RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 AGGF1Q8N302 714 aaeCLIP9.32□□□□□ -0.92
HDAC6-209ENST00000440653 NPWQ8N729 165 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 PDCD7Q8N8D1 485 aaKnown RBP9.32□□□□□ -0.92
HDAC6-209ENST00000440653 FLCNQ8NFG4 579 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 GABPB2Q8TAK5 448 aaPredicted RBP9.32□□□□□ -0.92
HDAC6-209ENST00000440653 ADAM32Q8TC27 787 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 SPPL2BQ8TCT7 592 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 HASPINQ8TF76 798 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 NDRG1Q92597 394 aaKnown RBP9.32□□□□□ -0.92
HDAC6-209ENST00000440653 SEPT8Q92599 483 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 ISL2Q96A47 359 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 CERS2Q96G23 380 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 SRPK1Q96SB4 655 aaKnown RBP9.32□□□□□ -0.92
HDAC6-209ENST00000440653 CPNE1Q99829 537 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 FAM96AQ9H5X1 160 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 RETREG1Q9H6L5 497 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 CASS4Q9NQ75 786 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 TMLHEQ9NVH6 421 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 CLIC5Q9NZA1 410 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 ZFATQ9P243 1243 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 MID2Q9UJV3 735 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 VANGL2Q9ULK5 521 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 NEU3Q9UQ49 428 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 TLR6Q9Y2C9 796 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 AAR2Q9Y312 384 aaKnown RBP9.32□□□□□ -0.92
HDAC6-209ENST00000440653 MFHAS1Q9Y4C4 1052 aa9.32□□□□□ -0.92
HDAC6-209ENST00000440653 FAM237BA0A1B0GVD1 139 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 FAM92AA1XBS5 289 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 ARHGAP42A6NI28 874 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 C2CD2LO14523 706 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 CACNG3O60359 315 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 UPP2O95045 317 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 PYGBP11216 843 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 CRHR1P34998 444 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 CTNNB1P35222 781 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 SERPINB4P48594 390 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 SERPINB8P50452 374 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 KPNA1P52294 538 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-209ENST00000440653 GEMP55040 296 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 MBTPS1Q14703 1052 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 INSCQ1MX18 579 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 TEX44Q53QW1 395 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 VARS2Q5ST30 1063 aaKnown RBP9.31□□□□□ -0.92
HDAC6-209ENST00000440653 KCTD11Q693B1 232 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 CGB2Q6NT52 195 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 FAM47EQ6ZV65 393 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 SH2D5Q6ZV89 423 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 PID1Q7Z2X4 250 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 LRRC43Q8N309 656 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 RTL3Q8N8U3 475 aaKnown RBP9.31□□□□□ -0.92
HDAC6-209ENST00000440653 CCDC63Q8NA47 563 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 DTWD2Q8NBA8 298 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.31□□□□□ -0.92
HDAC6-209ENST00000440653 EDEM1Q92611 657 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 ZNF75CPQ92670 426 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-209ENST00000440653 MRRFQ96E11 262 aaKnown RBP9.31□□□□□ -0.92
HDAC6-209ENST00000440653 SPATA17Q96L03 361 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 C1orf74Q96LT6 269 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 TEKT5Q96M29 485 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 C7orf26Q96N11 449 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 YME1L1Q96TA2 773 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 TSSK1BQ9BXA7 367 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 TRIM55Q9BYV6 548 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 RHOBTB2Q9BYZ6 727 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 MFSD1Q9H3U5 465 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 MANSC1Q9H8J5 431 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 PLAC1Q9HBJ0 212 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 MRM3Q9HC36 420 aaKnown RBP9.31□□□□□ -0.92
HDAC6-209ENST00000440653 SYBUQ9NX95 663 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 ABI2Q9NYB9 513 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-209ENST00000440653 PPARGC1AQ9UBK2 798 aaKnown RBP9.31□□□□□ -0.92
HDAC6-209ENST00000440653 TTC3P53804 2025 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 MYLKQ15746 1914 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 KIAA1671Q9BY89 1806 aa9.31□□□□□ -0.92
HDAC6-209ENST00000440653 WDR27A2RRH5 827 aa9.3□□□□□ -0.92
HDAC6-209ENST00000440653 FAM72CH0Y354 149 aa9.3□□□□□ -0.92
HDAC6-209ENST00000440653 I6L893 689 aaPredicted RBP9.3□□□□□ -0.92
HDAC6-209ENST00000440653 KCNK1O00180 336 aa9.3□□□□□ -0.92
HDAC6-209ENST00000440653 TIMM44O43615 452 aa9.3□□□□□ -0.92
HDAC6-209ENST00000440653 H2AFYO75367 372 aaKnown RBP9.3□□□□□ -0.92
HDAC6-209ENST00000440653 PAGE1O75459 146 aa9.3□□□□□ -0.92
HDAC6-209ENST00000440653 TADA2AO75478 443 aa9.3□□□□□ -0.92
HDAC6-209ENST00000440653 ITGB1P05556 798 aa9.3□□□□□ -0.92
HDAC6-209ENST00000440653 LINC00271P0C7V0 271 aa9.3□□□□□ -0.92
HDAC6-209ENST00000440653 NEFHP12036 1026 aa9.3□□□□□ -0.92
HDAC6-209ENST00000440653 CCNB1P14635 433 aa9.3□□□□□ -0.92
HDAC6-209ENST00000440653 NFKB1P19838 968 aa9.3□□□□□ -0.92
HDAC6-209ENST00000440653 DNAJB1P25685 340 aa9.3□□□□□ -0.92
HDAC6-209ENST00000440653 MGAT1P26572 445 aa9.3□□□□□ -0.92
HDAC6-209ENST00000440653 SPRP35270 261 aaPredicted RBP9.3□□□□□ -0.92
HDAC6-209ENST00000440653 OR1G1P47890 313 aa9.3□□□□□ -0.92
HDAC6-209ENST00000440653 RASSF2P50749 326 aa9.3□□□□□ -0.92
HDAC6-209ENST00000440653 NDST2P52849 883 aa9.3□□□□□ -0.92
HDAC6-209ENST00000440653 SESN2P58004 480 aaPredicted RBP9.3□□□□□ -0.92
HDAC6-209ENST00000440653 RPL10AP62906 217 aaKnown RBP9.3□□□□□ -0.92
HDAC6-209ENST00000440653 RING1Q06587 406 aa9.3□□□□□ -0.92
HDAC6-209ENST00000440653 DMWDQ09019 674 aa9.3□□□□□ -0.92
HDAC6-209ENST00000440653 MTM1Q13496 603 aa9.3□□□□□ -0.92
HDAC6-209ENST00000440653 UGP2Q16851 508 aa9.3□□□□□ -0.92
HDAC6-209ENST00000440653 GALNTL6Q49A17 601 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms