RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 ATPAF2Q8N5M1 289 aa13.34□□□□□ -0.27
ERGIC3-209ENST00000447986 PCDH20Q8N6Y1 951 aaKnown RBP13.34□□□□□ -0.27
ERGIC3-209ENST00000447986 LRRC57Q8N9N7 239 aa13.34□□□□□ -0.27
ERGIC3-209ENST00000447986 EXD1Q8NHP7 514 aa13.34□□□□□ -0.27
ERGIC3-209ENST00000447986 NSMCE1Q8WV22 266 aa13.34□□□□□ -0.27
ERGIC3-209ENST00000447986 ISG20Q96AZ6 181 aaKnown RBP13.34□□□□□ -0.27
ERGIC3-209ENST00000447986 MKRN2Q9H000 416 aaKnown RBP13.34□□□□□ -0.27
ERGIC3-209ENST00000447986 KLC2Q9H0B6 622 aa13.34□□□□□ -0.27
ERGIC3-209ENST00000447986 UBA2Q9UBT2 640 aaPredicted RBP13.34□□□□□ -0.27
ERGIC3-209ENST00000447986 SCML1Q9UN30 329 aa13.34□□□□□ -0.27
ERGIC3-209ENST00000447986 PPP2R2CQ9Y2T4 447 aa13.34□□□□□ -0.27
ERGIC3-209ENST00000447986 MUC22E2RYF6 1773 aaPredicted RBP13.33□□□□□ -0.27
ERGIC3-209ENST00000447986 A0A0U1RQJ8 604 aa13.33□□□□□ -0.28
ERGIC3-209ENST00000447986 K7ERQ8 282 aa13.33□□□□□ -0.28
ERGIC3-209ENST00000447986 PRAMEF11O60813 436 aa13.33□□□□□ -0.28
ERGIC3-209ENST00000447986 RPP40O75818 363 aaKnown RBP13.33□□□□□ -0.28
ERGIC3-209ENST00000447986 MX2P20592 715 aa13.33□□□□□ -0.28
ERGIC3-209ENST00000447986 CTNNA2P26232 953 aa13.33□□□□□ -0.28
ERGIC3-209ENST00000447986 DNA2P51530 1060 aa13.33□□□□□ -0.28
ERGIC3-209ENST00000447986 IL10RBQ08334 325 aa13.33□□□□□ -0.28
ERGIC3-209ENST00000447986 TFDP2Q14188 446 aa13.33□□□□□ -0.28
ERGIC3-209ENST00000447986 RFTN1Q14699 578 aaPredicted RBP13.33□□□□□ -0.28
ERGIC3-209ENST00000447986 TFDP3Q5H9I0 405 aa13.33□□□□□ -0.28
ERGIC3-209ENST00000447986 NCBP2-AS2Q69YL0 99 aa13.33□□□□□ -0.28
ERGIC3-209ENST00000447986 CEP68Q76N32 757 aa13.33□□□□□ -0.28
ERGIC3-209ENST00000447986 NT5DC3Q86UY8 548 aa13.33□□□□□ -0.28
ERGIC3-209ENST00000447986 ARHGAP12Q8IWW6 846 aa13.33□□□□□ -0.28
ERGIC3-209ENST00000447986 GAB3Q8WWW8 586 aa13.33□□□□□ -0.28
ERGIC3-209ENST00000447986 RSPH9Q9H1X1 276 aaPredicted RBP13.33□□□□□ -0.28
ERGIC3-209ENST00000447986 SEMA4AQ9H3S1 761 aa13.33□□□□□ -0.28
ERGIC3-209ENST00000447986 MTG2Q9H4K7 406 aa13.33□□□□□ -0.28
ERGIC3-209ENST00000447986 ETNK2Q9NVF9 386 aa13.33□□□□□ -0.28
ERGIC3-209ENST00000447986 IPO11Q9UI26 975 aaKnown RBP13.33□□□□□ -0.28
ERGIC3-209ENST00000447986 CAPN6Q9Y6Q1 641 aa13.33□□□□□ -0.28
ERGIC3-209ENST00000447986 C3orf70A6NLC5 250 aaPredicted RBP13.32□□□□□ -0.28
ERGIC3-209ENST00000447986 C1QTNF3-AMACRE9PGA6 284 aa13.32□□□□□ -0.28
ERGIC3-209ENST00000447986 MCF2LO15068 1137 aa13.32□□□□□ -0.28
ERGIC3-209ENST00000447986 SMAD6O43541 496 aaKnown RBP13.32□□□□□ -0.28
ERGIC3-209ENST00000447986 LILRB5O75023 590 aa13.32□□□□□ -0.28
ERGIC3-209ENST00000447986 ADH1BP00325 375 aa13.32□□□□□ -0.28
ERGIC3-209ENST00000447986 COPS2P61201 443 aa13.32□□□□□ -0.28
ERGIC3-209ENST00000447986 SNRPD1P62314 119 aaKnown RBP13.32□□□□□ -0.28
ERGIC3-209ENST00000447986 FAM46CQ5VWP2 391 aa13.32□□□□□ -0.28
ERGIC3-209ENST00000447986 TIGD7Q6NT04 549 aaPredicted RBP13.32□□□□□ -0.28
ERGIC3-209ENST00000447986 MFSD7Q6UXD7 560 aa13.32□□□□□ -0.28
ERGIC3-209ENST00000447986 LEKR1Q6ZMV7 388 aa13.32□□□□□ -0.28
ERGIC3-209ENST00000447986 BZW1Q7L1Q6 419 aaKnown RBP13.32□□□□□ -0.28
ERGIC3-209ENST00000447986 STK40Q8N2I9 435 aa13.32□□□□□ -0.28
ERGIC3-209ENST00000447986 BBS5Q8N3I7 341 aa13.32□□□□□ -0.28
ERGIC3-209ENST00000447986 TRIM58Q8NG06 486 aa13.32□□□□□ -0.28
ERGIC3-209ENST00000447986 ZNF599Q96NL3 588 aa13.32□□□□□ -0.28
ERGIC3-209ENST00000447986 HAUS2Q9NVX0 235 aa13.32□□□□□ -0.28
ERGIC3-209ENST00000447986 RAB23Q9ULC3 237 aa13.32□□□□□ -0.28
ERGIC3-209ENST00000447986 NCKAP1Q9Y2A7 1128 aa13.32□□□□□ -0.28
ERGIC3-209ENST00000447986 FCF1Q9Y324 198 aaKnown RBP13.32□□□□□ -0.28
ERGIC3-209ENST00000447986 MFHAS1Q9Y4C4 1052 aa13.32□□□□□ -0.28
ERGIC3-209ENST00000447986 R4GN57 208 aa13.32□□□□□ -0.28
ERGIC3-209ENST00000447986 J3KR12 359 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 MFSD11O43934 449 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 TMCC1O94876 653 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 FTCDO95954 541 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 IL1BP01584 269 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 PRNPP04156 253 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 VAV1P15498 845 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 OXTRP30559 389 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 CDKN2BP42772 138 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 RHOAP61586 193 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 RPS14P62263 151 aaKnown RBP13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 RAD51Q06609 339 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 SIM2Q14190 667 aaPredicted RBP13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 CST6Q15828 149 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 CARD16Q5EG05 197 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 TMCO4Q5TGY1 634 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 SLC9A4Q6AI14 798 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 SPOCD1Q6ZMY3 1216 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 CACUL1Q86Y37 369 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 MMAAQ8IVH4 418 aaKnown RBP13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 RYBPQ8N488 228 aaPredicted RBP13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 PQLC3Q8N755 202 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 OR2AP1Q8NGE2 309 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 OR2A12Q8NGT7 310 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 KRT35Q92764 455 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 SLC6A17Q9H1V8 727 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 TNKS2Q9H2K2 1166 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 PDFQ9HBH1 243 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 ITM2CQ9NQX7 267 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 HEY1Q9Y5J3 304 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 CACNA1IQ9P0X4 2223 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 CD160O95971 181 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 IGSF6O95976 241 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 GSRP00390 522 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 C5AR1P21730 350 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 CHRNA3P32297 505 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 P2RY2P41231 377 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 GARSP41250 739 aaKnown RBP13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 NBL1P41271 181 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 MARCKSL1P49006 195 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 NR2C2P49116 596 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 RENBPP51606 427 aa13.31□□□□□ -0.28
ERGIC3-209ENST00000447986 DYNLT1P63172 113 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms