RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 POPDC2Q9HBU9 364 aa19.48■□□□□ 0.71
HMGA1-205ENST00000447654 SCUBE2Q9NQ36 999 aa19.48■□□□□ 0.71
HMGA1-205ENST00000447654 PACSIN3Q9UKS6 424 aa19.48■□□□□ 0.71
HMGA1-205ENST00000447654 MYH9P35579 1960 aaKnown RBP19.48■□□□□ 0.71
HMGA1-205ENST00000447654 SYCE1LA8MT33 242 aa19.47■□□□□ 0.71
HMGA1-205ENST00000447654 TEX28O15482 410 aa19.47■□□□□ 0.71
HMGA1-205ENST00000447654 H2AFYO75367 372 aaKnown RBP19.47■□□□□ 0.71
HMGA1-205ENST00000447654 CXCR2P25025 360 aa19.47■□□□□ 0.71
HMGA1-205ENST00000447654 SERPINB1P30740 379 aa19.47■□□□□ 0.71
HMGA1-205ENST00000447654 FSTL1Q12841 308 aa19.47■□□□□ 0.71
HMGA1-205ENST00000447654 BMPR2Q13873 1038 aa19.47■□□□□ 0.71
HMGA1-205ENST00000447654 N4BP2L1Q5TBK1 243 aaPredicted RBP19.47■□□□□ 0.71
HMGA1-205ENST00000447654 VWA5B1Q5TIE3 1220 aa19.47■□□□□ 0.71
HMGA1-205ENST00000447654 CHSY3Q70JA7 882 aa19.47■□□□□ 0.71
HMGA1-205ENST00000447654 HERC6Q8IVU3 1022 aa19.47■□□□□ 0.71
HMGA1-205ENST00000447654 KIAA2013Q8IYS2 634 aa19.47■□□□□ 0.71
HMGA1-205ENST00000447654 HCAR2Q8TDS4 363 aa19.47■□□□□ 0.71
HMGA1-205ENST00000447654 SEPT8Q92599 483 aa19.47■□□□□ 0.71
HMGA1-205ENST00000447654 RCN3Q96D15 328 aa19.47■□□□□ 0.71
HMGA1-205ENST00000447654 EGLN2Q96KS0 407 aa19.47■□□□□ 0.71
HMGA1-205ENST00000447654 C12orf42Q96LP6 360 aa19.47■□□□□ 0.71
HMGA1-205ENST00000447654 CIB1Q99828 191 aa19.47■□□□□ 0.71
HMGA1-205ENST00000447654 RETREG1Q9H6L5 497 aa19.47■□□□□ 0.71
HMGA1-205ENST00000447654 MRGBPQ9NV56 204 aa19.47■□□□□ 0.71
HMGA1-205ENST00000447654 SMOXQ9NWM0 555 aa19.47■□□□□ 0.71
HMGA1-205ENST00000447654 SNX13Q9Y5W8 968 aa19.47■□□□□ 0.71
HMGA1-205ENST00000447654 HMX2A2RU54 273 aa19.47■□□□□ 0.71
HMGA1-205ENST00000447654 WDR64B1ANS9 1081 aa19.47■□□□□ 0.71
HMGA1-205ENST00000447654 AVILO75366 819 aa19.47■□□□□ 0.71
HMGA1-205ENST00000447654 YWHAZP63104 245 aaKnown RBP19.47■□□□□ 0.71
HMGA1-205ENST00000447654 INAVAQ3KP66 663 aa19.47■□□□□ 0.71
HMGA1-205ENST00000447654 CATSPERGQ6ZRH7 1159 aa19.47■□□□□ 0.71
HMGA1-205ENST00000447654 RFPL4BQ6ZWI9 263 aa19.47■□□□□ 0.71
HMGA1-205ENST00000447654 TFAP2DQ7Z6R9 452 aa19.47■□□□□ 0.71
HMGA1-205ENST00000447654 BSNDQ8WZ55 320 aa19.47■□□□□ 0.71
HMGA1-205ENST00000447654 RNF38Q9H0F5 515 aa19.47■□□□□ 0.71
HMGA1-205ENST00000447654 ZNF385DQ9H6B1 395 aa19.47■□□□□ 0.71
HMGA1-205ENST00000447654 STBD1O95210 358 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 VAPBO95292 243 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 BMPR1AP36894 532 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 SERPINB5P36952 375 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 GNG2P59768 71 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 MPP1Q00013 466 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 GTF2BQ00403 316 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 SP4Q02446 784 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 SELPLGQ14242 412 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 XKR9Q5GH70 373 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 PPP6R3Q5H9R7 873 aaPredicted RBP19.46■□□□□ 0.71
HMGA1-205ENST00000447654 FAM102BQ5T8I3 360 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 UGT3A1Q6NUS8 523 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 TAS2R42Q7RTR8 314 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 C14orf80Q86SX3 495 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 GRAMD2AQ8IUY3 354 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 FAM20CQ8IXL6 584 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 BCL7BQ9BQE9 202 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 ST6GALNAC4Q9H4F1 302 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 AS3MTQ9HBK9 375 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 TBC1D14Q9P2M4 693 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 C3orf70A6NLC5 250 aaPredicted RBP19.46■□□□□ 0.71
HMGA1-205ENST00000447654 CFLARO15519 480 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 ASNA1O43681 348 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 MTRF1O75570 445 aaKnown RBP19.46■□□□□ 0.71
HMGA1-205ENST00000447654 STAM2O75886 525 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 MBL2P11226 248 aaPredicted RBP19.46■□□□□ 0.71
HMGA1-205ENST00000447654 MYCLP1P12525 358 aaPredicted RBP19.46■□□□□ 0.71
HMGA1-205ENST00000447654 ENO3P13929 434 aaPredicted RBP19.46■□□□□ 0.71
HMGA1-205ENST00000447654 MX2P20592 715 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 PRKCQQ04759 706 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 LRP8Q14114 963 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 AASDHQ4L235 1098 aaPredicted RBP19.46■□□□□ 0.71
HMGA1-205ENST00000447654 IQSEC1Q6DN90 963 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 LLGL2Q6P1M3 1020 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 ZNF773Q6PK81 442 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 KIAA0408Q6ZU52 694 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 APOBEC3FQ8IUX4 373 aaKnown RBP19.46■□□□□ 0.71
HMGA1-205ENST00000447654 ABRAQ8N0Z2 381 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 ESX1Q8N693 406 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 PKD2L2Q9NZM6 624 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 TESMINQ9Y4I5 508 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 AFG3L2Q9Y4W6 797 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 LCTP09848 1927 aa19.46■□□□□ 0.71
HMGA1-205ENST00000447654 ISPDA4D126 451 aa19.45■□□□□ 0.7
HMGA1-205ENST00000447654 DYRK3O43781 588 aa19.45■□□□□ 0.7
HMGA1-205ENST00000447654 CSH1P0DML2 217 aa19.45■□□□□ 0.7
HMGA1-205ENST00000447654 CSH2P0DML3 217 aa19.45■□□□□ 0.7
HMGA1-205ENST00000447654 OSBPP22059 807 aa19.45■□□□□ 0.7
HMGA1-205ENST00000447654 KCNA4P22459 653 aa19.45■□□□□ 0.7
HMGA1-205ENST00000447654 RFC1P35251 1148 aaPredicted RBP19.45■□□□□ 0.7
HMGA1-205ENST00000447654 AP3M2P53677 418 aa19.45■□□□□ 0.7
HMGA1-205ENST00000447654 C19orf57Q0VDD7 668 aa19.45■□□□□ 0.7
HMGA1-205ENST00000447654 PERM1Q5SV97 790 aa19.45■□□□□ 0.7
HMGA1-205ENST00000447654 CCDC81Q6ZN84 652 aa19.45■□□□□ 0.7
HMGA1-205ENST00000447654 ARMC8Q8IUR7 673 aa19.45■□□□□ 0.7
HMGA1-205ENST00000447654 AGTPBP1Q9UPW5 1226 aa19.45■□□□□ 0.7
HMGA1-205ENST00000447654 GOLGA8IPA6NC78 632 aa19.44■□□□□ 0.7
HMGA1-205ENST00000447654 GOLGA8JA6NMD2 632 aa19.44■□□□□ 0.7
HMGA1-205ENST00000447654 DNAJB5O75953 348 aa19.44■□□□□ 0.7
HMGA1-205ENST00000447654 MATN1P21941 496 aa19.44■□□□□ 0.7
HMGA1-205ENST00000447654 CCND2P30279 289 aa19.44■□□□□ 0.7
HMGA1-205ENST00000447654 DPP6P42658 865 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms