RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 KLHL42Q9P2K6 505 aa3.99□□□□□ -1.77
PTPN4-205ENST00000433888 TAF1P21675 1872 aa3.98□□□□□ -1.77
PTPN4-205ENST00000433888 ANO9A1A5B4 782 aa3.98□□□□□ -1.77
PTPN4-205ENST00000433888 AQP12BA6NM10 295 aa3.98□□□□□ -1.77
PTPN4-205ENST00000433888 RNMTO43148 476 aaKnown RBP3.98□□□□□ -1.77
PTPN4-205ENST00000433888 SERPINI2O75830 405 aa3.98□□□□□ -1.77
PTPN4-205ENST00000433888 DDAH2O95865 285 aa3.98□□□□□ -1.77
PTPN4-205ENST00000433888 MXI1P50539 228 aa3.98□□□□□ -1.77
PTPN4-205ENST00000433888 DDR1Q08345 913 aa3.98□□□□□ -1.77
PTPN4-205ENST00000433888 CTTNQ14247 550 aaKnown RBP3.98□□□□□ -1.77
PTPN4-205ENST00000433888 SF3B4Q15427 424 aaKnown RBP eCLIP3.98□□□□□ -1.77
PTPN4-205ENST00000433888 LONRF1Q17RB8 773 aa3.98□□□□□ -1.77
PTPN4-205ENST00000433888 TBRG1Q3YBR2 411 aa3.98□□□□□ -1.77
PTPN4-205ENST00000433888 EFHC1Q5JVL4 640 aa3.98□□□□□ -1.77
PTPN4-205ENST00000433888 SMIM29Q86T20 159 aa3.98□□□□□ -1.77
PTPN4-205ENST00000433888 RBFAQ8N0V3 343 aa3.98□□□□□ -1.77
PTPN4-205ENST00000433888 TCF7L2Q9NQB0 619 aa3.98□□□□□ -1.77
PTPN4-205ENST00000433888 RCE1Q9Y256 329 aa3.98□□□□□ -1.77
PTPN4-205ENST00000433888 CYP21A2P08686 494 aa3.97□□□□□ -1.77
PTPN4-205ENST00000433888 PCP4P48539 62 aa3.97□□□□□ -1.77
PTPN4-205ENST00000433888 CLCNKBP51801 687 aa3.97□□□□□ -1.77
PTPN4-205ENST00000433888 ADORA2A-AS1P86434 159 aa3.97□□□□□ -1.77
PTPN4-205ENST00000433888 TBC1D9BQ66K14 1250 aa3.97□□□□□ -1.77
PTPN4-205ENST00000433888 HIST2H2BCQ6DN03 193 aa3.97□□□□□ -1.77
PTPN4-205ENST00000433888 RETSATQ6NUM9 610 aa3.97□□□□□ -1.77
PTPN4-205ENST00000433888 DSTYKQ6XUX3 929 aa3.97□□□□□ -1.77
PTPN4-205ENST00000433888 GATAD2AQ86YP4 633 aa3.97□□□□□ -1.77
PTPN4-205ENST00000433888 SCN4BQ8IWT1 228 aa3.97□□□□□ -1.77
PTPN4-205ENST00000433888 VPS52Q8N1B4 723 aa3.97□□□□□ -1.77
PTPN4-205ENST00000433888 PARD3BQ8TEW8 1205 aa3.97□□□□□ -1.77
PTPN4-205ENST00000433888 STYXQ8WUJ0 223 aa3.97□□□□□ -1.77
PTPN4-205ENST00000433888 MUL1Q969V5 352 aa3.97□□□□□ -1.77
PTPN4-205ENST00000433888 CCDC138Q96M89 665 aa3.97□□□□□ -1.77
PTPN4-205ENST00000433888 ABHD16BQ9H3Z7 469 aa3.97□□□□□ -1.77
PTPN4-205ENST00000433888 SLC25A13Q9UJS0 675 aa3.97□□□□□ -1.77
PTPN4-205ENST00000433888 IGLV5-37A0A075B6J1 123 aa3.96□□□□□ -1.78
PTPN4-205ENST00000433888 A0A0U1RQJ8 604 aa3.96□□□□□ -1.78
PTPN4-205ENST00000433888 TMEM247A6NEH6 219 aa3.96□□□□□ -1.78
PTPN4-205ENST00000433888 DDTLA6NHG4 134 aaPredicted RBP3.96□□□□□ -1.78
PTPN4-205ENST00000433888 NPIPB11E5RHQ5 1161 aa3.96□□□□□ -1.78
PTPN4-205ENST00000433888 ITM2AO43736 263 aa3.96□□□□□ -1.78
PTPN4-205ENST00000433888 LYL1P12980 280 aa3.96□□□□□ -1.78
PTPN4-205ENST00000433888 ABCB4P21439 1286 aa3.96□□□□□ -1.78
PTPN4-205ENST00000433888 GSTM2P28161 218 aa3.96□□□□□ -1.78
PTPN4-205ENST00000433888 ARL16Q0P5N6 197 aa3.96□□□□□ -1.78
PTPN4-205ENST00000433888 ALKBH1Q13686 389 aaKnown RBP3.96□□□□□ -1.78
PTPN4-205ENST00000433888 DCTN1Q14203 1278 aa3.96□□□□□ -1.78
PTPN4-205ENST00000433888 WDR5BQ86VZ2 330 aa3.96□□□□□ -1.78
PTPN4-205ENST00000433888 PALB2Q86YC2 1186 aa3.96□□□□□ -1.78
PTPN4-205ENST00000433888 TMEM18Q96B42 140 aa3.96□□□□□ -1.78
PTPN4-205ENST00000433888 EID2BQ96D98 161 aa3.96□□□□□ -1.78
PTPN4-205ENST00000433888 ADGRG7Q96K78 797 aa3.96□□□□□ -1.78
PTPN4-205ENST00000433888 TRIM31Q9BZY9 425 aa3.96□□□□□ -1.78
PTPN4-205ENST00000433888 A0A1B0GVM2 712 aa3.95□□□□□ -1.78
PTPN4-205ENST00000433888 C17orf100A8MU93 164 aa3.95□□□□□ -1.78
PTPN4-205ENST00000433888 EFCAB8A8MWE9 144 aa3.95□□□□□ -1.78
PTPN4-205ENST00000433888 PRAC2D3DTV9 90 aa3.95□□□□□ -1.78
PTPN4-205ENST00000433888 EYA2O00167 538 aa3.95□□□□□ -1.78
PTPN4-205ENST00000433888 TULP2O00295 520 aa3.95□□□□□ -1.78
PTPN4-205ENST00000433888 TNFRSF6BO95407 300 aa3.95□□□□□ -1.78
PTPN4-205ENST00000433888 GYS1P13807 737 aa3.95□□□□□ -1.78
PTPN4-205ENST00000433888 C21orf33P30042 268 aaPredicted RBP3.95□□□□□ -1.78
PTPN4-205ENST00000433888 AVPR2P30518 371 aa3.95□□□□□ -1.78
PTPN4-205ENST00000433888 AK2P54819 239 aa3.95□□□□□ -1.78
PTPN4-205ENST00000433888 DLG1Q12959 904 aa3.95□□□□□ -1.78
PTPN4-205ENST00000433888 SNTA1Q13424 505 aa3.95□□□□□ -1.78
PTPN4-205ENST00000433888 PTK2BQ14289 1009 aa3.95□□□□□ -1.78
PTPN4-205ENST00000433888 SPARCL1Q14515 664 aa3.95□□□□□ -1.78
PTPN4-205ENST00000433888 AADACL2Q6P093 401 aa3.95□□□□□ -1.78
PTPN4-205ENST00000433888 ANKRD13AQ8IZ07 590 aa3.95□□□□□ -1.78
PTPN4-205ENST00000433888 SPATA20Q8TB22 786 aa3.95□□□□□ -1.78
PTPN4-205ENST00000433888 FAM71BQ8TC56 605 aa3.95□□□□□ -1.78
PTPN4-205ENST00000433888 ARRDC3Q96B67 414 aa3.95□□□□□ -1.78
PTPN4-205ENST00000433888 SGCZQ96LD1 299 aa3.95□□□□□ -1.78
PTPN4-205ENST00000433888 IL17FQ96PD4 163 aa3.95□□□□□ -1.78
PTPN4-205ENST00000433888 MSTO1Q9BUK6 570 aa3.95□□□□□ -1.78
PTPN4-205ENST00000433888 CADM1Q9BY67 442 aaKnown RBP3.95□□□□□ -1.78
PTPN4-205ENST00000433888 CLK4Q9HAZ1 481 aaKnown RBP3.95□□□□□ -1.78
PTPN4-205ENST00000433888 PHTF1Q9UMS5 762 aa3.95□□□□□ -1.78
PTPN4-205ENST00000433888 ADAM18Q9Y3Q7 739 aa3.95□□□□□ -1.78
PTPN4-205ENST00000433888 DYTNA2CJ06 578 aa3.94□□□□□ -1.78
PTPN4-205ENST00000433888 MAGEA13PA6NCF6 341 aa3.94□□□□□ -1.78
PTPN4-205ENST00000433888 PAK4O96013 591 aaPredicted RBP3.94□□□□□ -1.78
PTPN4-205ENST00000433888 MMP3P08254 477 aa3.94□□□□□ -1.78
PTPN4-205ENST00000433888 RFC1P35251 1148 aaPredicted RBP3.94□□□□□ -1.78
PTPN4-205ENST00000433888 DPP6P42658 865 aa3.94□□□□□ -1.78
PTPN4-205ENST00000433888 GLIPR1P48060 266 aa3.94□□□□□ -1.78
PTPN4-205ENST00000433888 MYBPHQ13203 477 aa3.94□□□□□ -1.78
PTPN4-205ENST00000433888 GALNTL6Q49A17 601 aa3.94□□□□□ -1.78
PTPN4-205ENST00000433888 GXYLT1Q4G148 440 aa3.94□□□□□ -1.78
PTPN4-205ENST00000433888 TTC22Q5TAA0 569 aa3.94□□□□□ -1.78
PTPN4-205ENST00000433888 TMEM268Q5VZI3 342 aa3.94□□□□□ -1.78
PTPN4-205ENST00000433888 NFRKBQ6P4R8 1299 aa3.94□□□□□ -1.78
PTPN4-205ENST00000433888 PATL1Q86TB9 770 aaKnown RBP3.94□□□□□ -1.78
PTPN4-205ENST00000433888 SYTL1Q8IYJ3 562 aa3.94□□□□□ -1.78
PTPN4-205ENST00000433888 NAGSQ8N159 534 aa3.94□□□□□ -1.78
PTPN4-205ENST00000433888 DEPTORQ8TB45 409 aa3.94□□□□□ -1.78
PTPN4-205ENST00000433888 GPT2Q8TD30 523 aa3.94□□□□□ -1.78
PTPN4-205ENST00000433888 KCNJ9Q92806 393 aa3.94□□□□□ -1.78
PTPN4-205ENST00000433888 TMEM41AQ96HV5 264 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms