RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 FAM35AQ86V20 835 aa13.59□□□□□ -0.23
ACTN1-204ENST00000438964 NT5DC4Q86YG4 428 aa13.59□□□□□ -0.23
ACTN1-204ENST00000438964 BPIFB6Q8NFQ5 453 aa13.59□□□□□ -0.23
ACTN1-204ENST00000438964 TBC1D15Q8TC07 691 aa13.59□□□□□ -0.23
ACTN1-204ENST00000438964 IRGQQ8WZA9 623 aa13.59□□□□□ -0.23
ACTN1-204ENST00000438964 ZNF597Q96LX8 424 aa13.59□□□□□ -0.23
ACTN1-204ENST00000438964 ZBTB26Q9HCK0 441 aa13.59□□□□□ -0.23
ACTN1-204ENST00000438964 ZNF70Q9UC06 446 aaPredicted RBP13.59□□□□□ -0.23
ACTN1-204ENST00000438964 RUVBL2Q9Y230 463 aaKnown RBP13.59□□□□□ -0.23
ACTN1-204ENST00000438964 HTR3EA5X5Y0 456 aa13.59□□□□□ -0.23
ACTN1-204ENST00000438964 MAN1A2O60476 641 aa13.59□□□□□ -0.23
ACTN1-204ENST00000438964 ATP5BP06576 529 aaKnown RBP13.59□□□□□ -0.23
ACTN1-204ENST00000438964 CHRM3P20309 590 aa13.59□□□□□ -0.23
ACTN1-204ENST00000438964 CCND2P30279 289 aa13.59□□□□□ -0.23
ACTN1-204ENST00000438964 NAMPTP43490 491 aa13.59□□□□□ -0.23
ACTN1-204ENST00000438964 MLLT10P55197 1068 aa13.59□□□□□ -0.23
ACTN1-204ENST00000438964 GOLGA7BQ2TAP0 167 aa13.59□□□□□ -0.23
ACTN1-204ENST00000438964 ZIK1Q3SY52 487 aaPredicted RBP13.59□□□□□ -0.23
ACTN1-204ENST00000438964 MCUQ8NE86 351 aa13.59□□□□□ -0.23
ACTN1-204ENST00000438964 SLC38A10Q9HBR0 1119 aa13.59□□□□□ -0.23
ACTN1-204ENST00000438964 AHDC1Q5TGY3 1603 aaPredicted RBP13.59□□□□□ -0.23
ACTN1-204ENST00000438964 CITO14578 2027 aa13.59□□□□□ -0.23
ACTN1-204ENST00000438964 CES1P23141 567 aa13.58□□□□□ -0.23
ACTN1-204ENST00000438964 NUMBP49757 651 aa13.58□□□□□ -0.23
ACTN1-204ENST00000438964 SLC7A2P52569 658 aa13.58□□□□□ -0.23
ACTN1-204ENST00000438964 MTA1Q13330 715 aa13.58□□□□□ -0.23
ACTN1-204ENST00000438964 TRIM25Q14258 630 aaKnown RBP13.58□□□□□ -0.23
ACTN1-204ENST00000438964 GRM3Q14832 879 aa13.58□□□□□ -0.23
ACTN1-204ENST00000438964 USP41Q3LFD5 358 aa13.58□□□□□ -0.23
ACTN1-204ENST00000438964 PRR23BQ6ZRT6 265 aa13.58□□□□□ -0.23
ACTN1-204ENST00000438964 SPPL2CQ8IUH8 684 aa13.58□□□□□ -0.23
ACTN1-204ENST00000438964 CDKL3Q8IVW4 592 aaPredicted RBP13.58□□□□□ -0.23
ACTN1-204ENST00000438964 DQX1Q8TE96 717 aaKnown RBP13.58□□□□□ -0.23
ACTN1-204ENST00000438964 LRRC39Q96DD0 335 aa13.58□□□□□ -0.23
ACTN1-204ENST00000438964 KCTD15Q96SI1 283 aaPredicted RBP13.58□□□□□ -0.23
ACTN1-204ENST00000438964 RPAP3Q9H6T3 665 aaPredicted RBP13.58□□□□□ -0.23
ACTN1-204ENST00000438964 ZNF638Q14966 1978 aaKnown RBP13.58□□□□□ -0.24
ACTN1-204ENST00000438964 PRKCBP05771 671 aa13.58□□□□□ -0.24
ACTN1-204ENST00000438964 YWHAQP27348 245 aa13.58□□□□□ -0.24
ACTN1-204ENST00000438964 RPL26P61254 145 aaKnown RBP13.58□□□□□ -0.24
ACTN1-204ENST00000438964 TXNL4AP83876 142 aaKnown RBP13.58□□□□□ -0.24
ACTN1-204ENST00000438964 PIGFQ07326 219 aa13.58□□□□□ -0.24
ACTN1-204ENST00000438964 CAPRIN1Q14444 709 aaKnown RBP13.58□□□□□ -0.24
ACTN1-204ENST00000438964 PPP1R26Q5T8A7 1209 aaPredicted RBP13.58□□□□□ -0.24
ACTN1-204ENST00000438964 OLFML1Q6UWY5 402 aa13.58□□□□□ -0.24
ACTN1-204ENST00000438964 PIWIL3Q7Z3Z3 882 aaKnown RBP13.58□□□□□ -0.24
ACTN1-204ENST00000438964 SLC41A1Q8IVJ1 513 aa13.58□□□□□ -0.24
ACTN1-204ENST00000438964 P2RY11Q96G91 374 aa13.58□□□□□ -0.24
ACTN1-204ENST00000438964 ANKRD36BP1Q96IX9 119 aa13.58□□□□□ -0.24
ACTN1-204ENST00000438964 MAML3Q96JK9 1138 aa13.58□□□□□ -0.24
ACTN1-204ENST00000438964 CXCL16Q9H2A7 254 aa13.58□□□□□ -0.24
ACTN1-204ENST00000438964 LTB4R2Q9NPC1 389 aa13.58□□□□□ -0.24
ACTN1-204ENST00000438964 GGA3Q9NZ52 723 aa13.58□□□□□ -0.24
ACTN1-204ENST00000438964 IGSF9Q9P2J2 1179 aa13.58□□□□□ -0.24
ACTN1-204ENST00000438964 A6NL46 340 aa13.58□□□□□ -0.24
ACTN1-204ENST00000438964 TRIM38O00635 465 aa13.58□□□□□ -0.24
ACTN1-204ENST00000438964 RGL2O15211 777 aa13.58□□□□□ -0.24
ACTN1-204ENST00000438964 MSCO60682 206 aa13.58□□□□□ -0.24
ACTN1-204ENST00000438964 SBK3P0C264 359 aa13.58□□□□□ -0.24
ACTN1-204ENST00000438964 ZNF24P17028 368 aa13.58□□□□□ -0.24
ACTN1-204ENST00000438964 PGAM1P18669 254 aa13.58□□□□□ -0.24
ACTN1-204ENST00000438964 ATP6V1B2P21281 511 aa13.58□□□□□ -0.24
ACTN1-204ENST00000438964 TGM2P21980 687 aa13.58□□□□□ -0.24
ACTN1-204ENST00000438964 PRDX6P30041 224 aa13.58□□□□□ -0.24
ACTN1-204ENST00000438964 HMOX2P30519 316 aa13.58□□□□□ -0.24
ACTN1-204ENST00000438964 GJA9P57773 515 aa13.58□□□□□ -0.24
ACTN1-204ENST00000438964 POU5F1BQ06416 359 aa13.58□□□□□ -0.24
ACTN1-204ENST00000438964 MAP7D1Q3KQU3 841 aa13.58□□□□□ -0.24
ACTN1-204ENST00000438964 PRAMEF18Q5VWM3 479 aa13.58□□□□□ -0.24
ACTN1-204ENST00000438964 LSMEM2Q8N112 164 aa13.58□□□□□ -0.24
ACTN1-204ENST00000438964 HMGCLL1Q8TB92 370 aa13.58□□□□□ -0.24
ACTN1-204ENST00000438964 CNDP1Q96KN2 507 aa13.58□□□□□ -0.24
ACTN1-204ENST00000438964 CSPG4P5Q96PW8 444 aa13.58□□□□□ -0.24
ACTN1-204ENST00000438964 XPR1Q9UBH6 696 aa13.58□□□□□ -0.24
ACTN1-204ENST00000438964 SLC27A5Q9Y2P5 690 aa13.58□□□□□ -0.24
ACTN1-204ENST00000438964 PTGDR2Q9Y5Y4 395 aa13.58□□□□□ -0.24
ACTN1-204ENST00000438964 WDR81Q562E7 1941 aa13.58□□□□□ -0.24
ACTN1-204ENST00000438964 POLBP06746 335 aa13.57□□□□□ -0.24
ACTN1-204ENST00000438964 SUPT20HL2P0C7V6 817 aa13.57□□□□□ -0.24
ACTN1-204ENST00000438964 CDH3P22223 829 aa13.57□□□□□ -0.24
ACTN1-204ENST00000438964 HSPA13P48723 471 aa13.57□□□□□ -0.24
ACTN1-204ENST00000438964 PHEXP78562 749 aa13.57□□□□□ -0.24
ACTN1-204ENST00000438964 CNTN2Q02246 1040 aa13.57□□□□□ -0.24
ACTN1-204ENST00000438964 TNK2Q07912 1038 aa13.57□□□□□ -0.24
ACTN1-204ENST00000438964 USP10Q14694 798 aaKnown RBP13.57□□□□□ -0.24
ACTN1-204ENST00000438964 SUPT20HL1Q3ZLR7 823 aa13.57□□□□□ -0.24
ACTN1-204ENST00000438964 NHSL2Q5HYW2 709 aa13.57□□□□□ -0.24
ACTN1-204ENST00000438964 JADE1Q6IE81 842 aa13.57□□□□□ -0.24
ACTN1-204ENST00000438964 KCTD8Q6ZWB6 473 aa13.57□□□□□ -0.24
ACTN1-204ENST00000438964 RTP4Q96DX8 246 aa13.57□□□□□ -0.24
ACTN1-204ENST00000438964 MPHOSPH6Q99547 160 aaKnown RBP13.57□□□□□ -0.24
ACTN1-204ENST00000438964 RBBP8Q99708 897 aa13.57□□□□□ -0.24
ACTN1-204ENST00000438964 LHX5Q9H2C1 402 aa13.57□□□□□ -0.24
ACTN1-204ENST00000438964 MINDY3Q9H8M7 445 aa13.57□□□□□ -0.24
ACTN1-204ENST00000438964 OXSMQ9NWU1 459 aa13.57□□□□□ -0.24
ACTN1-204ENST00000438964 BTAF1O14981 1849 aa13.57□□□□□ -0.24
ACTN1-204ENST00000438964 MGAMO43451 1857 aa13.57□□□□□ -0.24
ACTN1-204ENST00000438964 KPNA7A9QM74 516 aa13.57□□□□□ -0.24
ACTN1-204ENST00000438964 LSM1O15116 133 aaKnown RBP13.57□□□□□ -0.24
ACTN1-204ENST00000438964 OGTO15294 1046 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms