RNA–Protein interactions for RNA: ENST00000447696.5

MRPL28-205, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 3

Gene MRPL28, Length 722 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-205ENST00000447696 TMEM191CA6NGB0 347 aa24.5■■□□□ 1.51
MRPL28-205ENST00000447696 FAM47DPA6NHR8 397 aa24.5■■□□□ 1.51
MRPL28-205ENST00000447696 EIF3CLB5ME19 914 aaKnown RBP24.5■■□□□ 1.51
MRPL28-205ENST00000447696 ATMINO43313 823 aaPredicted RBP24.5■■□□□ 1.51
MRPL28-205ENST00000447696 RAMP2O60895 175 aa24.5■■□□□ 1.51
MRPL28-205ENST00000447696 PSMA2P25787 234 aa24.5■■□□□ 1.51
MRPL28-205ENST00000447696 CHRNA3P32297 505 aa24.5■■□□□ 1.51
MRPL28-205ENST00000447696 ARF5P84085 180 aa24.5■■□□□ 1.51
MRPL28-205ENST00000447696 TDRD12Q587J7 1177 aaKnown RBP24.5■■□□□ 1.51
MRPL28-205ENST00000447696 PIP4P1Q86T03 277 aa24.5■■□□□ 1.51
MRPL28-205ENST00000447696 VPS36Q86VN1 386 aa24.5■■□□□ 1.51
MRPL28-205ENST00000447696 PCDH20Q8N6Y1 951 aaKnown RBP24.5■■□□□ 1.51
MRPL28-205ENST00000447696 RTL3Q8N8U3 475 aaKnown RBP24.5■■□□□ 1.51
MRPL28-205ENST00000447696 TMIEQ8NEW7 156 aa24.5■■□□□ 1.51
MRPL28-205ENST00000447696 OR14C36Q8NHC7 312 aa24.5■■□□□ 1.51
MRPL28-205ENST00000447696 ARHGEF2Q92974 986 aaKnown RBP24.5■■□□□ 1.51
MRPL28-205ENST00000447696 EIF3CQ99613 913 aaKnown RBP24.5■■□□□ 1.51
MRPL28-205ENST00000447696 TMEM121BQ9BXQ6 578 aaPredicted RBP24.5■■□□□ 1.51
MRPL28-205ENST00000447696 NDFIP2Q9NV92 336 aa24.5■■□□□ 1.51
MRPL28-205ENST00000447696 CNOT8Q9UFF9 292 aaKnown RBP24.5■■□□□ 1.51
MRPL28-205ENST00000447696 DNAI1Q9UI46 699 aa24.5■■□□□ 1.51
MRPL28-205ENST00000447696 ASCC3Q8N3C0 2202 aaKnown RBP24.49■■□□□ 1.51
MRPL28-205ENST00000447696 PKD1L2Q7Z442 2459 aa24.49■■□□□ 1.51
MRPL28-205ENST00000447696 GIPC1O14908 333 aa24.49■■□□□ 1.51
MRPL28-205ENST00000447696 BNIP3LO60238 219 aa24.49■■□□□ 1.51
MRPL28-205ENST00000447696 CER1O95813 267 aa24.49■■□□□ 1.51
MRPL28-205ENST00000447696 PRNPP04156 253 aa24.49■■□□□ 1.51
MRPL28-205ENST00000447696 SERPING1P05155 500 aa24.49■■□□□ 1.51
MRPL28-205ENST00000447696 EPHB2P29323 1055 aa24.49■■□□□ 1.51
MRPL28-205ENST00000447696 ACVRL1P37023 503 aa24.49■■□□□ 1.51
MRPL28-205ENST00000447696 RECQLP46063 649 aaPredicted RBP24.49■■□□□ 1.51
MRPL28-205ENST00000447696 METAP1P53582 386 aa24.49■■□□□ 1.51
MRPL28-205ENST00000447696 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP24.49■■□□□ 1.51
MRPL28-205ENST00000447696 PYROXD2Q8N2H3 581 aa24.49■■□□□ 1.51
MRPL28-205ENST00000447696 OR2I1PQ8NGU4 316 aa24.49■■□□□ 1.51
MRPL28-205ENST00000447696 ZNF653Q96CK0 615 aa24.49■■□□□ 1.51
MRPL28-205ENST00000447696 SLC32A1Q9H598 525 aa24.49■■□□□ 1.51
MRPL28-205ENST00000447696 MRPL47Q9HD33 250 aaKnown RBP24.49■■□□□ 1.51
MRPL28-205ENST00000447696 LUC7L2Q9Y383 392 aaKnown RBP24.49■■□□□ 1.51
MRPL28-205ENST00000447696 SLCO1B1Q9Y6L6 691 aa24.49■■□□□ 1.51
MRPL28-205ENST00000447696 ADAMTS9Q9P2N4 1935 aa24.49■■□□□ 1.51
MRPL28-205ENST00000447696 WASH4PA8MWX3 477 aa24.48■■□□□ 1.51
MRPL28-205ENST00000447696 FGF10O15520 208 aaPredicted RBP24.48■■□□□ 1.51
MRPL28-205ENST00000447696 PLRG1O43660 514 aaKnown RBP24.48■■□□□ 1.51
MRPL28-205ENST00000447696 ZNF821O75541 412 aaPredicted RBP24.48■■□□□ 1.51
MRPL28-205ENST00000447696 CTSLP07711 333 aa24.48■■□□□ 1.51
MRPL28-205ENST00000447696 ZNF883P0CG24 379 aa24.48■■□□□ 1.51
MRPL28-205ENST00000447696 RACK1P63244 317 aaKnown RBP24.48■■□□□ 1.51
MRPL28-205ENST00000447696 BNC1Q01954 994 aa24.48■■□□□ 1.51
MRPL28-205ENST00000447696 CCDC15Q0P6D6 951 aa24.48■■□□□ 1.51
MRPL28-205ENST00000447696 CNTN1Q12860 1018 aa24.48■■□□□ 1.51
MRPL28-205ENST00000447696 AGBL4Q5VU57 503 aa24.48■■□□□ 1.51
MRPL28-205ENST00000447696 ISG20Q96AZ6 181 aaKnown RBP24.48■■□□□ 1.51
MRPL28-205ENST00000447696 NCAPGQ9BPX3 1015 aa24.48■■□□□ 1.51
MRPL28-205ENST00000447696 CATSPERBQ9H7T0 1116 aa24.48■■□□□ 1.51
MRPL28-205ENST00000447696 HPCAL4Q9UM19 191 aa24.48■■□□□ 1.51
MRPL28-205ENST00000447696 CHD5Q8TDI0 1954 aa24.47■■□□□ 1.51
MRPL28-205ENST00000447696 A0A1B0GVT2 93 aa24.47■■□□□ 1.51
MRPL28-205ENST00000447696 ZSCAN5CA6NGD5 496 aaPredicted RBP24.47■■□□□ 1.51
MRPL28-205ENST00000447696 LATO43561 262 aa24.47■■□□□ 1.51
MRPL28-205ENST00000447696 GYPCP04921 128 aa24.47■■□□□ 1.51
MRPL28-205ENST00000447696 NUDT1P36639 197 aa24.47■■□□□ 1.51
MRPL28-205ENST00000447696 CSNK1EP49674 416 aaKnown RBP24.47■■□□□ 1.51
MRPL28-205ENST00000447696 POLD3Q15054 466 aaPredicted RBP24.47■■□□□ 1.51
MRPL28-205ENST00000447696 DNAAF5Q86Y56 855 aa24.47■■□□□ 1.51
MRPL28-205ENST00000447696 PLPP6Q8IY26 295 aa24.47■■□□□ 1.51
MRPL28-205ENST00000447696 GATA6Q92908 595 aa24.47■■□□□ 1.51
MRPL28-205ENST00000447696 XPO4Q9C0E2 1151 aaKnown RBP24.47■■□□□ 1.51
MRPL28-205ENST00000447696 TNKS2Q9H2K2 1166 aa24.47■■□□□ 1.51
MRPL28-205ENST00000447696 DONSONQ9NYP3 566 aa24.47■■□□□ 1.51
MRPL28-205ENST00000447696 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.47■■□□□ 1.511e-7■□□□□ 8.2
MRPL28-205ENST00000447696 ASPMQ8IZT6 3477 aa24.46■■□□□ 1.51
MRPL28-205ENST00000447696 CREB3O43889 395 aa24.46■■□□□ 1.51
MRPL28-205ENST00000447696 RNF8O76064 485 aa24.46■■□□□ 1.51
MRPL28-205ENST00000447696 CD160O95971 181 aa24.46■■□□□ 1.51
MRPL28-205ENST00000447696 CD59P13987 128 aa24.46■■□□□ 1.51
MRPL28-205ENST00000447696 YBEYP58557 167 aaPredicted RBP24.46■■□□□ 1.51
MRPL28-205ENST00000447696 DPY19L3Q6ZPD9 716 aa24.46■■□□□ 1.51
MRPL28-205ENST00000447696 PSTKQ8IV42 348 aaKnown RBP24.46■■□□□ 1.51
MRPL28-205ENST00000447696 CHST14Q8NCH0 376 aa24.46■■□□□ 1.51
MRPL28-205ENST00000447696 DEFB124Q8NES8 71 aa24.46■■□□□ 1.51
MRPL28-205ENST00000447696 CPLX3Q8WVH0 158 aa24.46■■□□□ 1.51
MRPL28-205ENST00000447696 PPP1R16AQ96I34 528 aa24.46■■□□□ 1.51
MRPL28-205ENST00000447696 SCNM1Q9BWG6 230 aa24.46■■□□□ 1.51
MRPL28-205ENST00000447696 TSPY26PQ9H489 355 aa24.46■■□□□ 1.51
MRPL28-205ENST00000447696 PREBQ9HCU5 417 aa24.46■■□□□ 1.51
MRPL28-205ENST00000447696 IL36AQ9UHA7 158 aa24.46■■□□□ 1.51
MRPL28-205ENST00000447696 AP4E1Q9UPM8 1137 aa24.46■■□□□ 1.51
MRPL28-205ENST00000447696 ANKRD6Q9Y2G4 727 aa24.46■■□□□ 1.51
MRPL28-205ENST00000447696 TBC1D3DA0A087WVF3 549 aa24.45■■□□□ 1.5
MRPL28-205ENST00000447696 TBC1D3IA0A087WXS9 549 aa24.45■■□□□ 1.5
MRPL28-205ENST00000447696 TBC1D3EA0A087X179 549 aa24.45■■□□□ 1.5
MRPL28-205ENST00000447696 TBC1D3KA0A087X1G2 549 aa24.45■■□□□ 1.5
MRPL28-205ENST00000447696 TBC1D3FA6NER0 549 aaPredicted RBP24.45■■□□□ 1.5
MRPL28-205ENST00000447696 SRRM3A6NNA2 597 aaPredicted RBP24.45■■□□□ 1.5
MRPL28-205ENST00000447696 TBC1D3LB9A6J9 549 aa24.45■■□□□ 1.5
MRPL28-205ENST00000447696 PLK4O00444 970 aa24.45■■□□□ 1.5
MRPL28-205ENST00000447696 KPNA3O00505 521 aaPredicted RBP24.45■■□□□ 1.5
MRPL28-205ENST00000447696 CBFA2T2O43439 604 aa24.45■■□□□ 1.5
MRPL28-205ENST00000447696 KDELR3O43731 214 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms