RNA–Protein interactions for RNA: ENST00000429205.6

SENP3-202, Transcript of SUMO specific peptidase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SENP3, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-202ENST00000429205 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.72□□□□□ -0.21
SENP3-202ENST00000429205 OGDHLQ9ULD0 1010 aa13.72□□□□□ -0.21
SENP3-202ENST00000429205 ATP11BQ9Y2G3 1177 aa13.72□□□□□ -0.21
SENP3-202ENST00000429205 ARHGAP10A1A4S6 786 aa13.71□□□□□ -0.21
SENP3-202ENST00000429205 TRIM64A6NGJ6 449 aa13.71□□□□□ -0.21
SENP3-202ENST00000429205 TRIM64BA6NI03 449 aa13.71□□□□□ -0.21
SENP3-202ENST00000429205 ADCY8P40145 1251 aa13.71□□□□□ -0.21
SENP3-202ENST00000429205 VCPP55072 806 aaKnown RBP13.71□□□□□ -0.21
SENP3-202ENST00000429205 OTUD4Q01804 1114 aaKnown RBP13.71□□□□□ -0.21
SENP3-202ENST00000429205 RNASELQ05823 741 aaKnown RBP13.71□□□□□ -0.21
SENP3-202ENST00000429205 CALCOCO2Q13137 446 aa13.71□□□□□ -0.21
SENP3-202ENST00000429205 DPYSL3Q14195 570 aa13.71□□□□□ -0.21
SENP3-202ENST00000429205 GRM2Q14416 872 aa13.71□□□□□ -0.21
SENP3-202ENST00000429205 OASLQ15646 514 aaKnown RBP13.71□□□□□ -0.21
SENP3-202ENST00000429205 CA9Q16790 459 aa13.71□□□□□ -0.21
SENP3-202ENST00000429205 TCTN1Q2MV58 587 aa13.71□□□□□ -0.21
SENP3-202ENST00000429205 INTS6LQ5JSJ4 861 aaKnown RBP13.71□□□□□ -0.21
SENP3-202ENST00000429205 C4orf22Q6V702 233 aa13.71□□□□□ -0.21
SENP3-202ENST00000429205 GALNT7Q86SF2 657 aa13.71□□□□□ -0.21
SENP3-202ENST00000429205 LRRTM3Q86VH5 581 aa13.71□□□□□ -0.21
SENP3-202ENST00000429205 CLVS1Q8IUQ0 354 aaPredicted RBP13.71□□□□□ -0.21
SENP3-202ENST00000429205 COLGALT2Q8IYK4 626 aa13.71□□□□□ -0.21
SENP3-202ENST00000429205 DEFB106AQ8N104 65 aa13.71□□□□□ -0.21
SENP3-202ENST00000429205 URGCPQ8TCY9 931 aa13.71□□□□□ -0.21
SENP3-202ENST00000429205 BIRC8Q96P09 236 aa13.71□□□□□ -0.21
SENP3-202ENST00000429205 TBCBQ99426 244 aa13.71□□□□□ -0.21
SENP3-202ENST00000429205 PRMT1Q99873 361 aaKnown RBP13.71□□□□□ -0.21
SENP3-202ENST00000429205 SNRNP25Q9BV90 132 aaKnown RBP13.71□□□□□ -0.21
SENP3-202ENST00000429205 TXLNGQ9NUQ3 528 aa13.71□□□□□ -0.21
SENP3-202ENST00000429205 TMLHEQ9NVH6 421 aa13.71□□□□□ -0.21
SENP3-202ENST00000429205 TMEM161AQ9NX61 479 aa13.71□□□□□ -0.21
SENP3-202ENST00000429205 DNAJB4Q9UDY4 337 aa13.71□□□□□ -0.21
SENP3-202ENST00000429205 KCNN3Q9UGI6 736 aa13.71□□□□□ -0.21
SENP3-202ENST00000429205 GGT7Q9UJ14 662 aa13.71□□□□□ -0.21
SENP3-202ENST00000429205 TSC2P49815 1807 aa13.71□□□□□ -0.22
SENP3-202ENST00000429205 NDC80O14777 642 aa13.71□□□□□ -0.22
SENP3-202ENST00000429205 NRP1O14786 923 aa13.71□□□□□ -0.22
SENP3-202ENST00000429205 AP1G1O43747 822 aa13.71□□□□□ -0.22
SENP3-202ENST00000429205 SEC24DO94855 1032 aaPredicted RBP13.71□□□□□ -0.22
SENP3-202ENST00000429205 KRT75O95678 551 aa13.71□□□□□ -0.22
SENP3-202ENST00000429205 FYNP06241 537 aa13.71□□□□□ -0.22
SENP3-202ENST00000429205 KLRC2P26717 231 aa13.71□□□□□ -0.22
SENP3-202ENST00000429205 MATKP42679 507 aa13.71□□□□□ -0.22
SENP3-202ENST00000429205 MAPKAPK2P49137 400 aa13.71□□□□□ -0.22
SENP3-202ENST00000429205 YWHAZP63104 245 aaKnown RBP13.71□□□□□ -0.22
SENP3-202ENST00000429205 AP1B1Q10567 949 aa13.71□□□□□ -0.22
SENP3-202ENST00000429205 TGFBIQ15582 683 aa13.71□□□□□ -0.22
SENP3-202ENST00000429205 HFE2Q6ZVN8 426 aa13.71□□□□□ -0.22
SENP3-202ENST00000429205 RIBC1Q8N443 379 aaPredicted RBP13.71□□□□□ -0.22
SENP3-202ENST00000429205 KIF2BQ8N4N8 673 aa13.71□□□□□ -0.22
SENP3-202ENST00000429205 ALLCQ8N6M5 410 aa13.71□□□□□ -0.22
SENP3-202ENST00000429205 SLC35B2Q8TB61 432 aa13.71□□□□□ -0.22
SENP3-202ENST00000429205 SPATA18Q8TC71 538 aa13.71□□□□□ -0.22
SENP3-202ENST00000429205 TTC9Q92623 222 aa13.71□□□□□ -0.22
SENP3-202ENST00000429205 NKD2Q969F2 451 aaPredicted RBP13.71□□□□□ -0.22
SENP3-202ENST00000429205 PGM2Q96G03 612 aa13.71□□□□□ -0.22
SENP3-202ENST00000429205 SMARCD1Q96GM5 515 aa13.71□□□□□ -0.22
SENP3-202ENST00000429205 NUDCD1Q96RS6 583 aa13.71□□□□□ -0.22
SENP3-202ENST00000429205 PKMYT1Q99640 499 aa13.71□□□□□ -0.22
SENP3-202ENST00000429205 TMEM121Q9BTD3 319 aa13.71□□□□□ -0.22
SENP3-202ENST00000429205 MRPL1Q9BYD6 325 aaKnown RBP13.71□□□□□ -0.22
SENP3-202ENST00000429205 ULBP1Q9BZM6 244 aa13.71□□□□□ -0.22
SENP3-202ENST00000429205 C10orf88Q9H8K7 445 aa13.71□□□□□ -0.22
SENP3-202ENST00000429205 PALMDQ9NP74 551 aa13.71□□□□□ -0.22
SENP3-202ENST00000429205 INTS9Q9NV88 658 aaKnown RBP13.71□□□□□ -0.22
SENP3-202ENST00000429205 SELENONQ9NZV5 590 aa13.71□□□□□ -0.22
SENP3-202ENST00000429205 WHRNQ9P202 907 aa13.71□□□□□ -0.22
SENP3-202ENST00000429205 APOBEC2Q9Y235 224 aaKnown RBP13.71□□□□□ -0.22
SENP3-202ENST00000429205 PRG3Q9Y2Y8 225 aaPredicted RBP13.71□□□□□ -0.22
SENP3-202ENST00000429205 PITPNM1O00562 1244 aa13.7□□□□□ -0.22
SENP3-202ENST00000429205 SNX3O60493 162 aa13.7□□□□□ -0.22
SENP3-202ENST00000429205 NUDT17P0C025 328 aa13.7□□□□□ -0.22
SENP3-202ENST00000429205 ATF2P15336 505 aa13.7□□□□□ -0.22
SENP3-202ENST00000429205 CRABP2P29373 138 aa13.7□□□□□ -0.22
SENP3-202ENST00000429205 OR1G1P47890 313 aa13.7□□□□□ -0.22
SENP3-202ENST00000429205 RXRGP48443 463 aa13.7□□□□□ -0.22
SENP3-202ENST00000429205 PITX1P78337 314 aaPredicted RBP13.7□□□□□ -0.22
SENP3-202ENST00000429205 KRT81Q14533 505 aa13.7□□□□□ -0.22
SENP3-202ENST00000429205 DCAF6Q58WW2 860 aa13.7□□□□□ -0.22
SENP3-202ENST00000429205 TJAP1Q5JTD0 557 aa13.7□□□□□ -0.22
SENP3-202ENST00000429205 CTU1Q7Z7A3 348 aaKnown RBP13.7□□□□□ -0.22
SENP3-202ENST00000429205 HERVK_113Q902F9 699 aa13.7□□□□□ -0.22
SENP3-202ENST00000429205 ARHGEF2Q92974 986 aaKnown RBP13.7□□□□□ -0.22
SENP3-202ENST00000429205 INTS12Q96CB8 462 aaKnown RBP13.7□□□□□ -0.22
SENP3-202ENST00000429205 SCLYQ96I15 445 aa13.7□□□□□ -0.22
SENP3-202ENST00000429205 RBM14Q96PK6 669 aaKnown RBP13.7□□□□□ -0.22
SENP3-202ENST00000429205 MAGEB5Q9BZ81 275 aa13.7□□□□□ -0.22
SENP3-202ENST00000429205 LRMDAQ9H2I8 198 aa13.7□□□□□ -0.22
SENP3-202ENST00000429205 GMIPQ9P107 970 aa13.7□□□□□ -0.22
SENP3-202ENST00000429205 TMA7Q9Y2S6 64 aaKnown RBP13.7□□□□□ -0.22
SENP3-202ENST00000429205 HHLA1C9JL84 531 aa13.7□□□□□ -0.22
SENP3-202ENST00000429205 MDM4O15151 490 aa13.7□□□□□ -0.22
SENP3-202ENST00000429205 MAGEB3O15480 346 aa13.7□□□□□ -0.22
SENP3-202ENST00000429205 DAB1O75553 588 aa13.7□□□□□ -0.22
SENP3-202ENST00000429205 CHEK2O96017 543 aa13.7□□□□□ -0.22
SENP3-202ENST00000429205 ZSCAN5DPP0CG00 497 aa13.7□□□□□ -0.22
SENP3-202ENST00000429205 SFTPCP11686 197 aa13.7□□□□□ -0.22
SENP3-202ENST00000429205 ETS1P14921 441 aa13.7□□□□□ -0.22
SENP3-202ENST00000429205 ITIH2P19823 946 aa13.7□□□□□ -0.22
SENP3-202ENST00000429205 GATMP50440 423 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms