RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 RBM20Q5T481 1227 aaKnown RBP8.51□□□□□ -1.05
CD44-208ENST00000428726 CD300LGQ6UXG3 332 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 PIM3Q86V86 326 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 ATPAF2Q8N5M1 289 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 MAPK15Q8TD08 544 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 MAGEC3Q8TD91 643 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 USP13Q92995 863 aaPredicted RBP8.51□□□□□ -1.05
CD44-208ENST00000428726 LRRC39Q96DD0 335 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 BFARQ9NZS9 450 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 DOCK6Q96HP0 2047 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 MANSC4A6NHS7 340 aaPredicted RBP8.51□□□□□ -1.05
CD44-208ENST00000428726 LRRC14BA6NHZ5 514 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 GPR182O15218 404 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 GCATO75600 419 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 HLA-DQB2P05538 268 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 ODC1P11926 461 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 WARSP23381 471 aaKnown RBP8.51□□□□□ -1.05
CD44-208ENST00000428726 CCND1P24385 295 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 NEK3P51956 506 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 CDH13P55290 713 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 CSHL1Q14406 222 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 HABP4Q5JVS0 413 aaKnown RBP8.51□□□□□ -1.05
CD44-208ENST00000428726 ARMC3Q5W041 872 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 TAF2Q6P1X5 1199 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 CNSTQ6PJW8 725 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 BHLHA9Q7RTU4 235 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 SERINC5Q86VE9 423 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 KCNMB4Q86W47 210 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 CFAP61Q8NHU2 1237 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 RPRD1AQ96P16 312 aaPredicted RBP8.51□□□□□ -1.05
CD44-208ENST00000428726 HBEGFQ99075 208 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 KATNAL1Q9BW62 490 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 TAS2R1Q9NYW7 299 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 RUVBL2Q9Y230 463 aaKnown RBP8.51□□□□□ -1.05
CD44-208ENST00000428726 STX16-NPEPL1H3BU86 382 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 PPP1R12AO14974 1030 aaPredicted RBP8.51□□□□□ -1.05
CD44-208ENST00000428726 PEX11AO75192 247 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 DAB1O75553 588 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 DCTN3O75935 186 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 C2P06681 752 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 POLBP06746 335 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 GSTA2P09210 222 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 CKBP12277 381 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 ALADP13716 330 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 ARL1P40616 181 aaPredicted RBP8.51□□□□□ -1.05
CD44-208ENST00000428726 GARSP41250 739 aaKnown RBP8.51□□□□□ -1.05
CD44-208ENST00000428726 SLC1A6P48664 564 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 ACLYP53396 1101 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 FCGRTP55899 365 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 POLE2P56282 527 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 RPS24P62847 133 aaKnown RBP8.51□□□□□ -1.05
CD44-208ENST00000428726 PLIN5Q00G26 463 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 TSPY1Q01534 308 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 RIPK1Q13546 671 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 DPYSQ14117 519 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 PRKD1Q15139 912 aaPredicted RBP8.51□□□□□ -1.05
CD44-208ENST00000428726 ARL13BQ3SXY8 428 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 ANKRD20A4Q4UJ75 823 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 XKR4Q5GH76 650 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 INTS6LQ5JSJ4 861 aaKnown RBP8.51□□□□□ -1.05
CD44-208ENST00000428726 LRRC73Q5JTD7 316 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 ZNF470Q6ECI4 717 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 TMEM154Q6P9G4 183 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 SCIMPQ6UWF3 145 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 GLB1LQ6UWU2 654 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 SH2D5Q6ZV89 423 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 STRADAQ7RTN6 431 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 CRLF3Q8IUI8 442 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 CEP97Q8IW35 865 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 TOP6BLQ8N6T0 577 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 PYDC1Q8WXC3 89 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 LINC01599Q8WXQ3 324 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 IGSF8Q969P0 613 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 NXNL1Q96CM4 212 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 HMCESQ96FZ2 354 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 OLFM3Q96PB7 478 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 EPAS1Q99814 870 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 XAB2Q9HCS7 855 aaKnown RBP8.51□□□□□ -1.05
CD44-208ENST00000428726 SARS2Q9NP81 518 aaKnown RBP8.51□□□□□ -1.05
CD44-208ENST00000428726 DMAP1Q9NPF5 467 aaPredicted RBP8.51□□□□□ -1.05
CD44-208ENST00000428726 TBC1D13Q9NVG8 400 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.51□□□□□ -1.05
CD44-208ENST00000428726 PTGDR2Q9Y5Y4 395 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 HS3ST4Q9Y661 456 aa8.51□□□□□ -1.05
CD44-208ENST00000428726 PPP6CO00743 305 aa8.5□□□□□ -1.05
CD44-208ENST00000428726 AIM2O14862 343 aa8.5□□□□□ -1.05
CD44-208ENST00000428726 SEPT4O43236 478 aa8.5□□□□□ -1.05
CD44-208ENST00000428726 SMIM24O75264 130 aa8.5□□□□□ -1.05
CD44-208ENST00000428726 ATP5HO75947 161 aa8.5□□□□□ -1.05
CD44-208ENST00000428726 AHSGP02765 367 aa8.5□□□□□ -1.05
CD44-208ENST00000428726 GABRB3P28472 473 aa8.5□□□□□ -1.05
CD44-208ENST00000428726 GKP32189 559 aa8.5□□□□□ -1.05
CD44-208ENST00000428726 LHX1P48742 406 aa8.5□□□□□ -1.05
CD44-208ENST00000428726 LGSNQ5TDP6 509 aa8.5□□□□□ -1.05
CD44-208ENST00000428726 RASIP1Q5U651 963 aa8.5□□□□□ -1.05
CD44-208ENST00000428726 RNF19BQ6ZMZ0 732 aa8.5□□□□□ -1.05
CD44-208ENST00000428726 ASRGL1Q7L266 308 aa8.5□□□□□ -1.05
CD44-208ENST00000428726 RBM15BQ8NDT2 890 aaKnown RBP8.5□□□□□ -1.05
CD44-208ENST00000428726 OR7D4Q8NG98 312 aa8.5□□□□□ -1.05
CD44-208ENST00000428726 OR52K2Q8NGK3 314 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms