RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 FCRL3Q96P31 734 aaPredicted RBP14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 TRIM62Q9BVG3 475 aa14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 LRCH1Q9Y2L9 728 aa14.14□□□□□ -0.15
PTCHD3-201ENST00000438700 CCDC22O60826 627 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 CNTFP26441 200 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 ABCG1P45844 678 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 RPS6KA3P51812 740 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 ELAVL2Q12926 359 aaKnown RBP14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 ARL13BQ3SXY8 428 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 FASTKD1Q53R41 847 aaKnown RBP14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 CMPK2Q5EBM0 449 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 SPDYAQ5MJ70 313 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 BTBD8Q5XKL5 378 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 CNKSR3Q6P9H4 555 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 RSPO2Q6UXX9 243 aaPredicted RBP14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 CYS1Q717R9 158 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 SCD5Q86SK9 330 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 TRIM42Q8IWZ5 723 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 GPR152Q8TDT2 470 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 ZNF669Q96BR6 464 aaPredicted RBP14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 CERS2Q96G23 380 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 EMCNQ9ULC0 261 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 VANGL2Q9ULK5 521 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 CCDC78A2IDD5 438 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 ATP9BO43861 1147 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 LYPLA1O75608 230 aaPredicted RBP14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 SOAT2O75908 522 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 LRIG2O94898 1065 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 IL1BP01584 269 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 CLTBP09497 229 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 SRGAP2BP0DMP2 458 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 AQP5P55064 265 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 SLC34A1Q06495 639 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 PPIDQ08752 370 aaKnown RBP14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 TIFABQ6ZNK6 161 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 PDZD4Q76G19 769 aaPredicted RBP14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 CMC1Q7Z7K0 106 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 MFN1Q8IWA4 741 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 SHKBP1Q8TBC3 707 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 AZIN2Q96A70 460 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 CLPTM1LQ96KA5 538 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 C8orf48Q96LL4 319 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 PRDM16Q9HAZ2 1276 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 NMUR1Q9HB89 426 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 ABCC13Q9NSE7 274 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 PCDH10Q9P2E7 1040 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 SCOCQ9UIL1 159 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 NUDT5Q9UKK9 219 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 PLXNA3P51805 1871 aa14.13□□□□□ -0.15
PTCHD3-201ENST00000438700 A0A1W2PQH9 124 aa14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 DNAJC6O75061 913 aa14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 RTN3O95197 1032 aaPredicted RBP14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 GSRP00390 522 aa14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 CD68P34810 354 aaPredicted RBP14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 STX3Q13277 289 aa14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 FBXO46Q6PJ61 603 aaPredicted RBP14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 PRSS55Q6UWB4 352 aaPredicted RBP14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 BEND5Q7L4P6 421 aa14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 CRLF3Q8IUI8 442 aa14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 NUP93Q8N1F7 819 aa14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 MCUR1Q96AQ8 359 aa14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 MFSD3Q96ES6 412 aa14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 NSL1Q96IY1 281 aa14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 PAWRQ96IZ0 340 aaKnown RBP14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 AGAP2Q99490 1192 aa14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 TTPALQ9BTX7 342 aa14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 SIK2Q9H0K1 926 aa14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 ZNF358Q9NW07 568 aa14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 PPARGC1AQ9UBK2 798 aaKnown RBP14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 SLC27A5Q9Y2P5 690 aa14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 ITM2AO43736 263 aa14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 AP2A1O95782 977 aa14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 IGLV3-25P01717 112 aa14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 TPH1P17752 444 aa14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 NFKB1P19838 968 aa14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 TYK2P29597 1187 aa14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 GARSP41250 739 aaKnown RBP14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 MAGEA11P43364 429 aa14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 ALDH7A1P49419 539 aaKnown RBP14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 USP46P62068 366 aa14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 LRRC26Q2I0M4 334 aa14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 CERCAMQ5T4B2 595 aa14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 RWDD4Q6NW29 188 aaKnown RBP14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 RNF19BQ6ZMZ0 732 aa14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 TMCO2Q7Z6W1 182 aaPredicted RBP14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 GATA6Q92908 595 aa14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 EPAS1Q99814 870 aa14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 NAT9Q9BTE0 207 aa14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 VCXQ9H320 206 aa14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 KCNK4Q9NYG8 393 aa14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 SFMBT1Q9UHJ3 866 aa14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 HBS1LQ9Y450 684 aaKnown RBP14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 COL4A6Q14031 1691 aa14.12□□□□□ -0.15
PTCHD3-201ENST00000438700 MTMR11A4FU01 709 aa14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 GOLGA8TH3BQL2 631 aa14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 IRAK2O43187 625 aa14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 MSI1O43347 362 aaKnown RBP14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 TBC1D4O60343 1298 aa14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 SNNO75324 88 aaPredicted RBP14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 ESRRAP11474 423 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms