RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 LIG3P49916 1009 aa11.96□□□□□ -0.49
SMAD3-202ENST00000439724 DEFB103AP81534 67 aa11.96□□□□□ -0.49
SMAD3-202ENST00000439724 CCDC15Q0P6D6 951 aa11.96□□□□□ -0.49
SMAD3-202ENST00000439724 SERINC3Q13530 473 aa11.96□□□□□ -0.49
SMAD3-202ENST00000439724 RAB33AQ14088 237 aa11.96□□□□□ -0.49
SMAD3-202ENST00000439724 POLD3Q15054 466 aaPredicted RBP11.96□□□□□ -0.49
SMAD3-202ENST00000439724 SPOUT1Q5T280 376 aaKnown RBP11.96□□□□□ -0.49
SMAD3-202ENST00000439724 MARC1Q5VT66 337 aa11.96□□□□□ -0.49
SMAD3-202ENST00000439724 PDPK2PQ6A1A2 396 aa11.96□□□□□ -0.49
SMAD3-202ENST00000439724 RANBP10Q6VN20 620 aa11.96□□□□□ -0.49
SMAD3-202ENST00000439724 DDX53Q86TM3 631 aaKnown RBP11.96□□□□□ -0.49
SMAD3-202ENST00000439724 GPR65Q8IYL9 337 aa11.96□□□□□ -0.49
SMAD3-202ENST00000439724 PPHLN1Q8NEY8 458 aaKnown RBP11.96□□□□□ -0.49
SMAD3-202ENST00000439724 RAB3IL1Q8TBN0 382 aa11.96□□□□□ -0.49
SMAD3-202ENST00000439724 NSMCE1Q8WV22 266 aa11.96□□□□□ -0.49
SMAD3-202ENST00000439724 C10orf82Q8WW14 230 aa11.96□□□□□ -0.49
SMAD3-202ENST00000439724 PPM1EQ8WY54 764 aa11.96□□□□□ -0.49
SMAD3-202ENST00000439724 PTPRN2Q92932 1015 aa11.96□□□□□ -0.49
SMAD3-202ENST00000439724 RMDN2Q96LZ7 410 aa11.96□□□□□ -0.49
SMAD3-202ENST00000439724 MCMBPQ9BTE3 642 aa11.96□□□□□ -0.49
SMAD3-202ENST00000439724 FSD1LQ9BXM9 530 aa11.96□□□□□ -0.49
SMAD3-202ENST00000439724 SLC13A1Q9BZW2 595 aa11.96□□□□□ -0.49
SMAD3-202ENST00000439724 ARNT2Q9HBZ2 717 aa11.96□□□□□ -0.49
SMAD3-202ENST00000439724 ATP13A1Q9HD20 1204 aa11.96□□□□□ -0.49
SMAD3-202ENST00000439724 CHRAC1Q9NRG0 131 aa11.96□□□□□ -0.49
SMAD3-202ENST00000439724 WBP1LQ9NX94 342 aa11.96□□□□□ -0.49
SMAD3-202ENST00000439724 SPG21Q9NZD8 308 aa11.96□□□□□ -0.49
SMAD3-202ENST00000439724 SIRPGQ9P1W8 387 aa11.96□□□□□ -0.49
SMAD3-202ENST00000439724 SLC12A4Q9UP95 1085 aa11.96□□□□□ -0.49
SMAD3-202ENST00000439724 USH1CQ9Y6N9 552 aa11.96□□□□□ -0.49
SMAD3-202ENST00000439724 KIAA1671Q9BY89 1806 aa11.96□□□□□ -0.49
SMAD3-202ENST00000439724 COCHO43405 550 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 PMPCBO75439 489 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 GJB5O95377 273 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 TIMP1P01033 207 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 URODP06132 367 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 TROVE2P10155 538 aaKnown RBP eCLIP11.96□□□□□ -0.5
SMAD3-202ENST00000439724 OR1E1P30953 314 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 SLC6A4P31645 630 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 SCTRP47872 440 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 ALDH1A3P47895 512 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 GJA8P48165 433 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 PPP3CCP48454 512 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 SLC11A2P49281 568 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 HARS2P49590 506 aaKnown RBP11.96□□□□□ -0.5
SMAD3-202ENST00000439724 SERPINB8P50452 374 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 WNT3AP56704 352 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 WDR5P61964 334 aaKnown RBP11.96□□□□□ -0.5
SMAD3-202ENST00000439724 PDE1BQ01064 536 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 SLC10A7Q0GE19 358 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 PDE1CQ14123 709 aaPredicted RBP11.96□□□□□ -0.5
SMAD3-202ENST00000439724 BTG3Q14201 252 aaPredicted RBP11.96□□□□□ -0.5
SMAD3-202ENST00000439724 VEPH1Q14D04 833 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 INSCQ1MX18 579 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 GALNTL6Q49A17 601 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 HSP90AA5PQ58FG0 334 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 FAM133BQ5BKY9 247 aaKnown RBP11.96□□□□□ -0.5
SMAD3-202ENST00000439724 FYB2Q5VWT5 728 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 STRA8Q7Z7C7 330 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 CIR1Q86X95 450 aaPredicted RBP11.96□□□□□ -0.5
SMAD3-202ENST00000439724 C10orf67Q8IYJ2 551 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 LGI2Q8N0V4 545 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.96□□□□□ -0.5
SMAD3-202ENST00000439724 ARMC2Q8NEN0 867 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 ATP2A3Q93084 1043 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 PSMG2Q969U7 264 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 TADA1Q96BN2 335 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 ARMC5Q96C12 935 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 MYEOVQ96EZ4 313 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 TSSK1BQ9BXA7 367 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 C11orf49Q9H6J7 331 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 CYP4F11Q9HBI6 524 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 RXFP1Q9HBX9 757 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 NT5MQ9NPB1 228 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 C20orf96Q9NUD7 363 aaPredicted RBP11.96□□□□□ -0.5
SMAD3-202ENST00000439724 IL1RAPL1Q9NZN1 696 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 TRPM5Q9NZQ8 1165 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 DCDC2Q9UHG0 476 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 MAFFQ9ULX9 164 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 TCAF1Q9Y4C2 921 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 ANAPC1Q9H1A4 1944 aa11.96□□□□□ -0.5
SMAD3-202ENST00000439724 PLXNA4Q9HCM2 1894 aa11.95□□□□□ -0.5
SMAD3-202ENST00000439724 CENPFP49454 3210 aa11.95□□□□□ -0.5
SMAD3-202ENST00000439724 PCNTO95613 3336 aa11.95□□□□□ -0.5
SMAD3-202ENST00000439724 KIAA0355O15063 1070 aa11.95□□□□□ -0.5
SMAD3-202ENST00000439724 TIMM44O43615 452 aa11.95□□□□□ -0.5
SMAD3-202ENST00000439724 PRAMEF11O60813 436 aa11.95□□□□□ -0.5
SMAD3-202ENST00000439724 TGDSO95455 350 aa11.95□□□□□ -0.5
SMAD3-202ENST00000439724 BGNP21810 368 aa11.95□□□□□ -0.5
SMAD3-202ENST00000439724 HADHAP40939 763 aa11.95□□□□□ -0.5
SMAD3-202ENST00000439724 LRRC26Q2I0M4 334 aa11.95□□□□□ -0.5
SMAD3-202ENST00000439724 RABGAP1LQ5R372 815 aa11.95□□□□□ -0.5
SMAD3-202ENST00000439724 TMCO4Q5TGY1 634 aa11.95□□□□□ -0.5
SMAD3-202ENST00000439724 FBXO46Q6PJ61 603 aaPredicted RBP11.95□□□□□ -0.5
SMAD3-202ENST00000439724 CNTN4Q8IWV2 1026 aa11.95□□□□□ -0.5
SMAD3-202ENST00000439724 PABPC5Q96DU9 382 aaKnown RBP11.95□□□□□ -0.5
SMAD3-202ENST00000439724 ZNF599Q96NL3 588 aa11.95□□□□□ -0.5
SMAD3-202ENST00000439724 KLHL5Q96PQ7 755 aa11.95□□□□□ -0.5
SMAD3-202ENST00000439724 RANBP9Q96S59 729 aa11.95□□□□□ -0.5
SMAD3-202ENST00000439724 AGAP2Q99490 1192 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms