RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 PARP15Q460N3 678 aa26.12■■□□□ 1.77
CPNE1-216ENST00000437340 DENND5AQ6IQ26 1287 aa26.12■■□□□ 1.77
CPNE1-216ENST00000437340 KIAA1841Q6NSI8 718 aa26.12■■□□□ 1.77
CPNE1-216ENST00000437340 ARMC2Q8NEN0 867 aa26.12■■□□□ 1.77
CPNE1-216ENST00000437340 C10orf82Q8WW14 230 aa26.12■■□□□ 1.77
CPNE1-216ENST00000437340 MRM3Q9HC36 420 aaKnown RBP26.12■■□□□ 1.77
CPNE1-216ENST00000437340 ALG13Q9NP73 1137 aaKnown RBP26.12■■□□□ 1.77
CPNE1-216ENST00000437340 SIRPGQ9P1W8 387 aa26.12■■□□□ 1.77
CPNE1-216ENST00000437340 DCDC2Q9UHG0 476 aa26.12■■□□□ 1.77
CPNE1-216ENST00000437340 DNMT3LQ9UJW3 386 aa26.12■■□□□ 1.77
CPNE1-216ENST00000437340 MAGED2Q9UNF1 606 aaPredicted RBP26.12■■□□□ 1.77
CPNE1-216ENST00000437340 H0YHG0 523 aa26.12■■□□□ 1.77
CPNE1-216ENST00000437340 SOD2P04179 222 aa26.12■■□□□ 1.77
CPNE1-216ENST00000437340 LIMK2P53671 638 aa26.12■■□□□ 1.77
CPNE1-216ENST00000437340 YBEYP58557 167 aaPredicted RBP26.12■■□□□ 1.77
CPNE1-216ENST00000437340 ATG16L1Q676U5 607 aa26.12■■□□□ 1.77
CPNE1-216ENST00000437340 PDPK2PQ6A1A2 396 aa26.12■■□□□ 1.77
CPNE1-216ENST00000437340 PKN3Q6P5Z2 889 aa26.12■■□□□ 1.77
CPNE1-216ENST00000437340 KLHDC10Q6PID8 442 aa26.12■■□□□ 1.77
CPNE1-216ENST00000437340 FITM2Q8N6M3 262 aa26.12■■□□□ 1.77
CPNE1-216ENST00000437340 RPRD1AQ96P16 312 aaPredicted RBP26.12■■□□□ 1.77
CPNE1-216ENST00000437340 FICDQ9BVA6 458 aa26.12■■□□□ 1.77
CPNE1-216ENST00000437340 UBOX5O94941 541 aa26.11■■□□□ 1.77
CPNE1-216ENST00000437340 HMBSP08397 361 aa26.11■■□□□ 1.77
CPNE1-216ENST00000437340 BGNP21810 368 aa26.11■■□□□ 1.77
CPNE1-216ENST00000437340 MAGEA12P43365 314 aa26.11■■□□□ 1.77
CPNE1-216ENST00000437340 DEFB103AP81534 67 aa26.11■■□□□ 1.77
CPNE1-216ENST00000437340 C5orf22Q49AR2 442 aa26.11■■□□□ 1.77
CPNE1-216ENST00000437340 TPGS2Q68CL5 300 aa26.11■■□□□ 1.77
CPNE1-216ENST00000437340 RANBP10Q6VN20 620 aa26.11■■□□□ 1.77
CPNE1-216ENST00000437340 STRA8Q7Z7C7 330 aa26.11■■□□□ 1.77
CPNE1-216ENST00000437340 TEX26Q8N6G2 289 aa26.11■■□□□ 1.77
CPNE1-216ENST00000437340 NSMCE1Q8WV22 266 aa26.11■■□□□ 1.77
CPNE1-216ENST00000437340 FSD1LQ9BXM9 530 aa26.11■■□□□ 1.77
CPNE1-216ENST00000437340 SP110Q9HB58 689 aa26.11■■□□□ 1.77
CPNE1-216ENST00000437340 VPS45Q9NRW7 570 aa26.11■■□□□ 1.77
CPNE1-216ENST00000437340 C20orf96Q9NUD7 363 aaPredicted RBP26.11■■□□□ 1.77
CPNE1-216ENST00000437340 IL1RAPL1Q9NZN1 696 aa26.11■■□□□ 1.77
CPNE1-216ENST00000437340 RAMP2O60895 175 aa26.1■■□□□ 1.77
CPNE1-216ENST00000437340 DCTN3O75935 186 aa26.1■■□□□ 1.77
CPNE1-216ENST00000437340 ABLIM3O94929 683 aa26.1■■□□□ 1.77
CPNE1-216ENST00000437340 TACR2P21452 398 aa26.1■■□□□ 1.77
CPNE1-216ENST00000437340 BNIP1Q12981 228 aa26.1■■□□□ 1.77
CPNE1-216ENST00000437340 PDE1CQ14123 709 aaPredicted RBP26.1■■□□□ 1.77
CPNE1-216ENST00000437340 HSP90AA5PQ58FG0 334 aa26.1■■□□□ 1.77
CPNE1-216ENST00000437340 MARC1Q5VT66 337 aa26.1■■□□□ 1.77
CPNE1-216ENST00000437340 TMCO2Q7Z6W1 182 aaPredicted RBP26.1■■□□□ 1.77
CPNE1-216ENST00000437340 ZNF461Q8TAF7 563 aa26.1■■□□□ 1.77
CPNE1-216ENST00000437340 TOP1MTQ969P6 601 aa26.1■■□□□ 1.77
CPNE1-216ENST00000437340 IMP4Q96G21 291 aaKnown RBP26.1■■□□□ 1.77
CPNE1-216ENST00000437340 MRGPRX2Q96LB1 330 aa26.1■■□□□ 1.77
CPNE1-216ENST00000437340 CLSTN3Q9BQT9 956 aa26.1■■□□□ 1.77
CPNE1-216ENST00000437340 C2CD2LO14523 706 aa26.1■■□□□ 1.77
CPNE1-216ENST00000437340 RPL17P18621 184 aaKnown RBP26.1■■□□□ 1.77
CPNE1-216ENST00000437340 NMBRP28336 390 aa26.1■■□□□ 1.77
CPNE1-216ENST00000437340 WDR5P61964 334 aaKnown RBP26.1■■□□□ 1.77
CPNE1-216ENST00000437340 IL10RBQ08334 325 aa26.1■■□□□ 1.77
CPNE1-216ENST00000437340 SETDB1Q15047 1291 aa26.1■■□□□ 1.77
CPNE1-216ENST00000437340 FAM133BQ5BKY9 247 aaKnown RBP26.1■■□□□ 1.77
CPNE1-216ENST00000437340 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP26.1■■□□□ 1.77
CPNE1-216ENST00000437340 PPHLN1Q8NEY8 458 aaKnown RBP26.1■■□□□ 1.77
CPNE1-216ENST00000437340 TRIM55Q9BYV6 548 aa26.1■■□□□ 1.77
CPNE1-216ENST00000437340 ARNT2Q9HBZ2 717 aa26.1■■□□□ 1.77
CPNE1-216ENST00000437340 IL23AQ9NPF7 189 aa26.1■■□□□ 1.77
CPNE1-216ENST00000437340 MRPL42Q9Y6G3 142 aaKnown RBP26.1■■□□□ 1.77
CPNE1-216ENST00000437340 CARNS1A5YM72 827 aa26.09■■□□□ 1.77
CPNE1-216ENST00000437340 TIMM44O43615 452 aa26.09■■□□□ 1.77
CPNE1-216ENST00000437340 BPGMP07738 259 aa26.09■■□□□ 1.77
CPNE1-216ENST00000437340 TYK2P29597 1187 aa26.09■■□□□ 1.77
CPNE1-216ENST00000437340 HADHAP40939 763 aa26.09■■□□□ 1.77
CPNE1-216ENST00000437340 SERPINB8P50452 374 aa26.09■■□□□ 1.77
CPNE1-216ENST00000437340 POLD3Q15054 466 aaPredicted RBP26.09■■□□□ 1.77
CPNE1-216ENST00000437340 NADSYN1Q6IA69 706 aa26.09■■□□□ 1.77
CPNE1-216ENST00000437340 NUDCD3Q8IVD9 361 aa26.09■■□□□ 1.77
CPNE1-216ENST00000437340 E2F7Q96AV8 911 aa26.09■■□□□ 1.77
CPNE1-216ENST00000437340 AGAP2Q99490 1192 aa26.09■■□□□ 1.77
CPNE1-216ENST00000437340 MCMBPQ9BTE3 642 aa26.09■■□□□ 1.77
CPNE1-216ENST00000437340 GGT7Q9UJ14 662 aa26.09■■□□□ 1.77
CPNE1-216ENST00000437340 F5H5T6 163 aa26.08■■□□□ 1.77
CPNE1-216ENST00000437340 J3KR12 359 aa26.08■■□□□ 1.77
CPNE1-216ENST00000437340 DSG1Q02413 1049 aa26.08■■□□□ 1.77
CPNE1-216ENST00000437340 HECTD3Q5T447 861 aa26.08■■□□□ 1.77
CPNE1-216ENST00000437340 KDELC1Q6UW63 502 aa26.08■■□□□ 1.77
CPNE1-216ENST00000437340 ZNF689Q96CS4 500 aaPredicted RBP26.08■■□□□ 1.77
CPNE1-216ENST00000437340 MYRFLQ96LU7 910 aa26.08■■□□□ 1.77
CPNE1-216ENST00000437340 ZNF512Q96ME7 567 aaPredicted RBP26.08■■□□□ 1.77
CPNE1-216ENST00000437340 C7orf26Q96N11 449 aa26.08■■□□□ 1.77
CPNE1-216ENST00000437340 ZNF558Q96NG5 402 aa26.08■■□□□ 1.77
CPNE1-216ENST00000437340 NPHS2Q9NP85 383 aa26.08■■□□□ 1.77
CPNE1-216ENST00000437340 TCAF1Q9Y4C2 921 aa26.08■■□□□ 1.77
CPNE1-216ENST00000437340 ZNF840PA6NDX5 716 aa26.07■■□□□ 1.76
CPNE1-216ENST00000437340 ACSL4O60488 711 aa26.07■■□□□ 1.76
CPNE1-216ENST00000437340 PMPCBO75439 489 aa26.07■■□□□ 1.76
CPNE1-216ENST00000437340 KCNQ1P51787 676 aa26.07■■□□□ 1.76
CPNE1-216ENST00000437340 SERINC3Q13530 473 aa26.07■■□□□ 1.76
CPNE1-216ENST00000437340 SPDYAQ5MJ70 313 aa26.07■■□□□ 1.76
CPNE1-216ENST00000437340 C16orf59Q7L2K0 433 aa26.07■■□□□ 1.76
CPNE1-216ENST00000437340 C7orf61Q8IZ16 206 aa26.07■■□□□ 1.76
CPNE1-216ENST00000437340 SLC39A11Q8N1S5 342 aa26.07■■□□□ 1.76
CPNE1-216ENST00000437340 DCLK2Q8N568 766 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms