RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 MRGPRX3Q96LB0 322 aa16.84■□□□□ 0.29
CTDSPL-204ENST00000435525 OLFM3Q96PB7 478 aa16.84■□□□□ 0.29
CTDSPL-204ENST00000435525 GABRG3Q99928 467 aa16.84■□□□□ 0.29
CTDSPL-204ENST00000435525 EPHX3Q9H6B9 360 aa16.84■□□□□ 0.29
CTDSPL-204ENST00000435525 SLCO3A1Q9UIG8 710 aa16.84■□□□□ 0.29
CTDSPL-204ENST00000435525 CFAP69A5D8W1 941 aa16.83■□□□□ 0.28
CTDSPL-204ENST00000435525 RBP3P10745 1247 aa16.83■□□□□ 0.28
CTDSPL-204ENST00000435525 CCNB1P14635 433 aa16.83■□□□□ 0.28
CTDSPL-204ENST00000435525 WASP42768 502 aa16.83■□□□□ 0.28
CTDSPL-204ENST00000435525 MMP13P45452 471 aa16.83■□□□□ 0.28
CTDSPL-204ENST00000435525 MAPK8P45983 427 aa16.83■□□□□ 0.28
CTDSPL-204ENST00000435525 KLF1Q13351 362 aaPredicted RBP16.83■□□□□ 0.28
CTDSPL-204ENST00000435525 ENPP2Q13822 863 aa16.83■□□□□ 0.28
CTDSPL-204ENST00000435525 TUBB2AQ13885 445 aa16.83■□□□□ 0.28
CTDSPL-204ENST00000435525 SLC45A4Q5BKX6 768 aa16.83■□□□□ 0.28
CTDSPL-204ENST00000435525 TMEM31Q5JXX7 168 aa16.83■□□□□ 0.28
CTDSPL-204ENST00000435525 Q6ZS52 159 aa16.83■□□□□ 0.28
CTDSPL-204ENST00000435525 ADAT2Q7Z6V5 191 aaKnown RBP16.83■□□□□ 0.28
CTDSPL-204ENST00000435525 PLPP6Q8IY26 295 aa16.83■□□□□ 0.28
CTDSPL-204ENST00000435525 RYBPQ8N488 228 aaPredicted RBP16.83■□□□□ 0.28
CTDSPL-204ENST00000435525 NETO2Q8NC67 525 aa16.83■□□□□ 0.28
CTDSPL-204ENST00000435525 KIF18AQ8NI77 898 aa16.83■□□□□ 0.28
CTDSPL-204ENST00000435525 ACTRT1Q8TDG2 376 aa16.83■□□□□ 0.28
CTDSPL-204ENST00000435525 OR8D1Q8WZ84 308 aa16.83■□□□□ 0.28
CTDSPL-204ENST00000435525 GDAP1L1Q96MZ0 367 aa16.83■□□□□ 0.28
CTDSPL-204ENST00000435525 QKIQ96PU8 341 aaKnown RBP eCLIP16.83■□□□□ 0.282e-8■■■■■ 34.7
CTDSPL-204ENST00000435525 VAT1Q99536 393 aa16.83■□□□□ 0.28
CTDSPL-204ENST00000435525 LGMNQ99538 433 aa16.83■□□□□ 0.28
CTDSPL-204ENST00000435525 TUBB2BQ9BVA1 445 aa16.83■□□□□ 0.28
CTDSPL-204ENST00000435525 TMEM245Q9H330 911 aa16.83■□□□□ 0.28
CTDSPL-204ENST00000435525 PDFQ9HBH1 243 aa16.83■□□□□ 0.28
CTDSPL-204ENST00000435525 SPATA6Q9NWH7 488 aaPredicted RBP16.83■□□□□ 0.28
CTDSPL-204ENST00000435525 SEPT10Q9P0V9 454 aa16.83■□□□□ 0.28
CTDSPL-204ENST00000435525 SAE1Q9UBE0 346 aaPredicted RBP16.83■□□□□ 0.28
CTDSPL-204ENST00000435525 COL4A3Q01955 1670 aa16.82■□□□□ 0.28
CTDSPL-204ENST00000435525 TTC34A8MYJ7 566 aa16.82■□□□□ 0.28
CTDSPL-204ENST00000435525 LAMTOR5O43504 91 aa16.82■□□□□ 0.28
CTDSPL-204ENST00000435525 BNIP3LO60238 219 aa16.82■□□□□ 0.28
CTDSPL-204ENST00000435525 GSRP00390 522 aa16.82■□□□□ 0.28
CTDSPL-204ENST00000435525 MT-CO1P00395 513 aa16.82■□□□□ 0.28
CTDSPL-204ENST00000435525 CES1P23141 567 aa16.82■□□□□ 0.28
CTDSPL-204ENST00000435525 ACTN2P35609 894 aa16.82■□□□□ 0.28
CTDSPL-204ENST00000435525 CXCL12P48061 93 aa16.82■□□□□ 0.28
CTDSPL-204ENST00000435525 LMNB2Q03252 620 aa16.82■□□□□ 0.28
CTDSPL-204ENST00000435525 ADCY2Q08462 1091 aa16.82■□□□□ 0.28
CTDSPL-204ENST00000435525 FZD5Q13467 585 aa16.82■□□□□ 0.28
CTDSPL-204ENST00000435525 ELAVL3Q14576 367 aaKnown RBP16.82■□□□□ 0.28
CTDSPL-204ENST00000435525 GRM3Q14832 879 aa16.82■□□□□ 0.28
CTDSPL-204ENST00000435525 PRKD1Q15139 912 aaPredicted RBP16.82■□□□□ 0.28
CTDSPL-204ENST00000435525 CCNG2Q16589 344 aa16.82■□□□□ 0.28
CTDSPL-204ENST00000435525 CARD16Q5EG05 197 aa16.82■□□□□ 0.28
CTDSPL-204ENST00000435525 LEKR1Q6ZMV7 388 aa16.82■□□□□ 0.28
CTDSPL-204ENST00000435525 MAMSTRQ6ZN01 415 aa16.82■□□□□ 0.28
CTDSPL-204ENST00000435525 ARHGAP36Q6ZRI8 547 aa16.82■□□□□ 0.28
CTDSPL-204ENST00000435525 TP53INP2Q8IXH6 220 aa16.82■□□□□ 0.28
CTDSPL-204ENST00000435525 TSTD1Q8NFU3 115 aa16.82■□□□□ 0.28
CTDSPL-204ENST00000435525 ACOX2Q99424 681 aa16.82■□□□□ 0.28
CTDSPL-204ENST00000435525 FCF1Q9Y324 198 aaKnown RBP16.82■□□□□ 0.28
CTDSPL-204ENST00000435525 C5orf42Q9H799 3197 aa16.82■□□□□ 0.28
CTDSPL-204ENST00000435525 F5P12259 2224 aa16.81■□□□□ 0.28
CTDSPL-204ENST00000435525 PRR33A8MZF0 331 aa16.81■□□□□ 0.28
CTDSPL-204ENST00000435525 SGK1O00141 431 aa16.81■□□□□ 0.28
CTDSPL-204ENST00000435525 KRIT1O00522 736 aa16.81■□□□□ 0.28
CTDSPL-204ENST00000435525 ALOX15BO15296 676 aa16.81■□□□□ 0.28
CTDSPL-204ENST00000435525 GPR37L1O60883 481 aa16.81■□□□□ 0.28
CTDSPL-204ENST00000435525 HLA-EP13747 358 aa16.81■□□□□ 0.28
CTDSPL-204ENST00000435525 PRKCHP24723 683 aa16.81■□□□□ 0.28
CTDSPL-204ENST00000435525 STIP1P31948 543 aaKnown RBP16.81■□□□□ 0.28
CTDSPL-204ENST00000435525 IFI35P80217 286 aaPredicted RBP16.81■□□□□ 0.28
CTDSPL-204ENST00000435525 ITKQ08881 620 aa16.81■□□□□ 0.28
CTDSPL-204ENST00000435525 BYSLQ13895 437 aaKnown RBP16.81■□□□□ 0.28
CTDSPL-204ENST00000435525 CRY1Q16526 586 aa16.81■□□□□ 0.28
CTDSPL-204ENST00000435525 RALGPS1Q5JS13 557 aa16.81■□□□□ 0.28
CTDSPL-204ENST00000435525 FAM46CQ5VWP2 391 aa16.81■□□□□ 0.28
CTDSPL-204ENST00000435525 Q6ZVU0 165 aa16.81■□□□□ 0.28
CTDSPL-204ENST00000435525 CAMKK1Q8N5S9 505 aa16.81■□□□□ 0.28
CTDSPL-204ENST00000435525 PAF1Q8N7H5 531 aa16.81■□□□□ 0.28
CTDSPL-204ENST00000435525 OR2AP1Q8NGE2 309 aa16.81■□□□□ 0.28
CTDSPL-204ENST00000435525 COG1Q8WTW3 980 aa16.81■□□□□ 0.28
CTDSPL-204ENST00000435525 HTR3CQ8WXA8 447 aa16.81■□□□□ 0.28
CTDSPL-204ENST00000435525 MAML1Q92585 1016 aa16.81■□□□□ 0.28
CTDSPL-204ENST00000435525 PSKH2Q96QS6 385 aa16.81■□□□□ 0.28
CTDSPL-204ENST00000435525 RBM22Q9NW64 420 aaKnown RBP eCLIP16.81■□□□□ 0.28
CTDSPL-204ENST00000435525 BCCIPQ9P287 314 aaKnown RBP eCLIP16.81■□□□□ 0.28
CTDSPL-204ENST00000435525 FEZ2Q9UHY8 353 aaPredicted RBP16.81■□□□□ 0.28
CTDSPL-204ENST00000435525 TRHDEQ9UKU6 1024 aa16.81■□□□□ 0.28
CTDSPL-204ENST00000435525 ZNF148Q9UQR1 794 aa16.81■□□□□ 0.28
CTDSPL-204ENST00000435525 BCLAF3A2AJT9 711 aaKnown RBP16.8■□□□□ 0.28
CTDSPL-204ENST00000435525 WASH3PC4AMC7 463 aa16.8■□□□□ 0.28
CTDSPL-204ENST00000435525 C1QTNF3-AMACRE9PGA6 284 aa16.8■□□□□ 0.28
CTDSPL-204ENST00000435525 K7ERQ8 282 aa16.8■□□□□ 0.28
CTDSPL-204ENST00000435525 SMAD6O43541 496 aaKnown RBP16.8■□□□□ 0.28
CTDSPL-204ENST00000435525 POP4O95707 220 aaKnown RBP16.8■□□□□ 0.28
CTDSPL-204ENST00000435525 JCHAINP01591 159 aa16.8■□□□□ 0.28
CTDSPL-204ENST00000435525 PRNPP04156 253 aa16.8■□□□□ 0.28
CTDSPL-204ENST00000435525 CA4P22748 312 aa16.8■□□□□ 0.28
CTDSPL-204ENST00000435525 CSNK1DP48730 415 aa16.8■□□□□ 0.28
CTDSPL-204ENST00000435525 NUBP1P53384 320 aa16.8■□□□□ 0.28
CTDSPL-204ENST00000435525 NSUN2Q08J23 767 aaKnown RBP eCLIP16.8■□□□□ 0.282e-8■■■■■ 36.9
CTDSPL-204ENST00000435525 CCDC15Q0P6D6 951 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms