RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 TRIM24O15164 1050 aa21.07■□□□□ 0.96
CHD3-204ENST00000439235 TIMM44O43615 452 aa21.07■□□□□ 0.96
CHD3-204ENST00000439235 APODP05090 189 aa21.07■□□□□ 0.96
CHD3-204ENST00000439235 FDFT1P37268 417 aa21.07■□□□□ 0.96
CHD3-204ENST00000439235 ADCY8P40145 1251 aa21.07■□□□□ 0.96
CHD3-204ENST00000439235 GRIA2P42262 883 aa21.07■□□□□ 0.96
CHD3-204ENST00000439235 SERPINH1P50454 418 aaKnown RBP21.07■□□□□ 0.96
CHD3-204ENST00000439235 ECT2LQ008S8 904 aa21.07■□□□□ 0.96
CHD3-204ENST00000439235 GUCY2DQ02846 1103 aa21.07■□□□□ 0.96
CHD3-204ENST00000439235 LINGO4Q6UY18 593 aa21.07■□□□□ 0.96
CHD3-204ENST00000439235 PRUNE1Q86TP1 453 aa21.07■□□□□ 0.96
CHD3-204ENST00000439235 RALGPS2Q86X27 583 aaPredicted RBP21.07■□□□□ 0.96
CHD3-204ENST00000439235 ATXN2LQ8WWM7 1075 aaKnown RBP21.07■□□□□ 0.96
CHD3-204ENST00000439235 PPP1R2P1Q96PQ5 205 aa21.07■□□□□ 0.96
CHD3-204ENST00000439235 TRIM31Q9BZY9 425 aa21.07■□□□□ 0.96
CHD3-204ENST00000439235 GBA3Q9H227 469 aa21.07■□□□□ 0.96
CHD3-204ENST00000439235 NT5MQ9NPB1 228 aa21.07■□□□□ 0.96
CHD3-204ENST00000439235 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.07■□□□□ 0.96
CHD3-204ENST00000439235 RSPH14Q9UHP6 348 aa21.07■□□□□ 0.96
CHD3-204ENST00000439235 PIAS3Q9Y6X2 628 aa21.07■□□□□ 0.96
CHD3-204ENST00000439235 V9GYY5 206 aaPredicted RBP21.07■□□□□ 0.96
CHD3-204ENST00000439235 ZBTB24O43167 697 aaPredicted RBP21.06■□□□□ 0.96
CHD3-204ENST00000439235 TMCC1O94876 653 aa21.06■□□□□ 0.96
CHD3-204ENST00000439235 KAT7O95251 611 aa21.06■□□□□ 0.96
CHD3-204ENST00000439235 HLA-DQB2P05538 268 aa21.06■□□□□ 0.96
CHD3-204ENST00000439235 GLULP15104 373 aa21.06■□□□□ 0.96
CHD3-204ENST00000439235 CTHP32929 405 aa21.06■□□□□ 0.96
CHD3-204ENST00000439235 SOX9P48436 509 aa21.06■□□□□ 0.96
CHD3-204ENST00000439235 ERCC6LQ2NKX8 1250 aa21.06■□□□□ 0.96
CHD3-204ENST00000439235 PARP6Q2NL67 630 aa21.06■□□□□ 0.96
CHD3-204ENST00000439235 DUPD1Q68J44 220 aa21.06■□□□□ 0.96
CHD3-204ENST00000439235 CNTD1Q8N815 330 aa21.06■□□□□ 0.96
CHD3-204ENST00000439235 ATP11CQ8NB49 1132 aa21.06■□□□□ 0.96
CHD3-204ENST00000439235 BBOF1Q8ND07 529 aa21.06■□□□□ 0.96
CHD3-204ENST00000439235 UCMAQ8WVF2 138 aa21.06■□□□□ 0.96
CHD3-204ENST00000439235 SNF8Q96H20 258 aa21.06■□□□□ 0.96
CHD3-204ENST00000439235 P2RY13Q9BPV8 354 aa21.06■□□□□ 0.96
CHD3-204ENST00000439235 DMGDHQ9UI17 866 aaKnown RBP21.06■□□□□ 0.96
CHD3-204ENST00000439235 HS3ST2Q9Y278 367 aa21.06■□□□□ 0.96
CHD3-204ENST00000439235 ATP8A1Q9Y2Q0 1164 aa21.06■□□□□ 0.96
CHD3-204ENST00000439235 TTLL3Q9Y4R7 772 aa21.06■□□□□ 0.96
CHD3-204ENST00000439235 VCANP13611 3396 aa21.05■□□□□ 0.96
CHD3-204ENST00000439235 COL4A2P08572 1712 aa21.05■□□□□ 0.96
CHD3-204ENST00000439235 TBC1D3BA6NDS4 549 aa21.05■□□□□ 0.96
CHD3-204ENST00000439235 SRPRAP08240 638 aaKnown RBP21.05■□□□□ 0.96
CHD3-204ENST00000439235 DLDP09622 509 aaKnown RBP21.05■□□□□ 0.96
CHD3-204ENST00000439235 NNMTP40261 264 aa21.05■□□□□ 0.96
CHD3-204ENST00000439235 VASPP50552 380 aaPredicted RBP21.05■□□□□ 0.96
CHD3-204ENST00000439235 DRG2P55039 364 aaKnown RBP21.05■□□□□ 0.96
CHD3-204ENST00000439235 PRPSAP1Q14558 356 aa21.05■□□□□ 0.96
CHD3-204ENST00000439235 E2F5Q15329 346 aa21.05■□□□□ 0.96
CHD3-204ENST00000439235 TMEM215Q68D42 235 aa21.05■□□□□ 0.96
CHD3-204ENST00000439235 IFT20Q8IY31 132 aa21.05■□□□□ 0.96
CHD3-204ENST00000439235 GPR161Q8N6U8 529 aaKnown RBP21.05■□□□□ 0.96
CHD3-204ENST00000439235 CHFRQ96EP1 664 aa21.05■□□□□ 0.96
CHD3-204ENST00000439235 PSKH2Q96QS6 385 aa21.05■□□□□ 0.96
CHD3-204ENST00000439235 POLR1EQ9GZS1 481 aaKnown RBP21.05■□□□□ 0.96
CHD3-204ENST00000439235 DPH5Q9H2P9 285 aa21.05■□□□□ 0.96
CHD3-204ENST00000439235 GLOD4Q9HC38 313 aa21.05■□□□□ 0.96
CHD3-204ENST00000439235 EPB41L5Q9HCM4 733 aa21.05■□□□□ 0.96
CHD3-204ENST00000439235 RAB6BQ9NRW1 208 aa21.05■□□□□ 0.96
CHD3-204ENST00000439235 FAM114A2Q9NRY5 505 aa21.05■□□□□ 0.96
CHD3-204ENST00000439235 ELOVL2Q9NXB9 296 aa21.05■□□□□ 0.96
CHD3-204ENST00000439235 DUSP12Q9UNI6 340 aa21.05■□□□□ 0.96
CHD3-204ENST00000439235 SLC8A2Q9UPR5 921 aa21.05■□□□□ 0.96
CHD3-204ENST00000439235 ERVW-1Q9UQF0 538 aa21.05■□□□□ 0.96
CHD3-204ENST00000439235 ACTL7AQ9Y615 435 aa21.05■□□□□ 0.96
CHD3-204ENST00000439235 KIAA1549LQ6ZVL6 1849 aa21.05■□□□□ 0.96
CHD3-204ENST00000439235 GOLGA6CA6NDK9 693 aa21.04■□□□□ 0.96
CHD3-204ENST00000439235 GOLGA6BA6NDN3 693 aa21.04■□□□□ 0.96
CHD3-204ENST00000439235 NARSO43776 548 aaKnown RBP21.04■□□□□ 0.96
CHD3-204ENST00000439235 CD160O95971 181 aa21.04■□□□□ 0.96
CHD3-204ENST00000439235 GOLGA6DP0CG33 693 aa21.04■□□□□ 0.96
CHD3-204ENST00000439235 NFKB1P19838 968 aa21.04■□□□□ 0.96
CHD3-204ENST00000439235 MCM3P25205 808 aa21.04■□□□□ 0.96
CHD3-204ENST00000439235 CTSOP43234 321 aaPredicted RBP21.04■□□□□ 0.96
CHD3-204ENST00000439235 RHOAP61586 193 aa21.04■□□□□ 0.96
CHD3-204ENST00000439235 ST8SIA6P61647 398 aa21.04■□□□□ 0.96
CHD3-204ENST00000439235 BASP1P80723 227 aaKnown RBP21.04■□□□□ 0.96
CHD3-204ENST00000439235 ITKQ08881 620 aa21.04■□□□□ 0.96
CHD3-204ENST00000439235 CALCOCO2Q13137 446 aa21.04■□□□□ 0.96
CHD3-204ENST00000439235 CYTH1Q15438 398 aa21.04■□□□□ 0.96
CHD3-204ENST00000439235 IZUMO3Q5VZ72 239 aa21.04■□□□□ 0.96
CHD3-204ENST00000439235 PCGF5Q86SE9 256 aa21.04■□□□□ 0.96
CHD3-204ENST00000439235 SEC14L1Q92503 715 aa21.04■□□□□ 0.96
CHD3-204ENST00000439235 ZNF419Q96HQ0 510 aaPredicted RBP21.04■□□□□ 0.96
CHD3-204ENST00000439235 FCRL5Q96RD9 977 aa21.04■□□□□ 0.96
CHD3-204ENST00000439235 MGME1Q9BQP7 344 aa21.04■□□□□ 0.96
CHD3-204ENST00000439235 CEP44Q9C0F1 390 aa21.04■□□□□ 0.96
CHD3-204ENST00000439235 ANKZF1Q9H8Y5 726 aa21.04■□□□□ 0.96
CHD3-204ENST00000439235 HEBP1Q9NRV9 189 aa21.04■□□□□ 0.96
CHD3-204ENST00000439235 GOLGA6AQ9NYA3 693 aa21.04■□□□□ 0.96
CHD3-204ENST00000439235 WHRNQ9P202 907 aa21.04■□□□□ 0.96
CHD3-204ENST00000439235 SORCS3Q9UPU3 1222 aa21.04■□□□□ 0.96
CHD3-204ENST00000439235 SNX24Q9Y343 169 aa21.04■□□□□ 0.96
CHD3-204ENST00000439235 C19orf67A6NJJ6 358 aa21.03■□□□□ 0.96
CHD3-204ENST00000439235 PRRT4C9JH25 899 aa21.03■□□□□ 0.96
CHD3-204ENST00000439235 BHMG1C9JSJ3 638 aaPredicted RBP21.03■□□□□ 0.96
CHD3-204ENST00000439235 E7EVH7 732 aa21.03■□□□□ 0.96
CHD3-204ENST00000439235 DNALI1O14645 258 aaPredicted RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms