RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 VSIG1Q86XK7 387 aa12.56□□□□□ -0.4
USP1-203ENST00000442679 RFX6Q8HWS3 928 aa12.56□□□□□ -0.4
USP1-203ENST00000442679 MMAAQ8IVH4 418 aaKnown RBP12.56□□□□□ -0.4
USP1-203ENST00000442679 RCOR2Q8IZ40 523 aa12.56□□□□□ -0.4
USP1-203ENST00000442679 SYCE1Q8N0S2 351 aa12.56□□□□□ -0.4
USP1-203ENST00000442679 FAM160A2Q8N612 972 aaPredicted RBP12.56□□□□□ -0.4
USP1-203ENST00000442679 PCDH20Q8N6Y1 951 aaKnown RBP12.56□□□□□ -0.4
USP1-203ENST00000442679 FRMD1Q8N878 549 aa12.56□□□□□ -0.4
USP1-203ENST00000442679 OR2A12Q8NGT7 310 aa12.56□□□□□ -0.4
USP1-203ENST00000442679 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.56□□□□□ -0.4
USP1-203ENST00000442679 CASKIN2Q8WXE0 1202 aa12.56□□□□□ -0.4
USP1-203ENST00000442679 KRT35Q92764 455 aa12.56□□□□□ -0.4
USP1-203ENST00000442679 SPACA7Q96KW9 195 aa12.56□□□□□ -0.4
USP1-203ENST00000442679 PHOX2BQ99453 314 aa12.56□□□□□ -0.4
USP1-203ENST00000442679 EPC1Q9H2F5 836 aa12.56□□□□□ -0.4
USP1-203ENST00000442679 SEMA4AQ9H3S1 761 aa12.56□□□□□ -0.4
USP1-203ENST00000442679 SP110Q9HB58 689 aa12.56□□□□□ -0.4
USP1-203ENST00000442679 UBA2Q9UBT2 640 aaPredicted RBP12.56□□□□□ -0.4
USP1-203ENST00000442679 IPO11Q9UI26 975 aaKnown RBP12.56□□□□□ -0.4
USP1-203ENST00000442679 AMFRQ9UKV5 643 aa12.56□□□□□ -0.4
USP1-203ENST00000442679 PCDHA3Q9Y5H8 950 aa12.56□□□□□ -0.4
USP1-203ENST00000442679 CCDC66A2RUB6 948 aa12.55□□□□□ -0.4
USP1-203ENST00000442679 MCF2LO15068 1137 aa12.55□□□□□ -0.4
USP1-203ENST00000442679 ALOX15BO15296 676 aa12.55□□□□□ -0.4
USP1-203ENST00000442679 TMCC1O94876 653 aa12.55□□□□□ -0.4
USP1-203ENST00000442679 ADH1BP00325 375 aa12.55□□□□□ -0.4
USP1-203ENST00000442679 C7P10643 843 aa12.55□□□□□ -0.4
USP1-203ENST00000442679 OXTRP30559 389 aa12.55□□□□□ -0.4
USP1-203ENST00000442679 CHRNA3P32297 505 aa12.55□□□□□ -0.4
USP1-203ENST00000442679 SLC8A1P32418 973 aa12.55□□□□□ -0.4
USP1-203ENST00000442679 CTNNA1P35221 906 aaKnown RBP12.55□□□□□ -0.4
USP1-203ENST00000442679 PSMD8P48556 350 aa12.55□□□□□ -0.4
USP1-203ENST00000442679 TPMTP51580 245 aa12.55□□□□□ -0.4
USP1-203ENST00000442679 IL10RBQ08334 325 aa12.55□□□□□ -0.4
USP1-203ENST00000442679 CYTH1Q15438 398 aa12.55□□□□□ -0.4
USP1-203ENST00000442679 SPOCD1Q6ZMY3 1216 aa12.55□□□□□ -0.4
USP1-203ENST00000442679 DPY19L3Q6ZPD9 716 aa12.55□□□□□ -0.4
USP1-203ENST00000442679 ZNF662Q6ZS27 426 aa12.55□□□□□ -0.4
USP1-203ENST00000442679 PEX26Q7Z412 305 aa12.55□□□□□ -0.4
USP1-203ENST00000442679 NT5DC3Q86UY8 548 aa12.55□□□□□ -0.4
USP1-203ENST00000442679 KBTBD6Q86V97 674 aa12.55□□□□□ -0.4
USP1-203ENST00000442679 C11orf74Q86VG3 221 aa12.55□□□□□ -0.4
USP1-203ENST00000442679 ATPAF2Q8N5M1 289 aa12.55□□□□□ -0.4
USP1-203ENST00000442679 CHST14Q8NCH0 376 aa12.55□□□□□ -0.4
USP1-203ENST00000442679 EXD1Q8NHP7 514 aa12.55□□□□□ -0.4
USP1-203ENST00000442679 GANCQ8TET4 914 aa12.55□□□□□ -0.4
USP1-203ENST00000442679 PABPC3Q9H361 631 aaKnown RBP12.55□□□□□ -0.4
USP1-203ENST00000442679 PDFQ9HBH1 243 aa12.55□□□□□ -0.4
USP1-203ENST00000442679 CD93Q9NPY3 652 aa12.55□□□□□ -0.4
USP1-203ENST00000442679 LZTFL1Q9NQ48 299 aa12.55□□□□□ -0.4
USP1-203ENST00000442679 USP36Q9P275 1121 aaKnown RBP12.55□□□□□ -0.4
USP1-203ENST00000442679 MBD1Q9UIS9 605 aaPredicted RBP12.55□□□□□ -0.4
USP1-203ENST00000442679 RAB23Q9ULC3 237 aa12.55□□□□□ -0.4
USP1-203ENST00000442679 PPM1HQ9ULR3 514 aa12.55□□□□□ -0.4
USP1-203ENST00000442679 SCML1Q9UN30 329 aa12.55□□□□□ -0.4
USP1-203ENST00000442679 PPP2R2CQ9Y2T4 447 aa12.55□□□□□ -0.4
USP1-203ENST00000442679 IGHV1OR15-9A0A0B4J2B8 117 aa12.54□□□□□ -0.4
USP1-203ENST00000442679 PROB1E7EW31 1015 aa12.54□□□□□ -0.4
USP1-203ENST00000442679 APOL1O14791 398 aa12.54□□□□□ -0.4
USP1-203ENST00000442679 MID1O15344 667 aa12.54□□□□□ -0.4
USP1-203ENST00000442679 MFSD11O43934 449 aa12.54□□□□□ -0.4
USP1-203ENST00000442679 MAFKO60675 156 aa12.54□□□□□ -0.4
USP1-203ENST00000442679 FTCDO95954 541 aa12.54□□□□□ -0.4
USP1-203ENST00000442679 GSRP00390 522 aa12.54□□□□□ -0.4
USP1-203ENST00000442679 KRT10P13645 584 aa12.54□□□□□ -0.4
USP1-203ENST00000442679 ZFXP17010 805 aaPredicted RBP12.54□□□□□ -0.4
USP1-203ENST00000442679 BCKDHBP21953 392 aa12.54□□□□□ -0.4
USP1-203ENST00000442679 CTNNA2P26232 953 aa12.54□□□□□ -0.4
USP1-203ENST00000442679 CDKN2BP42772 138 aa12.54□□□□□ -0.4
USP1-203ENST00000442679 PEX5P50542 639 aa12.54□□□□□ -0.4
USP1-203ENST00000442679 RHOAP61586 193 aa12.54□□□□□ -0.4
USP1-203ENST00000442679 SNRPD1P62314 119 aaKnown RBP12.54□□□□□ -0.4
USP1-203ENST00000442679 GBE1Q04446 702 aa12.54□□□□□ -0.4
USP1-203ENST00000442679 GALNT2Q10471 571 aa12.54□□□□□ -0.4
USP1-203ENST00000442679 SFSWAPQ12872 951 aaKnown RBP12.54□□□□□ -0.4
USP1-203ENST00000442679 RFTN1Q14699 578 aaPredicted RBP12.54□□□□□ -0.4
USP1-203ENST00000442679 LLGL1Q15334 1064 aa12.54□□□□□ -0.4
USP1-203ENST00000442679 LPAL2Q16609 132 aa12.54□□□□□ -0.4
USP1-203ENST00000442679 TAZQ16635 292 aa12.54□□□□□ -0.4
USP1-203ENST00000442679 PLK5Q496M5 336 aa12.54□□□□□ -0.4
USP1-203ENST00000442679 TTC31Q49AM3 519 aaPredicted RBP12.54□□□□□ -0.4
USP1-203ENST00000442679 ARSIQ5FYB1 569 aa12.54□□□□□ -0.4
USP1-203ENST00000442679 FAM46CQ5VWP2 391 aa12.54□□□□□ -0.4
USP1-203ENST00000442679 SLC9A4Q6AI14 798 aa12.54□□□□□ -0.4
USP1-203ENST00000442679 SLC36A4Q6YBV0 504 aa12.54□□□□□ -0.4
USP1-203ENST00000442679 FAM124AQ86V42 546 aa12.54□□□□□ -0.4
USP1-203ENST00000442679 LRRC49Q8IUZ0 686 aa12.54□□□□□ -0.4
USP1-203ENST00000442679 CCDC50Q8IVM0 306 aa12.54□□□□□ -0.4
USP1-203ENST00000442679 PLPP6Q8IY26 295 aa12.54□□□□□ -0.4
USP1-203ENST00000442679 RYBPQ8N488 228 aaPredicted RBP12.54□□□□□ -0.4
USP1-203ENST00000442679 PLD5Q8N7P1 536 aa12.54□□□□□ -0.4
USP1-203ENST00000442679 PIP4K2CQ8TBX8 421 aa12.54□□□□□ -0.4
USP1-203ENST00000442679 NKD2Q969F2 451 aaPredicted RBP12.54□□□□□ -0.4
USP1-203ENST00000442679 RBM41Q96IZ5 413 aaKnown RBP12.54□□□□□ -0.4
USP1-203ENST00000442679 OMDQ99983 421 aa12.54□□□□□ -0.4
USP1-203ENST00000442679 HEPHQ9BQS7 1158 aa12.54□□□□□ -0.4
USP1-203ENST00000442679 TM6SF2Q9BZW4 377 aa12.54□□□□□ -0.4
USP1-203ENST00000442679 DUSP15Q9H1R2 295 aaPredicted RBP12.54□□□□□ -0.4
USP1-203ENST00000442679 KCNF1Q9H3M0 494 aa12.54□□□□□ -0.4
USP1-203ENST00000442679 FBXL12Q9NXK8 326 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms