-218ENST00000449489 NNMTP40261 264 aa7.53□□□□□ -1.2
RBM39-218ENST00000449489 ASPAP45381 313 aa7.53□□□□□ -1.2
RBM39-218ENST00000449489 SLC11A2P49281 568 aa7.53□□□□□ -1.2
RBM39-218ENST00000449489 SGSHP51688 502 aa7.53□□□□□ -1.2
RBM39-218ENST00000449489 SULT2A1Q06520 285 aa7.53□□□□□ -1.2
RBM39-218ENST00000449489 CCDC15Q0P6D6 951 aa7.53□□□□□ -1.2
RBM39-218ENST00000449489 BIRC3Q13489 604 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms