RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 NPNTQ6UXI9 565 aa14.83□□□□□ -0.03
SGCE-204ENST00000428696 PRR23BQ6ZRT6 265 aa14.83□□□□□ -0.03
SGCE-204ENST00000428696 B4GALNT4Q76KP1 1039 aa14.83□□□□□ -0.03
SGCE-204ENST00000428696 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.83□□□□□ -0.03
SGCE-204ENST00000428696 PAF1Q8N7H5 531 aa14.83□□□□□ -0.03
SGCE-204ENST00000428696 FRS2Q8WU20 508 aa14.83□□□□□ -0.03
SGCE-204ENST00000428696 OR8D1Q8WZ84 308 aa14.83□□□□□ -0.03
SGCE-204ENST00000428696 HAUS1Q96CS2 278 aa14.83□□□□□ -0.03
SGCE-204ENST00000428696 FAM126AQ9BYI3 521 aaPredicted RBP14.83□□□□□ -0.03
SGCE-204ENST00000428696 IRF2BPLQ9H1B7 796 aa14.83□□□□□ -0.03
SGCE-204ENST00000428696 SAE1Q9UBE0 346 aaPredicted RBP14.83□□□□□ -0.03
SGCE-204ENST00000428696 CYP8B1Q9UNU6 501 aa14.83□□□□□ -0.03
SGCE-204ENST00000428696 MIF4GDA9UHW6 222 aaKnown RBP14.83□□□□□ -0.04
SGCE-204ENST00000428696 KRIT1O00522 736 aa14.83□□□□□ -0.04
SGCE-204ENST00000428696 PRAMEF11O60813 436 aa14.83□□□□□ -0.04
SGCE-204ENST00000428696 TMCC1O94876 653 aa14.83□□□□□ -0.04
SGCE-204ENST00000428696 CTNNA2P26232 953 aa14.83□□□□□ -0.04
SGCE-204ENST00000428696 CDKN2BP42772 138 aa14.83□□□□□ -0.04
SGCE-204ENST00000428696 CLCN6P51797 869 aa14.83□□□□□ -0.04
SGCE-204ENST00000428696 COPAP53621 1224 aa14.83□□□□□ -0.04
SGCE-204ENST00000428696 RPS14P62263 151 aaKnown RBP14.83□□□□□ -0.04
SGCE-204ENST00000428696 IL10RBQ08334 325 aa14.83□□□□□ -0.04
SGCE-204ENST00000428696 PAFAH1B3Q15102 231 aaKnown RBP14.83□□□□□ -0.04
SGCE-204ENST00000428696 RPS6KA1Q15418 735 aa14.83□□□□□ -0.04
SGCE-204ENST00000428696 LPAL2Q16609 132 aa14.83□□□□□ -0.04
SGCE-204ENST00000428696 CARD16Q5EG05 197 aa14.83□□□□□ -0.04
SGCE-204ENST00000428696 ARSIQ5FYB1 569 aa14.83□□□□□ -0.04
SGCE-204ENST00000428696 ATXN7L2Q5T6C5 722 aaPredicted RBP14.83□□□□□ -0.04
SGCE-204ENST00000428696 AFMIDQ63HM1 303 aa14.83□□□□□ -0.04
SGCE-204ENST00000428696 ZNF776Q68DI1 518 aaPredicted RBP14.83□□□□□ -0.04
SGCE-204ENST00000428696 AADACL2Q6P093 401 aa14.83□□□□□ -0.04
SGCE-204ENST00000428696 ZC3H14Q6PJT7 736 aaKnown RBP14.83□□□□□ -0.04
SGCE-204ENST00000428696 DSG4Q86SJ6 1040 aa14.83□□□□□ -0.04
SGCE-204ENST00000428696 WDR5BQ86VZ2 330 aa14.83□□□□□ -0.04
SGCE-204ENST00000428696 FAM160A2Q8N612 972 aaPredicted RBP14.83□□□□□ -0.04
SGCE-204ENST00000428696 DEFB119Q8N690 84 aa14.83□□□□□ -0.04
SGCE-204ENST00000428696 PLD5Q8N7P1 536 aa14.83□□□□□ -0.04
SGCE-204ENST00000428696 GRIN3AQ8TCU5 1115 aa14.83□□□□□ -0.04
SGCE-204ENST00000428696 ALG3Q92685 438 aa14.83□□□□□ -0.04
SGCE-204ENST00000428696 EXOC2Q96KP1 924 aa14.83□□□□□ -0.04
SGCE-204ENST00000428696 FAM129BQ96TA1 746 aa14.83□□□□□ -0.04
SGCE-204ENST00000428696 OMDQ99983 421 aa14.83□□□□□ -0.04
SGCE-204ENST00000428696 EBF1Q9UH73 591 aa14.83□□□□□ -0.04
SGCE-204ENST00000428696 PYCARDQ9ULZ3 195 aa14.83□□□□□ -0.04
SGCE-204ENST00000428696 KPNA3O00505 521 aaPredicted RBP14.82□□□□□ -0.04
SGCE-204ENST00000428696 HRO43593 1189 aa14.82□□□□□ -0.04
SGCE-204ENST00000428696 RPP40O75818 363 aaKnown RBP14.82□□□□□ -0.04
SGCE-204ENST00000428696 PYGMP11217 842 aa14.82□□□□□ -0.04
SGCE-204ENST00000428696 TDGF1P13385 188 aa14.82□□□□□ -0.04
SGCE-204ENST00000428696 MX2P20592 715 aa14.82□□□□□ -0.04
SGCE-204ENST00000428696 HOXA6P31267 233 aa14.82□□□□□ -0.04
SGCE-204ENST00000428696 CHRNA3P32297 505 aa14.82□□□□□ -0.04
SGCE-204ENST00000428696 SLC8A1P32418 973 aa14.82□□□□□ -0.04
SGCE-204ENST00000428696 PEX5P50542 639 aa14.82□□□□□ -0.04
SGCE-204ENST00000428696 ITKQ08881 620 aa14.82□□□□□ -0.04
SGCE-204ENST00000428696 AP1B1Q10567 949 aa14.82□□□□□ -0.04
SGCE-204ENST00000428696 SLC10A2Q12908 348 aaPredicted RBP14.82□□□□□ -0.04
SGCE-204ENST00000428696 SIM2Q14190 667 aaPredicted RBP14.82□□□□□ -0.04
SGCE-204ENST00000428696 ELAVL3Q14576 367 aaKnown RBP14.82□□□□□ -0.04
SGCE-204ENST00000428696 CYTH1Q15438 398 aa14.82□□□□□ -0.04
SGCE-204ENST00000428696 CST6Q15828 149 aa14.82□□□□□ -0.04
SGCE-204ENST00000428696 DPY19L3Q6ZPD9 716 aa14.82□□□□□ -0.04
SGCE-204ENST00000428696 PCDH20Q8N6Y1 951 aaKnown RBP14.82□□□□□ -0.04
SGCE-204ENST00000428696 FRMD1Q8N878 549 aa14.82□□□□□ -0.04
SGCE-204ENST00000428696 CHST14Q8NCH0 376 aa14.82□□□□□ -0.04
SGCE-204ENST00000428696 OR2A12Q8NGT7 310 aa14.82□□□□□ -0.04
SGCE-204ENST00000428696 P3H4Q92791 437 aa14.82□□□□□ -0.04
SGCE-204ENST00000428696 FAF2Q96CS3 445 aa14.82□□□□□ -0.04
SGCE-204ENST00000428696 SPACA7Q96KW9 195 aa14.82□□□□□ -0.04
SGCE-204ENST00000428696 CINPQ9BW66 212 aaPredicted RBP14.82□□□□□ -0.04
SGCE-204ENST00000428696 CEP44Q9C0F1 390 aa14.82□□□□□ -0.04
SGCE-204ENST00000428696 RSPH9Q9H1X1 276 aaPredicted RBP14.82□□□□□ -0.04
SGCE-204ENST00000428696 KCNH6Q9H252 994 aa14.82□□□□□ -0.04
SGCE-204ENST00000428696 ZDHHC6Q9H6R6 413 aa14.82□□□□□ -0.04
SGCE-204ENST00000428696 SEPT10Q9P0V9 454 aa14.82□□□□□ -0.04
SGCE-204ENST00000428696 NCKAP1Q9Y2A7 1128 aa14.82□□□□□ -0.04
SGCE-204ENST00000428696 TTLL3Q9Y4R7 772 aa14.82□□□□□ -0.04
SGCE-204ENST00000428696 PCDHGA2Q9Y5H1 932 aa14.82□□□□□ -0.04
SGCE-204ENST00000428696 KMT2EQ8IZD2 1858 aa14.81□□□□□ -0.04
SGCE-204ENST00000428696 FAM47DPA6NHR8 397 aa14.81□□□□□ -0.04
SGCE-204ENST00000428696 MID1O15344 667 aa14.81□□□□□ -0.04
SGCE-204ENST00000428696 MAFKO60675 156 aa14.81□□□□□ -0.04
SGCE-204ENST00000428696 RNASEH2AO75792 299 aaKnown RBP14.81□□□□□ -0.04
SGCE-204ENST00000428696 CD160O95971 181 aa14.81□□□□□ -0.04
SGCE-204ENST00000428696 GKP32189 559 aa14.81□□□□□ -0.04
SGCE-204ENST00000428696 SNRPD1P62314 119 aaKnown RBP14.81□□□□□ -0.04
SGCE-204ENST00000428696 BYSLQ13895 437 aaKnown RBP14.81□□□□□ -0.04
SGCE-204ENST00000428696 ZNF235Q14590 738 aa14.81□□□□□ -0.04
SGCE-204ENST00000428696 LBRQ14739 615 aaKnown RBP14.81□□□□□ -0.04
SGCE-204ENST00000428696 ZNF569Q5MCW4 686 aa14.81□□□□□ -0.04
SGCE-204ENST00000428696 ZNF662Q6ZS27 426 aa14.81□□□□□ -0.04
SGCE-204ENST00000428696 METTL3Q86U44 580 aaKnown RBP14.81□□□□□ -0.04
SGCE-204ENST00000428696 RASSF3Q86WH2 238 aa14.81□□□□□ -0.04
SGCE-204ENST00000428696 BBS5Q8N3I7 341 aa14.81□□□□□ -0.04
SGCE-204ENST00000428696 HDDC3Q8N4P3 179 aa14.81□□□□□ -0.04
SGCE-204ENST00000428696 TSEN2Q8NCE0 465 aaKnown RBP14.81□□□□□ -0.04
SGCE-204ENST00000428696 TRIM58Q8NG06 486 aa14.81□□□□□ -0.04
SGCE-204ENST00000428696 OSBPL8Q9BZF1 889 aa14.81□□□□□ -0.04
SGCE-204ENST00000428696 FBRSQ9HAH7 460 aa14.81□□□□□ -0.04
SGCE-204ENST00000428696 CD93Q9NPY3 652 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 179 ms