RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 CCL11P51671 97 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 CLCN5P51795 746 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 ASPHQ12797 758 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 SPDYE7PQ495Y7 208 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 DNAJC21Q5F1R6 531 aaKnown RBP5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 HFE2Q6ZVN8 426 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 PCGF5Q86SE9 256 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 TMEM200AQ86VY9 491 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 PNPLA1Q8N8W4 532 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 FEZF2Q8TBJ5 459 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 C5orf34Q96MH7 638 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 HEMGNQ9BXL5 484 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 FAM129AQ9BZQ8 928 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 FBRSQ9HAH7 460 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 YBX2Q9Y2T7 364 aaKnown RBP5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 A0A088AWK7 358 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 EDDM13A0A1B0GTR0 161 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 IRAK2O43187 625 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 ATP9BO43861 1147 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 UGT2B4P06133 528 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 TYRP14679 529 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 JUNDP17535 347 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 ZNF10P21506 573 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 RFC1P35251 1148 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 CLK2P49760 499 aaKnown RBP5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 AP2B1P63010 937 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 NFATC2Q13469 925 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 ZACNQ401N2 412 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 FASTKD1Q53R41 847 aaKnown RBP5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 CLLU1OSQ5K130 101 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 GPR153Q6NV75 609 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 C1orf127Q8N9H9 656 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 PCYT2Q99447 389 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 SMG9Q9H0W8 520 aaKnown RBP5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 CDH19Q9H159 772 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 PDE7BQ9NP56 450 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 BLOC1S4Q9NUP1 217 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 ABCB8Q9NUT2 735 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 KCNK4Q9NYG8 393 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 AIPL1Q9NZN9 384 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 CNTN3Q9P232 1028 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 HECAQ9UBI9 543 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 TRAF3IP3Q9Y228 551 aa5.73□□□□□ -1.49
CDC42BPA-209ENST00000448940 MYH1P12882 1939 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 TTC26A0AVF1 554 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 POLBP06746 335 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 GLI1P08151 1106 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 MLLT3P42568 568 aaPredicted RBP5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 GNPDA1P46926 289 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 FOXK1P85037 733 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 SH3PXD2AQ5TCZ1 1133 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 C8orf74Q6P047 294 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 VASH1Q7L8A9 365 aaPredicted RBP5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 CYB5D2Q8WUJ1 264 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 DNASE1L2Q92874 299 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 GTPBP3Q969Y2 492 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 C8orf48Q96LL4 319 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 TBCBQ99426 244 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 IMP3Q9NV31 184 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 LIMA1Q9UHB6 759 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 GPR34Q9UPC5 381 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 E5RJQ4 531 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 RRP9O43818 475 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 TRAPPC6AO75865 159 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 KIAA0754O94854 1291 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 SEMA4FO95754 770 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 GRK2P25098 689 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 TOB1P50616 345 aaPredicted RBP5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 FUT2Q10981 343 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 ABRQ12979 859 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 BBS9Q3SYG4 887 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 KLHL24Q6TFL4 600 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 GSPT2Q8IYD1 628 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 DEPDC4Q8N2C3 294 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 FAM160A2Q8N612 972 aaPredicted RBP5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 TMEM156Q8N614 296 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 C10orf53Q8N6V4 93 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 IRGQQ8WZA9 623 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 FAM126AQ9BYI3 521 aaPredicted RBP5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 BRD8Q9H0E9 1235 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 SERTAD3Q9UJW9 196 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 NOX1Q9Y5S8 564 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 MORC2Q9Y6X9 1032 aaPredicted RBP5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 A0A1B0GTW7 788 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 CHADO15335 359 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 MBTPS2O43462 519 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 STBD1O95210 358 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 TUBB4AP04350 444 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 FGFR3P22607 806 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 HNRNPH1P31943 449 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 CDR2Q01850 454 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 SNX1Q13596 522 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 MOGSQ13724 837 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 LEXMQ3ZCV2 418 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 TRIM65Q6PJ69 517 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 RNF19BQ6ZMZ0 732 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 CASD1Q96PB1 797 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 GSDMCQ9BYG8 508 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 IMPACTQ9P2X3 320 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms