RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 TBC1D3KA0A087X1G2 549 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 CCDC189A1A4V9 331 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 TBC1D3BA6NDS4 549 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 TBC1D3FA6NER0 549 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 AGAP5A6NIR3 686 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 FAM90A8PA6NJQ4 464 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 TBC1D3LB9A6J9 549 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 E7EVH7 732 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 IRAK2O43187 625 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 FAM90A13PP0C7W8 464 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 FAM90A24PP0C7X0 464 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 TBC1D3HP0C7X1 549 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 HOXB6P17509 224 aaKnown RBP3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 SCP2P22307 547 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 SERPINA4P29622 427 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 MAPK9P45984 424 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 POLD2P49005 469 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 RPL15P61313 204 aaKnown RBP3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 INPP5JQ15735 1006 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 SLC15A2Q16348 729 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 GALNTL6Q49A17 601 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 LRRC24Q50LG9 513 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 TBC1D3GQ6DHY5 549 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 TBC1D3CQ6IPX1 549 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 SMAP1Q8IYB5 467 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 TBC1D3Q8IZP1 549 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 CPT1BQ92523 772 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 ATP2A3Q93084 1043 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 SLC25A28Q96A46 364 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 GCC1Q96CN9 775 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 ISCA1Q9BUE6 129 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 CHODLQ9H9P2 273 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 SAYSD1Q9NPB0 183 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 SPAG4Q9NPE6 437 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 FZD3Q9NPG1 666 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 LIN7CQ9NUP9 197 aaKnown RBP3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 RRN3Q9NYV6 651 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 IPO11Q9UI26 975 aaKnown RBP3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 FEM1BQ9UK73 627 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 NFU1Q9UMS0 254 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 C19orf53Q9UNZ5 99 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 LAMP3Q9UQV4 416 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 PCDHA10Q9Y5I2 948 aa3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 CHD2O14647 1828 aaKnown RBP3.67□□□□□ -1.82
HMGB3P12-201ENST00000438745 CASZ1Q86V15 1759 aa3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 LRPPRCP42704 1394 aaKnown RBP3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 TMEM272A0A1B0GTI8 110 aa3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 C3orf70A6NLC5 250 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 SLC38A8A6NNN8 435 aa3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 EFCAB8A8MWE9 144 aa3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 SPTLC2O15270 562 aa3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 SMAD6O43541 496 aaKnown RBP3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 IFNA2P01563 188 aa3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 HOXB2P14652 356 aa3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 CST5P28325 142 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 TKTP29401 623 aaKnown RBP3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 GRK5P34947 590 aa3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 ADD2P35612 726 aa3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 AARSP49588 968 aaKnown RBP eCLIP3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 CDK7P50613 346 aa3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 RBM5P52756 815 aaKnown RBP eCLIP3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 LBX1P52954 281 aa3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 ARL4CP56559 192 aa3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 SHC2P98077 582 aa3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 PPFIA1Q13136 1202 aa3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 TMEM95Q3KNT9 176 aa3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 ADCK5Q3MIX3 580 aa3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 TTC22Q5TAA0 569 aa3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 DAB2IPQ5VWQ8 1189 aa3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 TMEM88Q6PEY1 159 aa3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 RFX8Q6ZV50 586 aa3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 MEPCEQ7L2J0 689 aaKnown RBP3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 C2CD5Q86YS7 1000 aa3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 ADPRHL1Q8NDY3 354 aa3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 OR6Y1Q8NGX8 325 aa3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 PPM1EQ8WY54 764 aa3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 ZSCAN31Q96LW9 406 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 NLRP4Q96MN2 994 aa3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 NPAS1Q99742 590 aa3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 ABHD14AQ9BUJ0 271 aa3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 ZNF580Q9UK33 172 aa3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 UTS2RQ9UKP6 389 aa3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 RIMS2Q9UQ26 1411 aa3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 MARF1Q9Y4F3 1742 aaKnown RBP3.66□□□□□ -1.82
HMGB3P12-201ENST00000438745 TRPM2O94759 1503 aa3.65□□□□□ -1.82
HMGB3P12-201ENST00000438745 NEXMIFQ5QGS0 1516 aa3.65□□□□□ -1.82
HMGB3P12-201ENST00000438745 EHBP1L1Q8N3D4 1523 aa3.65□□□□□ -1.82
HMGB3P12-201ENST00000438745 MTUS2Q5JR59 1369 aa3.65□□□□□ -1.82
HMGB3P12-201ENST00000438745 CCNB3Q8WWL7 1395 aa3.65□□□□□ -1.82
HMGB3P12-201ENST00000438745 A6NNC1 897 aa3.65□□□□□ -1.83
HMGB3P12-201ENST00000438745 KCNJ18B7U540 433 aa3.65□□□□□ -1.83
HMGB3P12-201ENST00000438745 EIF3FO00303 357 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P12-201ENST00000438745 HEXIM1O94992 359 aaKnown RBP3.65□□□□□ -1.83
HMGB3P12-201ENST00000438745 LARGE1O95461 756 aa3.65□□□□□ -1.83
HMGB3P12-201ENST00000438745 CYP21A2P08686 494 aa3.65□□□□□ -1.83
HMGB3P12-201ENST00000438745 CNTFP26441 200 aa3.65□□□□□ -1.83
HMGB3P12-201ENST00000438745 CCT5P48643 541 aa3.65□□□□□ -1.83
HMGB3P12-201ENST00000438745 ADPRHP54922 357 aa3.65□□□□□ -1.83
HMGB3P12-201ENST00000438745 TAS2R50P59544 299 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms