RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 DCDC2Q9UHG0 476 aa15.94■□□□□ 0.14
SNX13-204ENST00000444712 PLXNA4Q9HCM2 1894 aa15.94■□□□□ 0.14
SNX13-204ENST00000444712 HMX2A2RU54 273 aa15.94■□□□□ 0.14
SNX13-204ENST00000444712 TIMM44O43615 452 aa15.94■□□□□ 0.14
SNX13-204ENST00000444712 MT-CYBP00156 380 aaPredicted RBP15.94■□□□□ 0.14
SNX13-204ENST00000444712 IL1BP01584 269 aa15.94■□□□□ 0.14
SNX13-204ENST00000444712 GSTA1P08263 222 aa15.94■□□□□ 0.14
SNX13-204ENST00000444712 TROVE2P10155 538 aaKnown RBP eCLIP15.94■□□□□ 0.14
SNX13-204ENST00000444712 ERVK-10P10266 1014 aa15.94■□□□□ 0.14
SNX13-204ENST00000444712 HMGA1P17096 107 aaKnown RBP15.94■□□□□ 0.14
SNX13-204ENST00000444712 PAMP19021 973 aa15.94■□□□□ 0.14
SNX13-204ENST00000444712 ADRA1AP35348 466 aa15.94■□□□□ 0.14
SNX13-204ENST00000444712 SERPINB4P48594 390 aa15.94■□□□□ 0.14
SNX13-204ENST00000444712 WDR5P61964 334 aaKnown RBP15.94■□□□□ 0.14
SNX13-204ENST00000444712 INSCQ1MX18 579 aa15.94■□□□□ 0.14
SNX13-204ENST00000444712 PKN3Q6P5Z2 889 aa15.94■□□□□ 0.14
SNX13-204ENST00000444712 UNC5BQ8IZJ1 945 aa15.94■□□□□ 0.14
SNX13-204ENST00000444712 GABPB2Q8TAK5 448 aaPredicted RBP15.94■□□□□ 0.14
SNX13-204ENST00000444712 ZNF398Q8TD17 642 aa15.94■□□□□ 0.14
SNX13-204ENST00000444712 ZNF599Q96NL3 588 aa15.94■□□□□ 0.14
SNX13-204ENST00000444712 APOL2Q9BQE5 337 aa15.94■□□□□ 0.14
SNX13-204ENST00000444712 SSX2IPQ9Y2D8 614 aa15.94■□□□□ 0.14
SNX13-204ENST00000444712 MYLKQ15746 1914 aa15.93■□□□□ 0.14
SNX13-204ENST00000444712 KIAA0355O15063 1070 aa15.93■□□□□ 0.14
SNX13-204ENST00000444712 BIRC5O15392 142 aa15.93■□□□□ 0.14
SNX13-204ENST00000444712 SEC24AO95486 1093 aa15.93■□□□□ 0.14
SNX13-204ENST00000444712 PEX11BO96011 259 aa15.93■□□□□ 0.14
SNX13-204ENST00000444712 MAGEA9P43362 315 aa15.93■□□□□ 0.14
SNX13-204ENST00000444712 PLD1Q13393 1074 aa15.93■□□□□ 0.14
SNX13-204ENST00000444712 SERINC3Q13530 473 aa15.93■□□□□ 0.14
SNX13-204ENST00000444712 NADSYN1Q6IA69 706 aa15.93■□□□□ 0.14
SNX13-204ENST00000444712 LGI2Q8N0V4 545 aa15.93■□□□□ 0.14
SNX13-204ENST00000444712 BBS5Q8N3I7 341 aa15.93■□□□□ 0.14
SNX13-204ENST00000444712 ISL2Q96A47 359 aa15.93■□□□□ 0.14
SNX13-204ENST00000444712 IMP4Q96G21 291 aaKnown RBP15.93■□□□□ 0.14
SNX13-204ENST00000444712 MAGEH1Q9H213 219 aa15.93■□□□□ 0.14
SNX13-204ENST00000444712 ARNT2Q9HBZ2 717 aa15.93■□□□□ 0.14
SNX13-204ENST00000444712 C20orf96Q9NUD7 363 aaPredicted RBP15.93■□□□□ 0.14
SNX13-204ENST00000444712 FSBPO95073 299 aa15.92■□□□□ 0.14
SNX13-204ENST00000444712 RAG1P15918 1043 aa15.92■□□□□ 0.14
SNX13-204ENST00000444712 ALDH3A1P30838 453 aa15.92■□□□□ 0.14
SNX13-204ENST00000444712 SERPINB8P50452 374 aa15.92■□□□□ 0.14
SNX13-204ENST00000444712 LIMK2P53671 638 aa15.92■□□□□ 0.14
SNX13-204ENST00000444712 CDH4P55283 916 aa15.92■□□□□ 0.14
SNX13-204ENST00000444712 UGP2Q16851 508 aa15.92■□□□□ 0.14
SNX13-204ENST00000444712 TEDDM1Q5T9Z0 273 aa15.92■□□□□ 0.14
SNX13-204ENST00000444712 TMCO4Q5TGY1 634 aa15.92■□□□□ 0.14
SNX13-204ENST00000444712 ATG16L1Q676U5 607 aa15.92■□□□□ 0.14
SNX13-204ENST00000444712 CGB2Q6NT52 195 aa15.92■□□□□ 0.14
SNX13-204ENST00000444712 CES3Q6UWW8 571 aa15.92■□□□□ 0.14
SNX13-204ENST00000444712 CCDC63Q8NA47 563 aa15.92■□□□□ 0.14
SNX13-204ENST00000444712 PPM1EQ8WY54 764 aa15.92■□□□□ 0.14
SNX13-204ENST00000444712 PABPC5Q96DU9 382 aaKnown RBP15.92■□□□□ 0.14
SNX13-204ENST00000444712 MFSD3Q96ES6 412 aa15.92■□□□□ 0.14
SNX13-204ENST00000444712 SLC13A1Q9BZW2 595 aa15.92■□□□□ 0.14
SNX13-204ENST00000444712 NT5MQ9NPB1 228 aa15.92■□□□□ 0.14
SNX13-204ENST00000444712 CHRAC1Q9NRG0 131 aa15.92■□□□□ 0.14
SNX13-204ENST00000444712 MRPL17Q9NRX2 175 aaKnown RBP15.92■□□□□ 0.14
SNX13-204ENST00000444712 MRPL42Q9Y6G3 142 aaKnown RBP15.92■□□□□ 0.14
SNX13-204ENST00000444712 USH1CQ9Y6N9 552 aa15.92■□□□□ 0.14
SNX13-204ENST00000444712 PRRG1O14668 218 aa15.92■□□□□ 0.14
SNX13-204ENST00000444712 COCHO43405 550 aa15.92■□□□□ 0.14
SNX13-204ENST00000444712 KCNQ1P51787 676 aa15.92■□□□□ 0.14
SNX13-204ENST00000444712 EPHB3P54753 998 aa15.92■□□□□ 0.14
SNX13-204ENST00000444712 DEFB103AP81534 67 aa15.92■□□□□ 0.14
SNX13-204ENST00000444712 CCDC15Q0P6D6 951 aa15.92■□□□□ 0.14
SNX13-204ENST00000444712 LRRC26Q2I0M4 334 aa15.92■□□□□ 0.14
SNX13-204ENST00000444712 RANBP10Q6VN20 620 aa15.92■□□□□ 0.14
SNX13-204ENST00000444712 STRA8Q7Z7C7 330 aa15.92■□□□□ 0.14
SNX13-204ENST00000444712 ITIH5Q86UX2 942 aa15.92■□□□□ 0.14
SNX13-204ENST00000444712 TCEAL8Q8IYN2 117 aa15.92■□□□□ 0.14
SNX13-204ENST00000444712 PSMG2Q969U7 264 aa15.92■□□□□ 0.14
SNX13-204ENST00000444712 ZNF419Q96HQ0 510 aaPredicted RBP15.92■□□□□ 0.14
SNX13-204ENST00000444712 MRGPRX2Q96LB1 330 aa15.92■□□□□ 0.14
SNX13-204ENST00000444712 TSSK1BQ9BXA7 367 aa15.92■□□□□ 0.14
SNX13-204ENST00000444712 TCAF1Q9Y4C2 921 aa15.92■□□□□ 0.14
SNX13-204ENST00000444712 OBSL1O75147 1896 aa15.91■□□□□ 0.14
SNX13-204ENST00000444712 WDR91A4D1P6 747 aa15.91■□□□□ 0.14
SNX13-204ENST00000444712 J3KR12 359 aa15.91■□□□□ 0.14
SNX13-204ENST00000444712 TPP1O14773 563 aa15.91■□□□□ 0.14
SNX13-204ENST00000444712 PRAMEF11O60813 436 aa15.91■□□□□ 0.14
SNX13-204ENST00000444712 PMPCBO75439 489 aa15.91■□□□□ 0.14
SNX13-204ENST00000444712 CLDN11O75508 207 aa15.91■□□□□ 0.14
SNX13-204ENST00000444712 LATS1O95835 1130 aa15.91■□□□□ 0.14
SNX13-204ENST00000444712 MPOP05164 745 aa15.91■□□□□ 0.14
SNX13-204ENST00000444712 TPH1P17752 444 aa15.91■□□□□ 0.14
SNX13-204ENST00000444712 WNT3AP56704 352 aa15.91■□□□□ 0.14
SNX13-204ENST00000444712 ITKQ08881 620 aa15.91■□□□□ 0.14
SNX13-204ENST00000444712 LBRQ14739 615 aaKnown RBP15.91■□□□□ 0.14
SNX13-204ENST00000444712 DENND5AQ6IQ26 1287 aa15.91■□□□□ 0.14
SNX13-204ENST00000444712 KDELC1Q6UW63 502 aa15.91■□□□□ 0.14
SNX13-204ENST00000444712 CHST9Q7L1S5 443 aa15.91■□□□□ 0.14
SNX13-204ENST00000444712 PAWRQ96IZ0 340 aaKnown RBP15.91■□□□□ 0.14
SNX13-204ENST00000444712 RANBP9Q96S59 729 aa15.91■□□□□ 0.14
SNX13-204ENST00000444712 YME1L1Q96TA2 773 aa15.91■□□□□ 0.14
SNX13-204ENST00000444712 SLCO1B3Q9NPD5 702 aa15.91■□□□□ 0.14
SNX13-204ENST00000444712 PCDHB12Q9Y5F1 795 aa15.91■□□□□ 0.14
SNX13-204ENST00000444712 PSAT1Q9Y617 370 aa15.91■□□□□ 0.14
SNX13-204ENST00000444712 PTPRSQ13332 1948 aa15.91■□□□□ 0.14
SNX13-204ENST00000444712 HEATR9A2RTY3 570 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms