RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 TMCC1O94876 653 aa17.23■□□□□ 0.35
TARDBP-203ENST00000439080 ZRANB2O95218 330 aaKnown RBP eCLIP17.23■□□□□ 0.355e-13■□□□□ 10.2
TARDBP-203ENST00000439080 MAP3K6O95382 1288 aa17.23■□□□□ 0.35
TARDBP-203ENST00000439080 DYNLT1P63172 113 aa17.23■□□□□ 0.35
TARDBP-203ENST00000439080 GBE1Q04446 702 aa17.23■□□□□ 0.35
TARDBP-203ENST00000439080 TAZQ16635 292 aa17.23■□□□□ 0.35
TARDBP-203ENST00000439080 ZNF776Q68DI1 518 aaPredicted RBP17.23■□□□□ 0.35
TARDBP-203ENST00000439080 METTL3Q86U44 580 aaKnown RBP17.23■□□□□ 0.35
TARDBP-203ENST00000439080 STK40Q8N2I9 435 aa17.23■□□□□ 0.35
TARDBP-203ENST00000439080 PCDH20Q8N6Y1 951 aaKnown RBP17.23■□□□□ 0.35
TARDBP-203ENST00000439080 PLD5Q8N7P1 536 aa17.23■□□□□ 0.35
TARDBP-203ENST00000439080 ALG3Q92685 438 aa17.23■□□□□ 0.35
TARDBP-203ENST00000439080 PRCCQ92733 491 aaPredicted RBP17.23■□□□□ 0.35
TARDBP-203ENST00000439080 CCDC114Q96M63 670 aa17.23■□□□□ 0.35
TARDBP-203ENST00000439080 MAK16Q9BXY0 300 aaKnown RBP17.23■□□□□ 0.35
TARDBP-203ENST00000439080 TM6SF2Q9BZW4 377 aa17.23■□□□□ 0.35
TARDBP-203ENST00000439080 RSPH9Q9H1X1 276 aaPredicted RBP17.23■□□□□ 0.35
TARDBP-203ENST00000439080 CD93Q9NPY3 652 aa17.23■□□□□ 0.35
TARDBP-203ENST00000439080 IPO11Q9UI26 975 aaKnown RBP17.23■□□□□ 0.35
TARDBP-203ENST00000439080 TNRC6BQ9UPQ9 1833 aaKnown RBP17.23■□□□□ 0.35
TARDBP-203ENST00000439080 hCG_1818297A0A087WSY0 165 aa17.22■□□□□ 0.35
TARDBP-203ENST00000439080 MIF4GDA9UHW6 222 aaKnown RBP17.22■□□□□ 0.35
TARDBP-203ENST00000439080 LILRB5O75023 590 aa17.22■□□□□ 0.35
TARDBP-203ENST00000439080 KRT10P13645 584 aa17.22■□□□□ 0.35
TARDBP-203ENST00000439080 PSMD8P48556 350 aa17.22■□□□□ 0.35
TARDBP-203ENST00000439080 PEX5P50542 639 aa17.22■□□□□ 0.35
TARDBP-203ENST00000439080 DNA2P51530 1060 aa17.22■□□□□ 0.35
TARDBP-203ENST00000439080 RWDD2BP57060 319 aa17.22■□□□□ 0.35
TARDBP-203ENST00000439080 RPS14P62263 151 aaKnown RBP17.22■□□□□ 0.35
TARDBP-203ENST00000439080 IL10RBQ08334 325 aa17.22■□□□□ 0.35
TARDBP-203ENST00000439080 GALNT2Q10471 571 aa17.22■□□□□ 0.35
TARDBP-203ENST00000439080 SRSF5Q13243 272 aaKnown RBP17.22■□□□□ 0.35
TARDBP-203ENST00000439080 LLGL1Q15334 1064 aa17.22■□□□□ 0.35
TARDBP-203ENST00000439080 PPP2R5EQ16537 467 aa17.22■□□□□ 0.35
TARDBP-203ENST00000439080 TFDP3Q5H9I0 405 aa17.22■□□□□ 0.35
TARDBP-203ENST00000439080 KAZNQ674X7 775 aa17.22■□□□□ 0.35
TARDBP-203ENST00000439080 RCOR2Q8IZ40 523 aa17.22■□□□□ 0.35
TARDBP-203ENST00000439080 UBL4BQ8N7F7 174 aa17.22■□□□□ 0.35
TARDBP-203ENST00000439080 OR2A12Q8NGT7 310 aa17.22■□□□□ 0.35
TARDBP-203ENST00000439080 CASKIN2Q8WXE0 1202 aa17.22■□□□□ 0.35
TARDBP-203ENST00000439080 OR8D1Q8WZ84 308 aa17.22■□□□□ 0.35
TARDBP-203ENST00000439080 SIPA1Q96FS4 1042 aa17.22■□□□□ 0.35
TARDBP-203ENST00000439080 THADAQ6YHU6 1953 aa17.21■□□□□ 0.35
TARDBP-203ENST00000439080 ALOX15BO15296 676 aa17.21■□□□□ 0.35
TARDBP-203ENST00000439080 RNASEH1O60930 286 aaKnown RBP17.21■□□□□ 0.35
TARDBP-203ENST00000439080 ZFXP17010 805 aaPredicted RBP17.21■□□□□ 0.35
TARDBP-203ENST00000439080 GARSP41250 739 aaKnown RBP17.21■□□□□ 0.35
TARDBP-203ENST00000439080 RECQLP46063 649 aaPredicted RBP17.21■□□□□ 0.35
TARDBP-203ENST00000439080 INO80DQ53TQ3 878 aaPredicted RBP17.21■□□□□ 0.35
TARDBP-203ENST00000439080 MMAAQ8IVH4 418 aaKnown RBP17.21■□□□□ 0.35
TARDBP-203ENST00000439080 GAB3Q8WWW8 586 aa17.21■□□□□ 0.35
TARDBP-203ENST00000439080 ISG20Q96AZ6 181 aaKnown RBP17.21■□□□□ 0.35
TARDBP-203ENST00000439080 HES6Q96HZ4 224 aa17.21■□□□□ 0.35
TARDBP-203ENST00000439080 SPACA7Q96KW9 195 aa17.21■□□□□ 0.35
TARDBP-203ENST00000439080 DTLQ9NZJ0 730 aa17.21■□□□□ 0.35
TARDBP-203ENST00000439080 HEY1Q9Y5J3 304 aa17.21■□□□□ 0.35
TARDBP-203ENST00000439080 MCF2LO15068 1137 aa17.2■□□□□ 0.34
TARDBP-203ENST00000439080 DDX3YO15523 660 aaKnown RBP17.2■□□□□ 0.34
TARDBP-203ENST00000439080 ZSCAN12O43309 604 aa17.2■□□□□ 0.34
TARDBP-203ENST00000439080 MAFKO60675 156 aa17.2■□□□□ 0.34
TARDBP-203ENST00000439080 RPP40O75818 363 aaKnown RBP17.2■□□□□ 0.34
TARDBP-203ENST00000439080 GSRP00390 522 aa17.2■□□□□ 0.34
TARDBP-203ENST00000439080 DNTTP04053 509 aa17.2■□□□□ 0.34
TARDBP-203ENST00000439080 C7P10643 843 aa17.2■□□□□ 0.34
TARDBP-203ENST00000439080 ACADMP11310 421 aa17.2■□□□□ 0.34
TARDBP-203ENST00000439080 CCNHP51946 323 aaPredicted RBP17.2■□□□□ 0.34
TARDBP-203ENST00000439080 COPS2P61201 443 aa17.2■□□□□ 0.34
TARDBP-203ENST00000439080 RHOAP61586 193 aa17.2■□□□□ 0.34
TARDBP-203ENST00000439080 TFDP2Q14188 446 aa17.2■□□□□ 0.34
TARDBP-203ENST00000439080 CST6Q15828 149 aa17.2■□□□□ 0.34
TARDBP-203ENST00000439080 TTC31Q49AM3 519 aaPredicted RBP17.2■□□□□ 0.34
TARDBP-203ENST00000439080 USP39Q53GS9 565 aaKnown RBP17.2■□□□□ 0.34
TARDBP-203ENST00000439080 TMCO4Q5TGY1 634 aa17.2■□□□□ 0.34
TARDBP-203ENST00000439080 NPNTQ6UXI9 565 aa17.2■□□□□ 0.34
TARDBP-203ENST00000439080 DPY19L3Q6ZPD9 716 aa17.2■□□□□ 0.34
TARDBP-203ENST00000439080 DSG4Q86SJ6 1040 aa17.2■□□□□ 0.34
TARDBP-203ENST00000439080 CHST14Q8NCH0 376 aa17.2■□□□□ 0.34
TARDBP-203ENST00000439080 TRIM58Q8NG06 486 aa17.2■□□□□ 0.34
TARDBP-203ENST00000439080 GRIN3AQ8TCU5 1115 aa17.2■□□□□ 0.34
TARDBP-203ENST00000439080 RLN3Q8WXF3 142 aa17.2■□□□□ 0.34
TARDBP-203ENST00000439080 EXOC2Q96KP1 924 aa17.2■□□□□ 0.34
TARDBP-203ENST00000439080 FAM129BQ96TA1 746 aa17.2■□□□□ 0.34
TARDBP-203ENST00000439080 USP36Q9P275 1121 aaKnown RBP17.2■□□□□ 0.34
TARDBP-203ENST00000439080 LHX3Q9UBR4 397 aa17.2■□□□□ 0.34
TARDBP-203ENST00000439080 CYP8B1Q9UNU6 501 aa17.2■□□□□ 0.34
TARDBP-203ENST00000439080 MID1O15344 667 aa17.19■□□□□ 0.34
TARDBP-203ENST00000439080 CST8O60676 142 aa17.19■□□□□ 0.34
TARDBP-203ENST00000439080 ZNF217O75362 1048 aa17.19■□□□□ 0.34
TARDBP-203ENST00000439080 IGSF6O95976 241 aa17.19■□□□□ 0.34
TARDBP-203ENST00000439080 ADH1BP00325 375 aa17.19■□□□□ 0.34
TARDBP-203ENST00000439080 IL1BP01584 269 aa17.19■□□□□ 0.34
TARDBP-203ENST00000439080 CTSLP07711 333 aa17.19■□□□□ 0.34
TARDBP-203ENST00000439080 MX2P20592 715 aa17.19■□□□□ 0.34
TARDBP-203ENST00000439080 CNR2P34972 360 aa17.19■□□□□ 0.34
TARDBP-203ENST00000439080 PTPN7P35236 360 aa17.19■□□□□ 0.34
TARDBP-203ENST00000439080 P2RY2P41231 377 aa17.19■□□□□ 0.34
TARDBP-203ENST00000439080 TPMTP51580 245 aa17.19■□□□□ 0.34
TARDBP-203ENST00000439080 ZBTB16Q05516 673 aa17.19■□□□□ 0.34
TARDBP-203ENST00000439080 ADCY2Q08462 1091 aa17.19■□□□□ 0.34
TARDBP-203ENST00000439080 SLC10A2Q12908 348 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms