RNA–Protein interactions for RNA: ENST00000436679.2

C2CD3-206, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 1,134 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-206ENST00000436679 METTL3Q86U44 580 aaKnown RBP16.08■□□□□ 0.16
C2CD3-206ENST00000436679 NT5DC3Q86UY8 548 aa16.08■□□□□ 0.16
C2CD3-206ENST00000436679 PQLC3Q8N755 202 aa16.08■□□□□ 0.16
C2CD3-206ENST00000436679 ATP11CQ8NB49 1132 aa16.08■□□□□ 0.16
C2CD3-206ENST00000436679 UBE2Q2Q8WVN8 375 aa16.08■□□□□ 0.16
C2CD3-206ENST00000436679 HMGB4Q8WW32 186 aa16.08■□□□□ 0.16
C2CD3-206ENST00000436679 CASKIN2Q8WXE0 1202 aa16.08■□□□□ 0.16
C2CD3-206ENST00000436679 KRT35Q92764 455 aa16.08■□□□□ 0.16
C2CD3-206ENST00000436679 PTPRN2Q92932 1015 aa16.08■□□□□ 0.16
C2CD3-206ENST00000436679 ISG20Q96AZ6 181 aaKnown RBP16.08■□□□□ 0.16
C2CD3-206ENST00000436679 MRGPRX1Q96LB2 322 aa16.08■□□□□ 0.16
C2CD3-206ENST00000436679 RNF157Q96PX1 679 aa16.08■□□□□ 0.16
C2CD3-206ENST00000436679 MKRN2Q9H000 416 aaKnown RBP16.08■□□□□ 0.16
C2CD3-206ENST00000436679 PDFQ9HBH1 243 aa16.08■□□□□ 0.16
C2CD3-206ENST00000436679 SEMA4GQ9NTN9 838 aa16.08■□□□□ 0.16
C2CD3-206ENST00000436679 MFHAS1Q9Y4C4 1052 aa16.08■□□□□ 0.16
C2CD3-206ENST00000436679 PCDHA3Q9Y5H8 950 aa16.08■□□□□ 0.16
C2CD3-206ENST00000436679 CAPN6Q9Y6Q1 641 aa16.08■□□□□ 0.16
C2CD3-206ENST00000436679 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.07■□□□□ 0.16
C2CD3-206ENST00000436679 CCDC66A2RUB6 948 aa16.07■□□□□ 0.16
C2CD3-206ENST00000436679 K7ERQ8 282 aa16.07■□□□□ 0.16
C2CD3-206ENST00000436679 SMAD6O43541 496 aaKnown RBP16.07■□□□□ 0.16
C2CD3-206ENST00000436679 PRAMEF11O60813 436 aa16.07■□□□□ 0.16
C2CD3-206ENST00000436679 TNNT1P13805 278 aa16.07■□□□□ 0.16
C2CD3-206ENST00000436679 CNR2P34972 360 aa16.07■□□□□ 0.16
C2CD3-206ENST00000436679 MARCKSL1P49006 195 aa16.07■□□□□ 0.16
C2CD3-206ENST00000436679 ELAVL3Q14576 367 aaKnown RBP16.07■□□□□ 0.16
C2CD3-206ENST00000436679 INO80DQ53TQ3 878 aaPredicted RBP16.07■□□□□ 0.16
C2CD3-206ENST00000436679 C22orf39Q6P5X5 142 aa16.07■□□□□ 0.16
C2CD3-206ENST00000436679 RCOR2Q8IZ40 523 aa16.07■□□□□ 0.16
C2CD3-206ENST00000436679 PCDH20Q8N6Y1 951 aaKnown RBP16.07■□□□□ 0.16
C2CD3-206ENST00000436679 EXD1Q8NHP7 514 aa16.07■□□□□ 0.16
C2CD3-206ENST00000436679 RSPH9Q9H1X1 276 aaPredicted RBP16.07■□□□□ 0.16
C2CD3-206ENST00000436679 MTG2Q9H4K7 406 aa16.07■□□□□ 0.16
C2CD3-206ENST00000436679 BCCIPQ9P287 314 aaKnown RBP eCLIP16.07■□□□□ 0.16
C2CD3-206ENST00000436679 GUCA1BQ9UMX6 200 aa16.07■□□□□ 0.16
C2CD3-206ENST00000436679 CHD5Q8TDI0 1954 aa16.06■□□□□ 0.16
C2CD3-206ENST00000436679 MIF4GDA9UHW6 222 aaKnown RBP16.06■□□□□ 0.16
C2CD3-206ENST00000436679 DFFAO00273 331 aa16.06■□□□□ 0.16
C2CD3-206ENST00000436679 ALOX15BO15296 676 aa16.06■□□□□ 0.16
C2CD3-206ENST00000436679 GDF9O60383 454 aa16.06■□□□□ 0.16
C2CD3-206ENST00000436679 LRP3O75074 770 aa16.06■□□□□ 0.16
C2CD3-206ENST00000436679 ZNF821O75541 412 aaPredicted RBP16.06■□□□□ 0.16
C2CD3-206ENST00000436679 ZRANB2O95218 330 aaKnown RBP eCLIP16.06■□□□□ 0.16
C2CD3-206ENST00000436679 VAV1P15498 845 aa16.06■□□□□ 0.16
C2CD3-206ENST00000436679 CDKN2BP42772 138 aa16.06■□□□□ 0.16
C2CD3-206ENST00000436679 PEX5P50542 639 aa16.06■□□□□ 0.16
C2CD3-206ENST00000436679 ZBTB16Q05516 673 aa16.06■□□□□ 0.16
C2CD3-206ENST00000436679 CCDC6Q16204 474 aa16.06■□□□□ 0.16
C2CD3-206ENST00000436679 ACCSLQ4AC99 568 aa16.06■□□□□ 0.16
C2CD3-206ENST00000436679 ODF2Q5BJF6 829 aa16.06■□□□□ 0.16
C2CD3-206ENST00000436679 ZNF776Q68DI1 518 aaPredicted RBP16.06■□□□□ 0.16
C2CD3-206ENST00000436679 SLC9A4Q6AI14 798 aa16.06■□□□□ 0.16
C2CD3-206ENST00000436679 MFSD7Q6UXD7 560 aa16.06■□□□□ 0.16
C2CD3-206ENST00000436679 Q6ZVU0 165 aa16.06■□□□□ 0.16
C2CD3-206ENST00000436679 PEX26Q7Z412 305 aa16.06■□□□□ 0.16
C2CD3-206ENST00000436679 ZNF354CQ86Y25 554 aa16.06■□□□□ 0.16
C2CD3-206ENST00000436679 TMPRSS6Q8IU80 811 aa16.06■□□□□ 0.16
C2CD3-206ENST00000436679 LRRC49Q8IUZ0 686 aa16.06■□□□□ 0.16
C2CD3-206ENST00000436679 TP53INP2Q8IXH6 220 aa16.06■□□□□ 0.16
C2CD3-206ENST00000436679 PLPP6Q8IY26 295 aa16.06■□□□□ 0.16
C2CD3-206ENST00000436679 FAM160A2Q8N612 972 aaPredicted RBP16.06■□□□□ 0.16
C2CD3-206ENST00000436679 PRCCQ92733 491 aaPredicted RBP16.06■□□□□ 0.16
C2CD3-206ENST00000436679 RNF25Q96BH1 459 aaPredicted RBP16.06■□□□□ 0.16
C2CD3-206ENST00000436679 RBM41Q96IZ5 413 aaKnown RBP16.06■□□□□ 0.16
C2CD3-206ENST00000436679 AMFRQ9UKV5 643 aa16.06■□□□□ 0.16
C2CD3-206ENST00000436679 J3KR12 359 aa16.05■□□□□ 0.16
C2CD3-206ENST00000436679 MCF2LO15068 1137 aa16.05■□□□□ 0.16
C2CD3-206ENST00000436679 MFSD11O43934 449 aa16.05■□□□□ 0.16
C2CD3-206ENST00000436679 ZNF217O75362 1048 aa16.05■□□□□ 0.16
C2CD3-206ENST00000436679 ZFXP17010 805 aaPredicted RBP16.05■□□□□ 0.16
C2CD3-206ENST00000436679 COPS2P61201 443 aa16.05■□□□□ 0.16
C2CD3-206ENST00000436679 RPS14P62263 151 aaKnown RBP16.05■□□□□ 0.16
C2CD3-206ENST00000436679 IL10RBQ08334 325 aa16.05■□□□□ 0.16
C2CD3-206ENST00000436679 GALNT2Q10471 571 aa16.05■□□□□ 0.16
C2CD3-206ENST00000436679 PPP2R5EQ16537 467 aa16.05■□□□□ 0.16
C2CD3-206ENST00000436679 USP39Q53GS9 565 aaKnown RBP16.05■□□□□ 0.16
C2CD3-206ENST00000436679 TFDP3Q5H9I0 405 aa16.05■□□□□ 0.16
C2CD3-206ENST00000436679 SPOCD1Q6ZMY3 1216 aa16.05■□□□□ 0.16
C2CD3-206ENST00000436679 PRR23CQ6ZRP0 262 aa16.05■□□□□ 0.16
C2CD3-206ENST00000436679 STK40Q8N2I9 435 aa16.05■□□□□ 0.16
C2CD3-206ENST00000436679 PGBD3Q8N328 593 aa16.05■□□□□ 0.16
C2CD3-206ENST00000436679 PLD5Q8N7P1 536 aa16.05■□□□□ 0.16
C2CD3-206ENST00000436679 OR2A12Q8NGT7 310 aa16.05■□□□□ 0.16
C2CD3-206ENST00000436679 ERLEC1Q96DZ1 483 aa16.05■□□□□ 0.16
C2CD3-206ENST00000436679 SIPA1Q96FS4 1042 aa16.05■□□□□ 0.16
C2CD3-206ENST00000436679 CCDC114Q96M63 670 aa16.05■□□□□ 0.16
C2CD3-206ENST00000436679 ZNF830Q96NB3 372 aaPredicted RBP16.05■□□□□ 0.16
C2CD3-206ENST00000436679 ZNF599Q96NL3 588 aa16.05■□□□□ 0.16
C2CD3-206ENST00000436679 FAM129BQ96TA1 746 aa16.05■□□□□ 0.16
C2CD3-206ENST00000436679 MAK16Q9BXY0 300 aaKnown RBP16.05■□□□□ 0.16
C2CD3-206ENST00000436679 TPSD1Q9BZJ3 242 aa16.05■□□□□ 0.16
C2CD3-206ENST00000436679 SLC6A17Q9H1V8 727 aa16.05■□□□□ 0.16
C2CD3-206ENST00000436679 LZTFL1Q9NQ48 299 aa16.05■□□□□ 0.16
C2CD3-206ENST00000436679 USP36Q9P275 1121 aaKnown RBP16.05■□□□□ 0.16
C2CD3-206ENST00000436679 UBA2Q9UBT2 640 aaPredicted RBP16.05■□□□□ 0.16
C2CD3-206ENST00000436679 IPO11Q9UI26 975 aaKnown RBP16.05■□□□□ 0.16
C2CD3-206ENST00000436679 FCF1Q9Y324 198 aaKnown RBP16.05■□□□□ 0.16
C2CD3-206ENST00000436679 ACTL7AQ9Y615 435 aa16.05■□□□□ 0.16
C2CD3-206ENST00000436679 CKAP5Q14008 2032 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms