RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 FOXJ1Q92949 421 aa15.13■□□□□ 0.01
HDAC4-204ENST00000446876 NCAPGQ9BPX3 1015 aa15.13■□□□□ 0.01
HDAC4-204ENST00000446876 KLHL11Q9NVR0 708 aa15.13■□□□□ 0.01
HDAC4-204ENST00000446876 UVRAGQ9P2Y5 699 aa15.13■□□□□ 0.01
HDAC4-204ENST00000446876 PPM1HQ9ULR3 514 aa15.13■□□□□ 0.01
HDAC4-204ENST00000446876 SCML1Q9UN30 329 aa15.13■□□□□ 0.01
HDAC4-204ENST00000446876 NCKAP1Q9Y2A7 1128 aa15.13■□□□□ 0.01
HDAC4-204ENST00000446876 SLCO1B1Q9Y6L6 691 aa15.13■□□□□ 0.01
HDAC4-204ENST00000446876 DOCK9Q9BZ29 2069 aa15.12■□□□□ 0.01
HDAC4-204ENST00000446876 LNP1A1A4G5 178 aa15.12■□□□□ 0.01
HDAC4-204ENST00000446876 METTL12A8MUP2 240 aa15.12■□□□□ 0.01
HDAC4-204ENST00000446876 EIF3CLB5ME19 914 aaKnown RBP15.12■□□□□ 0.01
HDAC4-204ENST00000446876 KHNYNO15037 678 aaKnown RBP15.12■□□□□ 0.01
HDAC4-204ENST00000446876 ALOX15BO15296 676 aa15.12■□□□□ 0.01
HDAC4-204ENST00000446876 BUB1O43683 1085 aa15.12■□□□□ 0.01
HDAC4-204ENST00000446876 PROSCO94903 275 aa15.12■□□□□ 0.01
HDAC4-204ENST00000446876 CFIP05156 583 aa15.12■□□□□ 0.01
HDAC4-204ENST00000446876 GKP32189 559 aa15.12■□□□□ 0.01
HDAC4-204ENST00000446876 CHRNA3P32297 505 aa15.12■□□□□ 0.01
HDAC4-204ENST00000446876 TAS2R40P59535 323 aa15.12■□□□□ 0.01
HDAC4-204ENST00000446876 IRX4P78413 519 aa15.12■□□□□ 0.01
HDAC4-204ENST00000446876 SERINC3Q13530 473 aa15.12■□□□□ 0.01
HDAC4-204ENST00000446876 ATP13A4Q4VNC1 1196 aa15.12■□□□□ 0.01
HDAC4-204ENST00000446876 BOLA3Q53S33 107 aa15.12■□□□□ 0.01
HDAC4-204ENST00000446876 NCEH1Q6PIU2 408 aa15.12■□□□□ 0.01
HDAC4-204ENST00000446876 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.12■□□□□ 0.01
HDAC4-204ENST00000446876 DSG4Q86SJ6 1040 aa15.12■□□□□ 0.01
HDAC4-204ENST00000446876 TP53INP2Q8IXH6 220 aa15.12■□□□□ 0.01
HDAC4-204ENST00000446876 ZCCHC9Q8N567 271 aaKnown RBP15.12■□□□□ 0.01
HDAC4-204ENST00000446876 CADM4Q8NFZ8 388 aa15.12■□□□□ 0.01
HDAC4-204ENST00000446876 OR6K2Q8NGY2 324 aa15.12■□□□□ 0.01
HDAC4-204ENST00000446876 SLC35G2Q8TBE7 412 aa15.12■□□□□ 0.01
HDAC4-204ENST00000446876 ARRDC3Q96B67 414 aa15.12■□□□□ 0.01
HDAC4-204ENST00000446876 EIF3CQ99613 913 aaKnown RBP15.12■□□□□ 0.01
HDAC4-204ENST00000446876 EDEM2Q9BV94 578 aa15.12■□□□□ 0.01
HDAC4-204ENST00000446876 CEP44Q9C0F1 390 aa15.12■□□□□ 0.01
HDAC4-204ENST00000446876 SLC39A8Q9C0K1 460 aa15.12■□□□□ 0.01
HDAC4-204ENST00000446876 MIR1-1HGQ9H1L0 117 aa15.12■□□□□ 0.01
HDAC4-204ENST00000446876 LRRC19Q9H756 370 aa15.12■□□□□ 0.01
HDAC4-204ENST00000446876 SGK2Q9HBY8 427 aa15.12■□□□□ 0.01
HDAC4-204ENST00000446876 PCDH18Q9HCL0 1135 aa15.12■□□□□ 0.01
HDAC4-204ENST00000446876 ETNK2Q9NVF9 386 aa15.12■□□□□ 0.01
HDAC4-204ENST00000446876 EIF2B4Q9UI10 523 aaKnown RBP15.12■□□□□ 0.01
HDAC4-204ENST00000446876 HPCAL4Q9UM19 191 aa15.12■□□□□ 0.01
HDAC4-204ENST00000446876 TFR2Q9UP52 801 aa15.12■□□□□ 0.01
HDAC4-204ENST00000446876 TP53BP1Q12888 1972 aaPredicted RBP15.11■□□□□ 0.01
HDAC4-204ENST00000446876 SHROOM3Q8TF72 1996 aa15.11■□□□□ 0.01
HDAC4-204ENST00000446876 C1QTNF3-AMACRE9PGA6 284 aa15.11■□□□□ 0.01
HDAC4-204ENST00000446876 H3BRJ5 948 aa15.11■□□□□ 0.01
HDAC4-204ENST00000446876 KPNA3O00505 521 aaPredicted RBP15.11■□□□□ 0.01
HDAC4-204ENST00000446876 TMCC1O94876 653 aa15.11■□□□□ 0.01
HDAC4-204ENST00000446876 FSBPO95073 299 aa15.11■□□□□ 0.01
HDAC4-204ENST00000446876 CD48P09326 243 aa15.11■□□□□ 0.01
HDAC4-204ENST00000446876 AMPD1P23109 780 aa15.11■□□□□ 0.01
HDAC4-204ENST00000446876 RECQLP46063 649 aaPredicted RBP15.11■□□□□ 0.01
HDAC4-204ENST00000446876 CCNHP51946 323 aaPredicted RBP15.11■□□□□ 0.01
HDAC4-204ENST00000446876 ADPRHP54922 357 aa15.11■□□□□ 0.01
HDAC4-204ENST00000446876 YBEYP58557 167 aaPredicted RBP15.11■□□□□ 0.01
HDAC4-204ENST00000446876 SLC20A2Q08357 652 aa15.11■□□□□ 0.01
HDAC4-204ENST00000446876 CNTN1Q12860 1018 aa15.11■□□□□ 0.01
HDAC4-204ENST00000446876 MMRN1Q13201 1228 aa15.11■□□□□ 0.01
HDAC4-204ENST00000446876 MESDQ14696 234 aa15.11■□□□□ 0.01
HDAC4-204ENST00000446876 PARP15Q460N3 678 aa15.11■□□□□ 0.01
HDAC4-204ENST00000446876 CARD16Q5EG05 197 aa15.11■□□□□ 0.01
HDAC4-204ENST00000446876 ARSIQ5FYB1 569 aa15.11■□□□□ 0.01
HDAC4-204ENST00000446876 WDR45BQ5MNZ6 344 aa15.11■□□□□ 0.01
HDAC4-204ENST00000446876 SYCP2LQ5T4T6 812 aa15.11■□□□□ 0.01
HDAC4-204ENST00000446876 ATXN7L2Q5T6C5 722 aaPredicted RBP15.11■□□□□ 0.01
HDAC4-204ENST00000446876 ARHGAP36Q6ZRI8 547 aa15.11■□□□□ 0.01
HDAC4-204ENST00000446876 POLNQ7Z5Q5 900 aa15.11■□□□□ 0.01
HDAC4-204ENST00000446876 ARHGAP12Q8IWW6 846 aa15.11■□□□□ 0.01
HDAC4-204ENST00000446876 PCDH20Q8N6Y1 951 aaKnown RBP15.11■□□□□ 0.01
HDAC4-204ENST00000446876 OR14C36Q8NHC7 312 aa15.11■□□□□ 0.01
HDAC4-204ENST00000446876 TEKT4Q8WW24 435 aa15.11■□□□□ 0.01
HDAC4-204ENST00000446876 CCDC114Q96M63 670 aa15.11■□□□□ 0.01
HDAC4-204ENST00000446876 CSPG4P5Q96PW8 444 aa15.11■□□□□ 0.01
HDAC4-204ENST00000446876 ZDHHC6Q9H6R6 413 aa15.11■□□□□ 0.01
HDAC4-204ENST00000446876 IL36AQ9UHA7 158 aa15.11■□□□□ 0.01
HDAC4-204ENST00000446876 FZD4Q9ULV1 537 aa15.11■□□□□ 0.01
HDAC4-204ENST00000446876 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.11■□□□□ 0.01
HDAC4-204ENST00000446876 FARP1Q9Y4F1 1045 aaPredicted RBP15.11■□□□□ 0.01
HDAC4-204ENST00000446876 WASF2Q9Y6W5 498 aa15.11■□□□□ 0.01
HDAC4-204ENST00000446876 SOWAHDA6NJG2 315 aa15.1■□□□□ 0.01
HDAC4-204ENST00000446876 PRR5-ARHGAP8B1AHC4 643 aa15.1■□□□□ 0.01
HDAC4-204ENST00000446876 J3KR12 359 aa15.1■□□□□ 0.01
HDAC4-204ENST00000446876 DFFAO00273 331 aa15.1■□□□□ 0.01
HDAC4-204ENST00000446876 LEFTY1O75610 366 aa15.1■□□□□ 0.01
HDAC4-204ENST00000446876 IGHV4-34P06331 123 aa15.1■□□□□ 0.01
HDAC4-204ENST00000446876 ARL4AP40617 200 aa15.1■□□□□ 0.01
HDAC4-204ENST00000446876 HCAR3P49019 387 aa15.1■□□□□ 0.01
HDAC4-204ENST00000446876 PAPOLAP51003 745 aaKnown RBP15.1■□□□□ 0.01
HDAC4-204ENST00000446876 NDST2P52849 883 aa15.1■□□□□ 0.01
HDAC4-204ENST00000446876 CDH6P55285 790 aa15.1■□□□□ 0.01
HDAC4-204ENST00000446876 GEMIN4P57678 1058 aaKnown RBP15.1■□□□□ 0.01
HDAC4-204ENST00000446876 PPP2CBP62714 309 aa15.1■□□□□ 0.01
HDAC4-204ENST00000446876 PPP2CAP67775 309 aa15.1■□□□□ 0.01
HDAC4-204ENST00000446876 ARHGAP8P85298 464 aa15.1■□□□□ 0.01
HDAC4-204ENST00000446876 KRT81Q14533 505 aa15.1■□□□□ 0.01
HDAC4-204ENST00000446876 AGBL4Q5VU57 503 aa15.1■□□□□ 0.01
HDAC4-204ENST00000446876 FAM46CQ5VWP2 391 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms