RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 SYCP2LQ5T4T6 812 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 TMEM215Q68D42 235 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 SORCS1Q8WY21 1168 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 ZNF599Q96NL3 588 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 VAT1Q99536 393 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 IL12RB2Q99665 862 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 RSPH14Q9UHP6 348 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 SLC25A13Q9UJS0 675 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 SLC27A6Q9Y2P4 619 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 FCF1Q9Y324 198 aaKnown RBP14.9□□□□□ -0.02
TNF-208ENST00000449264 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.89□□□□□ -0.03
TNF-208ENST00000449264 TMCC1O94876 653 aa14.89□□□□□ -0.03
TNF-208ENST00000449264 MT-CO1P00395 513 aa14.89□□□□□ -0.03
TNF-208ENST00000449264 NFKB1P19838 968 aa14.89□□□□□ -0.03
TNF-208ENST00000449264 PSMB4P28070 264 aa14.89□□□□□ -0.03
TNF-208ENST00000449264 SERPINH1P50454 418 aaKnown RBP14.89□□□□□ -0.03
TNF-208ENST00000449264 DMC1Q14565 340 aa14.89□□□□□ -0.03
TNF-208ENST00000449264 TRADDQ15628 312 aa14.89□□□□□ -0.03
TNF-208ENST00000449264 DUPD1Q68J44 220 aa14.89□□□□□ -0.03
TNF-208ENST00000449264 ITPRIPL1Q6GPH6 555 aa14.89□□□□□ -0.03
TNF-208ENST00000449264 ADHFE1Q8IWW8 467 aa14.89□□□□□ -0.03
TNF-208ENST00000449264 BBS5Q8N3I7 341 aa14.89□□□□□ -0.03
TNF-208ENST00000449264 CNTD1Q8N815 330 aa14.89□□□□□ -0.03
TNF-208ENST00000449264 TERB1Q8NA31 727 aa14.89□□□□□ -0.03
TNF-208ENST00000449264 ATP11CQ8NB49 1132 aa14.89□□□□□ -0.03
TNF-208ENST00000449264 WFIKKN2Q8TEU8 576 aa14.89□□□□□ -0.03
TNF-208ENST00000449264 CYB5D2Q8WUJ1 264 aa14.89□□□□□ -0.03
TNF-208ENST00000449264 FATE1Q969F0 183 aa14.89□□□□□ -0.03
TNF-208ENST00000449264 SNF8Q96H20 258 aa14.89□□□□□ -0.03
TNF-208ENST00000449264 EXOC2Q96KP1 924 aa14.89□□□□□ -0.03
TNF-208ENST00000449264 TEKT5Q96M29 485 aa14.89□□□□□ -0.03
TNF-208ENST00000449264 PNKPQ96T60 521 aa14.89□□□□□ -0.03
TNF-208ENST00000449264 HEBP1Q9NRV9 189 aa14.89□□□□□ -0.03
TNF-208ENST00000449264 RAB6BQ9NRW1 208 aa14.89□□□□□ -0.03
TNF-208ENST00000449264 SEPT3Q9UH03 358 aa14.89□□□□□ -0.03
TNF-208ENST00000449264 TRHDEQ9UKU6 1024 aa14.89□□□□□ -0.03
TNF-208ENST00000449264 TARSL2A2RTX5 802 aaKnown RBP14.88□□□□□ -0.03
TNF-208ENST00000449264 K7ERQ8 282 aa14.88□□□□□ -0.03
TNF-208ENST00000449264 METTL18O95568 372 aa14.88□□□□□ -0.03
TNF-208ENST00000449264 CD160O95971 181 aa14.88□□□□□ -0.03
TNF-208ENST00000449264 CD68P34810 354 aaPredicted RBP14.88□□□□□ -0.03
TNF-208ENST00000449264 GEMIN4P57678 1058 aaKnown RBP14.88□□□□□ -0.03
TNF-208ENST00000449264 ECT2LQ008S8 904 aa14.88□□□□□ -0.03
TNF-208ENST00000449264 ZP2Q05996 745 aa14.88□□□□□ -0.03
TNF-208ENST00000449264 SULT2A1Q06520 285 aa14.88□□□□□ -0.03
TNF-208ENST00000449264 TDGQ13569 410 aa14.88□□□□□ -0.03
TNF-208ENST00000449264 RFTN1Q14699 578 aaPredicted RBP14.88□□□□□ -0.03
TNF-208ENST00000449264 IZUMO3Q5VZ72 239 aa14.88□□□□□ -0.03
TNF-208ENST00000449264 KIAA0907Q7Z7F0 614 aaPredicted RBP14.88□□□□□ -0.03
TNF-208ENST00000449264 SFTPA1Q8IWL2 248 aa14.88□□□□□ -0.03
TNF-208ENST00000449264 TEX26Q8N6G2 289 aa14.88□□□□□ -0.03
TNF-208ENST00000449264 TSEN2Q8NCE0 465 aaKnown RBP14.88□□□□□ -0.03
TNF-208ENST00000449264 CASKIN2Q8WXE0 1202 aa14.88□□□□□ -0.03
TNF-208ENST00000449264 IFT81Q8WYA0 676 aa14.88□□□□□ -0.03
TNF-208ENST00000449264 DNASE1L2Q92874 299 aa14.88□□□□□ -0.03
TNF-208ENST00000449264 LRRC45Q96CN5 670 aa14.88□□□□□ -0.03
TNF-208ENST00000449264 GBA3Q9H227 469 aa14.88□□□□□ -0.03
TNF-208ENST00000449264 PIAS3Q9Y6X2 628 aa14.88□□□□□ -0.03
TNF-208ENST00000449264 TBC1D3BA6NDS4 549 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 PRRT4C9JH25 899 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 SPECC1L-ADORA2AF8WAN1 911 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 MUSKO15146 869 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 SMAD6O43541 496 aaKnown RBP14.87□□□□□ -0.03
TNF-208ENST00000449264 KAT7O95251 611 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 CTHP32929 405 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 EIF2DP41214 584 aaKnown RBP14.87□□□□□ -0.03
TNF-208ENST00000449264 RHOAP61586 193 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 RNF135Q8IUD6 432 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 IFT20Q8IY31 132 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 PHTF2Q8N3S3 785 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 PGBD5Q8N414 524 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 POLR1EQ9GZS1 481 aaKnown RBP14.87□□□□□ -0.03
TNF-208ENST00000449264 ETNK1Q9HBU6 452 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 GLOD4Q9HC38 313 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 ATG2BQ96BY7 2078 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 ANKRD36A6QL64 1941 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 UQCRHLA0A096LP55 91 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 TTC24A2A3L6 582 aaPredicted RBP14.87□□□□□ -0.03
TNF-208ENST00000449264 E7EVH7 732 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 DNALI1O14645 258 aaPredicted RBP14.87□□□□□ -0.03
TNF-208ENST00000449264 CTIFO43310 598 aaKnown RBP14.87□□□□□ -0.03
TNF-208ENST00000449264 GJB3O75712 270 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 SEC31AO94979 1220 aaKnown RBP14.87□□□□□ -0.03
TNF-208ENST00000449264 APODP05090 189 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 UQCRHP07919 91 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 SRFP11831 508 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 SRCP12931 536 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 CALCOCO2Q13137 446 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 HLTFQ14527 1009 aaKnown RBP eCLIP14.87□□□□□ -0.03
TNF-208ENST00000449264 CYTH1Q15438 398 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 TXNDC11Q6PKC3 985 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 C4orf22Q6V702 233 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 GSPT2Q8IYD1 628 aaKnown RBP14.87□□□□□ -0.03
TNF-208ENST00000449264 GPR161Q8N6U8 529 aaKnown RBP14.87□□□□□ -0.03
TNF-208ENST00000449264 TTC17Q96AE7 1141 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 PSKH2Q96QS6 385 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 P2RY13Q9BPV8 354 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 TM6SF2Q9BZW4 377 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 TRPV5Q9NQA5 729 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 GDF3Q9NR23 364 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms