RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 TCAF2A6NFQ2 919 aa7.57□□□□□ -1.2
CPSF6-202ENST00000435070 EI24O14681 340 aa7.57□□□□□ -1.2
CPSF6-202ENST00000435070 HDAC3O15379 428 aa7.57□□□□□ -1.2
CPSF6-202ENST00000435070 HMGCRP04035 888 aa7.57□□□□□ -1.2
CPSF6-202ENST00000435070 PRKCGP05129 697 aa7.57□□□□□ -1.2
CPSF6-202ENST00000435070 TREML2Q5T2D2 321 aa7.57□□□□□ -1.2
CPSF6-202ENST00000435070 AFAP1L2Q8N4X5 818 aa7.57□□□□□ -1.2
CPSF6-202ENST00000435070 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.57□□□□□ -1.2
CPSF6-202ENST00000435070 PTCD2Q8WV60 388 aaKnown RBP7.57□□□□□ -1.2
CPSF6-202ENST00000435070 TFAP2BQ92481 460 aa7.57□□□□□ -1.2
CPSF6-202ENST00000435070 SNX19Q92543 992 aa7.57□□□□□ -1.2
CPSF6-202ENST00000435070 KCND2Q9NZV8 630 aa7.57□□□□□ -1.2
CPSF6-202ENST00000435070 COPG1Q9Y678 874 aaKnown RBP7.57□□□□□ -1.2
CPSF6-202ENST00000435070 H0YC42 278 aa7.57□□□□□ -1.2
CPSF6-202ENST00000435070 JRKO75564 520 aa7.57□□□□□ -1.2
CPSF6-202ENST00000435070 VNN1O95497 513 aa7.57□□□□□ -1.2
CPSF6-202ENST00000435070 SPCS2Q15005 226 aa7.57□□□□□ -1.2
CPSF6-202ENST00000435070 POLD3Q15054 466 aaPredicted RBP7.57□□□□□ -1.2
CPSF6-202ENST00000435070 C15orf59Q2T9L4 293 aaPredicted RBP7.57□□□□□ -1.2
CPSF6-202ENST00000435070 PTPN20Q4JDL3 420 aa7.57□□□□□ -1.2
CPSF6-202ENST00000435070 ARHGEF16Q5VV41 709 aa7.57□□□□□ -1.2
CPSF6-202ENST00000435070 DENND1BQ6P3S1 775 aa7.57□□□□□ -1.2
CPSF6-202ENST00000435070 MMAAQ8IVH4 418 aaKnown RBP7.57□□□□□ -1.2
CPSF6-202ENST00000435070 CCDC60Q8IWA6 550 aaPredicted RBP7.57□□□□□ -1.2
CPSF6-202ENST00000435070 SPATA6LQ8N4H0 392 aa7.57□□□□□ -1.2
CPSF6-202ENST00000435070 TMC2Q8TDI7 906 aa7.57□□□□□ -1.2
CPSF6-202ENST00000435070 CDKL2Q92772 493 aa7.57□□□□□ -1.2
CPSF6-202ENST00000435070 PBXIP1Q96AQ6 731 aa7.57□□□□□ -1.2
CPSF6-202ENST00000435070 SH3YL1Q96HL8 342 aaPredicted RBP7.57□□□□□ -1.2
CPSF6-202ENST00000435070 CSF3RQ99062 836 aa7.57□□□□□ -1.2
CPSF6-202ENST00000435070 TCF12Q99081 682 aa7.57□□□□□ -1.2
CPSF6-202ENST00000435070 MROQ9BYG7 248 aa7.57□□□□□ -1.2
CPSF6-202ENST00000435070 ING2Q9H160 280 aa7.57□□□□□ -1.2
CPSF6-202ENST00000435070 UPF3AQ9H1J1 476 aaKnown RBP7.57□□□□□ -1.2
CPSF6-202ENST00000435070 PLEKHA5Q9HAU0 1116 aa7.57□□□□□ -1.2
CPSF6-202ENST00000435070 PNPLA8Q9NP80 782 aa7.57□□□□□ -1.2
CPSF6-202ENST00000435070 GDAP2Q9NXN4 497 aa7.57□□□□□ -1.2
CPSF6-202ENST00000435070 IFT80Q9P2H3 777 aaPredicted RBP7.57□□□□□ -1.2
CPSF6-202ENST00000435070 ZDHHC2Q9UIJ5 367 aa7.57□□□□□ -1.2
CPSF6-202ENST00000435070 BOLA1Q9Y3E2 137 aa7.57□□□□□ -1.2
CPSF6-202ENST00000435070 TK2O00142 265 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 CCRL2O00421 344 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 TRIM13O60858 407 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 ITGBL1O95965 494 aaPredicted RBP7.56□□□□□ -1.2
CPSF6-202ENST00000435070 C8BP07358 591 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 POLR2BP30876 1174 aaKnown RBP7.56□□□□□ -1.2
CPSF6-202ENST00000435070 SLC7A2P52569 658 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 RSBN1LQ6PCB5 846 aaPredicted RBP7.56□□□□□ -1.2
CPSF6-202ENST00000435070 SPPL2CQ8IUH8 684 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 IQCF2Q8IXL9 164 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 ELMO1Q92556 727 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 MFSD14AQ96MC6 490 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 SPC25Q9HBM1 224 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 DDX28Q9NUL7 540 aaKnown RBP7.56□□□□□ -1.2
CPSF6-202ENST00000435070 USP18Q9UMW8 372 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 CCDC159P0C7I6 412 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 CHRNB1P11230 501 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 MGAT1P26572 445 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 OLIG2Q13516 323 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 IMPG1Q17R60 797 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 ZACNQ401N2 412 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 ATAD3BQ5T9A4 648 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 FAM117BQ6P1L5 589 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 PEX5LQ8IYB4 626 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 PQLC3Q8N755 202 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 PSMA8Q8TAA3 256 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 ZNF420Q8TAQ5 688 aaPredicted RBP7.56□□□□□ -1.2
CPSF6-202ENST00000435070 ASB9Q96DX5 294 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 TRIT1Q9H3H1 467 aaKnown RBP7.56□□□□□ -1.2
CPSF6-202ENST00000435070 NGRNQ9NPE2 291 aaKnown RBP7.56□□□□□ -1.2
CPSF6-202ENST00000435070 PKD2L2Q9NZM6 624 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 PRR12Q9ULL5 1215 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 RABL2BQ9UNT1 228 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 CDYLQ9Y232 598 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 SYNCRIPO60506 623 aaKnown RBP7.56□□□□□ -1.2
CPSF6-202ENST00000435070 DLGAP3O95886 979 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 MYCLP1P12525 358 aaPredicted RBP7.56□□□□□ -1.2
CPSF6-202ENST00000435070 STILQ15468 1287 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 THNSL1Q8IYQ7 743 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 DCLK2Q8N568 766 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 DHRSXQ8N5I4 330 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 OR9I1Q8NGQ6 314 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 FNIP1Q8TF40 1166 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 OTUD5Q96G74 571 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 CPB2Q96IY4 423 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 PAWRQ96IZ0 340 aaKnown RBP7.56□□□□□ -1.2
CPSF6-202ENST00000435070 SNX15Q9NRS6 342 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 AGO2Q9UKV8 859 aaKnown RBP7.56□□□□□ -1.2
CPSF6-202ENST00000435070 PSME2Q9UL46 239 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 IFT52Q9Y366 437 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 TLL2Q9Y6L7 1015 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 TNFRSF10AO00220 468 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 MSI1O43347 362 aaKnown RBP7.56□□□□□ -1.2
CPSF6-202ENST00000435070 IL18RAPO95256 599 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 CST3P01034 146 aaPredicted RBP7.56□□□□□ -1.2
CPSF6-202ENST00000435070 ADSLP30566 484 aaPredicted RBP7.56□□□□□ -1.2
CPSF6-202ENST00000435070 KRT76Q01546 638 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 NOMO1Q15155 1222 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 CRTC3Q6UUV7 619 aa7.56□□□□□ -1.2
CPSF6-202ENST00000435070 ABRAXAS1Q6UWZ7 409 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms