RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 SHROOM3Q8TF72 1996 aa18.06■□□□□ 0.48
CCDC188-201ENST00000439765 IGHV1OR15-9A0A0B4J2B8 117 aa18.06■□□□□ 0.48
CCDC188-201ENST00000439765 MAP3K13O43283 966 aa18.06■□□□□ 0.48
CCDC188-201ENST00000439765 SRCP12931 536 aa18.06■□□□□ 0.48
CCDC188-201ENST00000439765 MSNP26038 577 aaKnown RBP18.06■□□□□ 0.48
CCDC188-201ENST00000439765 ETFBP38117 255 aa18.06■□□□□ 0.48
CCDC188-201ENST00000439765 TPMTP51580 245 aa18.06■□□□□ 0.48
CCDC188-201ENST00000439765 RPS14P62263 151 aaKnown RBP18.06■□□□□ 0.48
CCDC188-201ENST00000439765 ARF5P84085 180 aa18.06■□□□□ 0.48
CCDC188-201ENST00000439765 RPL6Q02878 288 aaKnown RBP18.06■□□□□ 0.48
CCDC188-201ENST00000439765 POLD3Q15054 466 aaPredicted RBP18.06■□□□□ 0.48
CCDC188-201ENST00000439765 DLG2Q15700 870 aa18.06■□□□□ 0.48
CCDC188-201ENST00000439765 ZNF776Q68DI1 518 aaPredicted RBP18.06■□□□□ 0.48
CCDC188-201ENST00000439765 RFX8Q6ZV50 586 aa18.06■□□□□ 0.48
CCDC188-201ENST00000439765 ZNF354CQ86Y25 554 aa18.06■□□□□ 0.48
CCDC188-201ENST00000439765 PSTKQ8IV42 348 aaKnown RBP18.06■□□□□ 0.48
CCDC188-201ENST00000439765 STK40Q8N2I9 435 aa18.06■□□□□ 0.48
CCDC188-201ENST00000439765 FRS2Q8WU20 508 aa18.06■□□□□ 0.48
CCDC188-201ENST00000439765 PTPRN2Q92932 1015 aa18.06■□□□□ 0.48
CCDC188-201ENST00000439765 ARHGEF2Q92974 986 aaKnown RBP18.06■□□□□ 0.48
CCDC188-201ENST00000439765 USP36Q9P275 1121 aaKnown RBP18.06■□□□□ 0.48
CCDC188-201ENST00000439765 LCMT1Q9UIC8 334 aa18.06■□□□□ 0.48
CCDC188-201ENST00000439765 ACTL7AQ9Y615 435 aa18.06■□□□□ 0.48
CCDC188-201ENST00000439765 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.05■□□□□ 0.48
CCDC188-201ENST00000439765 KHNYNO15037 678 aaKnown RBP18.05■□□□□ 0.48
CCDC188-201ENST00000439765 DAPK3O43293 454 aa18.05■□□□□ 0.48
CCDC188-201ENST00000439765 SMAD6O43541 496 aaKnown RBP18.05■□□□□ 0.48
CCDC188-201ENST00000439765 ATP9BO43861 1147 aa18.05■□□□□ 0.48
CCDC188-201ENST00000439765 BUB1BO60566 1050 aaPredicted RBP18.05■□□□□ 0.48
CCDC188-201ENST00000439765 PROSCO94903 275 aa18.05■□□□□ 0.48
CCDC188-201ENST00000439765 RARAP10276 462 aa18.05■□□□□ 0.48
CCDC188-201ENST00000439765 HTR7P34969 479 aa18.05■□□□□ 0.48
CCDC188-201ENST00000439765 DPP6P42658 865 aa18.05■□□□□ 0.48
CCDC188-201ENST00000439765 PSMD8P48556 350 aa18.05■□□□□ 0.48
CCDC188-201ENST00000439765 ELAVL3Q14576 367 aaKnown RBP18.05■□□□□ 0.48
CCDC188-201ENST00000439765 MESDQ14696 234 aa18.05■□□□□ 0.48
CCDC188-201ENST00000439765 PEAR1Q5VY43 1037 aaPredicted RBP18.05■□□□□ 0.48
CCDC188-201ENST00000439765 FAM124AQ86V42 546 aa18.05■□□□□ 0.48
CCDC188-201ENST00000439765 MMAAQ8IVH4 418 aaKnown RBP18.05■□□□□ 0.48
CCDC188-201ENST00000439765 TMEFF1Q8IYR6 380 aa18.05■□□□□ 0.48
CCDC188-201ENST00000439765 DEFB119Q8N690 84 aa18.05■□□□□ 0.48
CCDC188-201ENST00000439765 RSPH9Q9H1X1 276 aaPredicted RBP18.05■□□□□ 0.48
CCDC188-201ENST00000439765 RETREG1Q9H6L5 497 aa18.05■□□□□ 0.48
CCDC188-201ENST00000439765 NOL6Q9H6R4 1146 aaKnown RBP18.05■□□□□ 0.48
CCDC188-201ENST00000439765 KLHL11Q9NVR0 708 aa18.05■□□□□ 0.48
CCDC188-201ENST00000439765 CWC15Q9P013 229 aaKnown RBP18.05■□□□□ 0.48
CCDC188-201ENST00000439765 EVLQ9UI08 416 aaPredicted RBP18.05■□□□□ 0.48
CCDC188-201ENST00000439765 CAPN6Q9Y6Q1 641 aa18.05■□□□□ 0.48
CCDC188-201ENST00000439765 TARSL2A2RTX5 802 aaKnown RBP18.04■□□□□ 0.48
CCDC188-201ENST00000439765 GRID2IPA4D2P6 1211 aa18.04■□□□□ 0.48
CCDC188-201ENST00000439765 KIF5CO60282 957 aa18.04■□□□□ 0.48
CCDC188-201ENST00000439765 ZMPSTE24O75844 475 aa18.04■□□□□ 0.48
CCDC188-201ENST00000439765 DNTTP04053 509 aa18.04■□□□□ 0.48
CCDC188-201ENST00000439765 PTGER3P43115 390 aa18.04■□□□□ 0.48
CCDC188-201ENST00000439765 SERPINH1P50454 418 aaKnown RBP18.04■□□□□ 0.48
CCDC188-201ENST00000439765 DPYSL2Q16555 572 aa18.04■□□□□ 0.48
CCDC188-201ENST00000439765 TTC31Q49AM3 519 aaPredicted RBP18.04■□□□□ 0.48
CCDC188-201ENST00000439765 RETSATQ6NUM9 610 aa18.04■□□□□ 0.48
CCDC188-201ENST00000439765 C22orf39Q6P5X5 142 aa18.04■□□□□ 0.48
CCDC188-201ENST00000439765 SLC36A4Q6YBV0 504 aa18.04■□□□□ 0.48
CCDC188-201ENST00000439765 LEKR1Q6ZMV7 388 aa18.04■□□□□ 0.48
CCDC188-201ENST00000439765 PIGKQ92643 395 aa18.04■□□□□ 0.48
CCDC188-201ENST00000439765 HMCESQ96FZ2 354 aa18.04■□□□□ 0.48
CCDC188-201ENST00000439765 ACE2Q9BYF1 805 aaPredicted RBP18.04■□□□□ 0.48
CCDC188-201ENST00000439765 MAGEH1Q9H213 219 aa18.04■□□□□ 0.48
CCDC188-201ENST00000439765 TNKS2Q9H2K2 1166 aa18.04■□□□□ 0.48
CCDC188-201ENST00000439765 CEP295Q9C0D2 2601 aa18.04■□□□□ 0.48
CCDC188-201ENST00000439765 WASH4PA8MWX3 477 aa18.03■□□□□ 0.48
CCDC188-201ENST00000439765 PATE3B3GLJ2 98 aa18.03■□□□□ 0.48
CCDC188-201ENST00000439765 RNASEH1O60930 286 aaKnown RBP18.03■□□□□ 0.48
CCDC188-201ENST00000439765 PALMO75781 387 aa18.03■□□□□ 0.48
CCDC188-201ENST00000439765 CD6P30203 668 aa18.03■□□□□ 0.48
CCDC188-201ENST00000439765 HOXD12P35452 270 aa18.03■□□□□ 0.48
CCDC188-201ENST00000439765 ARL4AP40617 200 aa18.03■□□□□ 0.48
CCDC188-201ENST00000439765 VASPP50552 380 aaPredicted RBP18.03■□□□□ 0.48
CCDC188-201ENST00000439765 CST6Q15828 149 aa18.03■□□□□ 0.48
CCDC188-201ENST00000439765 BOLA3Q53S33 107 aa18.03■□□□□ 0.48
CCDC188-201ENST00000439765 SYT12Q8IV01 421 aa18.03■□□□□ 0.48
CCDC188-201ENST00000439765 NPWQ8N729 165 aa18.03■□□□□ 0.48
CCDC188-201ENST00000439765 LRRC57Q8N9N7 239 aa18.03■□□□□ 0.48
CCDC188-201ENST00000439765 NETO2Q8NC67 525 aa18.03■□□□□ 0.48
CCDC188-201ENST00000439765 TRIM58Q8NG06 486 aa18.03■□□□□ 0.48
CCDC188-201ENST00000439765 TEKT4Q8WW24 435 aa18.03■□□□□ 0.48
CCDC188-201ENST00000439765 CELF6Q96J87 481 aaKnown RBP18.03■□□□□ 0.48
CCDC188-201ENST00000439765 ITM2CQ9NQX7 267 aa18.03■□□□□ 0.48
CCDC188-201ENST00000439765 HPCAL4Q9UM19 191 aa18.03■□□□□ 0.48
CCDC188-201ENST00000439765 FCF1Q9Y324 198 aaKnown RBP18.03■□□□□ 0.48
CCDC188-201ENST00000439765 ALG6Q9Y672 507 aa18.03■□□□□ 0.48
CCDC188-201ENST00000439765 CABIN1Q9Y6J0 2220 aa18.03■□□□□ 0.48
CCDC188-201ENST00000439765 ANKRD36A6QL64 1941 aa18.02■□□□□ 0.48
CCDC188-201ENST00000439765 RASA4BC9J798 803 aa18.02■□□□□ 0.48
CCDC188-201ENST00000439765 H3BRJ5 948 aa18.02■□□□□ 0.48
CCDC188-201ENST00000439765 MID1O15344 667 aa18.02■□□□□ 0.48
CCDC188-201ENST00000439765 RASA4O43374 803 aa18.02■□□□□ 0.48
CCDC188-201ENST00000439765 IL1BP01584 269 aa18.02■□□□□ 0.48
CCDC188-201ENST00000439765 ERCC2P18074 760 aa18.02■□□□□ 0.48
CCDC188-201ENST00000439765 MAN1A1P33908 653 aa18.02■□□□□ 0.48
CCDC188-201ENST00000439765 CLCN6P51797 869 aa18.02■□□□□ 0.48
CCDC188-201ENST00000439765 TAS2R40P59535 323 aa18.02■□□□□ 0.48
CCDC188-201ENST00000439765 DPYSQ14117 519 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms