RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 CEP44Q9C0F1 390 aa15.82■□□□□ 0.12
TREX1-201ENST00000433541 KLC2Q9H0B6 622 aa15.82■□□□□ 0.12
TREX1-201ENST00000433541 RSPH9Q9H1X1 276 aaPredicted RBP15.82■□□□□ 0.12
TREX1-201ENST00000433541 SEMA4AQ9H3S1 761 aa15.82■□□□□ 0.12
TREX1-201ENST00000433541 SMG5Q9UPR3 1016 aaKnown RBP15.82■□□□□ 0.12
TREX1-201ENST00000433541 ANKRD36A6QL64 1941 aa15.82■□□□□ 0.12
TREX1-201ENST00000433541 A0A0U1RQJ8 604 aa15.81■□□□□ 0.12
TREX1-201ENST00000433541 J3KR12 359 aa15.81■□□□□ 0.12
TREX1-201ENST00000433541 APOL1O14791 398 aa15.81■□□□□ 0.12
TREX1-201ENST00000433541 MFSD11O43934 449 aa15.81■□□□□ 0.12
TREX1-201ENST00000433541 PALMO75781 387 aa15.81■□□□□ 0.12
TREX1-201ENST00000433541 TMCC1O94876 653 aa15.81■□□□□ 0.12
TREX1-201ENST00000433541 ADH1BP00325 375 aa15.81■□□□□ 0.12
TREX1-201ENST00000433541 P2RY2P41231 377 aa15.81■□□□□ 0.12
TREX1-201ENST00000433541 VASPP50552 380 aaPredicted RBP15.81■□□□□ 0.12
TREX1-201ENST00000433541 RPS14P62263 151 aaKnown RBP15.81■□□□□ 0.12
TREX1-201ENST00000433541 SNRPD1P62314 119 aaKnown RBP15.81■□□□□ 0.12
TREX1-201ENST00000433541 RPL6Q02878 288 aaKnown RBP15.81■□□□□ 0.12
TREX1-201ENST00000433541 POM121L1PQ3SYA9 428 aa15.81■□□□□ 0.12
TREX1-201ENST00000433541 FAM46CQ5VWP2 391 aa15.81■□□□□ 0.12
TREX1-201ENST00000433541 KAZNQ674X7 775 aa15.81■□□□□ 0.12
TREX1-201ENST00000433541 PCDH19Q8TAB3 1148 aa15.81■□□□□ 0.12
TREX1-201ENST00000433541 FRS2Q8WU20 508 aa15.81■□□□□ 0.12
TREX1-201ENST00000433541 TSC1Q92574 1164 aa15.81■□□□□ 0.12
TREX1-201ENST00000433541 RBM41Q96IZ5 413 aaKnown RBP15.81■□□□□ 0.12
TREX1-201ENST00000433541 PHOX2BQ99453 314 aa15.81■□□□□ 0.12
TREX1-201ENST00000433541 CINPQ9BW66 212 aaPredicted RBP15.81■□□□□ 0.12
TREX1-201ENST00000433541 ZDHHC6Q9H6R6 413 aa15.81■□□□□ 0.12
TREX1-201ENST00000433541 CD248Q9HCU0 757 aa15.81■□□□□ 0.12
TREX1-201ENST00000433541 CD93Q9NPY3 652 aa15.81■□□□□ 0.12
TREX1-201ENST00000433541 DYRK4Q9NR20 520 aa15.81■□□□□ 0.12
TREX1-201ENST00000433541 NCDNQ9UBB6 729 aa15.81■□□□□ 0.12
TREX1-201ENST00000433541 IPO11Q9UI26 975 aaKnown RBP15.81■□□□□ 0.12
TREX1-201ENST00000433541 AMFRQ9UKV5 643 aa15.81■□□□□ 0.12
TREX1-201ENST00000433541 HEY1Q9Y5J3 304 aa15.81■□□□□ 0.12
TREX1-201ENST00000433541 GRID2IPA4D2P6 1211 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 KPNA3O00505 521 aaPredicted RBP15.8■□□□□ 0.12
TREX1-201ENST00000433541 KRIT1O00522 736 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 ALOX15BO15296 676 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 MID1O15344 667 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 PRAMEF11O60813 436 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 RNASEH2AO75792 299 aaKnown RBP15.8■□□□□ 0.12
TREX1-201ENST00000433541 RHOBTB1O94844 696 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 ZRANB2O95218 330 aaKnown RBP eCLIP15.8■□□□□ 0.12
TREX1-201ENST00000433541 MAP3K6O95382 1288 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 FTCDO95954 541 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 IGSF6O95976 241 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 LMNAP02545 664 aaKnown RBP15.8■□□□□ 0.12
TREX1-201ENST00000433541 SLC8A1P32418 973 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 CETN2P41208 172 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 DHPSP49366 369 aaPredicted RBP15.8■□□□□ 0.12
TREX1-201ENST00000433541 TPMTP51580 245 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 ARSEP51690 589 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 ZBTB16Q05516 673 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 RAD51Q06609 339 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 ZNF235Q14590 738 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 LLGL1Q15334 1064 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 CARD16Q5EG05 197 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 CCDC181Q5TID7 509 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 NCBP2-AS2Q69YL0 99 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 SLC36A4Q6YBV0 504 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 ARMCX6Q7L4S7 300 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 LPCAT2Q7L5N7 544 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 KBTBD6Q86V97 674 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 ARHGAP12Q8IWW6 846 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 BBS5Q8N3I7 341 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 UBL4BQ8N7F7 174 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 FRMD1Q8N878 549 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 CCNYQ8ND76 341 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 OR6K2Q8NGY2 324 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 PIP4K2CQ8TBX8 421 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 FAM71BQ8TC56 605 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 CASKIN2Q8WXE0 1202 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 GDAP1L1Q96MZ0 367 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 RNF157Q96PX1 679 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 ALS2CR12Q96Q35 445 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 EPC1Q9H2F5 836 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 FBXL12Q9NXK8 326 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 IL36AQ9UHA7 158 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 GMEB2Q9UKD1 530 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 SCML1Q9UN30 329 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 VPS13AQ96RL7 3174 aa15.8■□□□□ 0.12
TREX1-201ENST00000433541 NUMA1Q14980 2115 aa15.79■□□□□ 0.12
TREX1-201ENST00000433541 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.79■□□□□ 0.12
TREX1-201ENST00000433541 IGHV1OR15-9A0A0B4J2B8 117 aa15.79■□□□□ 0.12
TREX1-201ENST00000433541 A0A1W2PP55 124 aa15.79■□□□□ 0.12
TREX1-201ENST00000433541 CCDC66A2RUB6 948 aa15.79■□□□□ 0.12
TREX1-201ENST00000433541 FAM47DPA6NHR8 397 aa15.79■□□□□ 0.12
TREX1-201ENST00000433541 MCF2LO15068 1137 aa15.79■□□□□ 0.12
TREX1-201ENST00000433541 PRNPP04156 253 aa15.79■□□□□ 0.12
TREX1-201ENST00000433541 ZFXP17010 805 aaPredicted RBP15.79■□□□□ 0.12
TREX1-201ENST00000433541 BCKDHBP21953 392 aa15.79■□□□□ 0.12
TREX1-201ENST00000433541 IL4RP24394 825 aa15.79■□□□□ 0.12
TREX1-201ENST00000433541 CD6P30203 668 aa15.79■□□□□ 0.12
TREX1-201ENST00000433541 OXTRP30559 389 aa15.79■□□□□ 0.12
TREX1-201ENST00000433541 CHRNA3P32297 505 aa15.79■□□□□ 0.12
TREX1-201ENST00000433541 MARCKSL1P49006 195 aa15.79■□□□□ 0.12
TREX1-201ENST00000433541 CCNHP51946 323 aaPredicted RBP15.79■□□□□ 0.12
TREX1-201ENST00000433541 IL10RBQ08334 325 aa15.79■□□□□ 0.12
TREX1-201ENST00000433541 MAP7D1Q3KQU3 841 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 204.7 ms