RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 DGKZQ13574 1117 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 CBFBQ13951 182 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 CCNIQ14094 377 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 TAB1Q15750 504 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 FAM187BQ17R55 369 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 SCARA3Q6AZY7 606 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 KLHL17Q6TDP4 642 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 PROSER1Q86XN7 944 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 ZNF354BQ96LW1 612 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 CORO1BQ9BR76 489 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 PDGFDQ9GZP0 370 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-208ENST00000428599 ING3Q9NXR8 418 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 DNMT3LQ9UJW3 386 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 GSAPA4D1B5 854 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 EFCAB10A6NFE3 127 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 AKAP3O75969 853 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 CCNDBP1O95273 360 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 TPH1P17752 444 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 TPP2P29144 1249 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-208ENST00000428599 ZNF268Q14587 947 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-208ENST00000428599 LYPLAL1Q5VWZ2 237 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 ZNF470Q6ECI4 717 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 DHFR2Q86XF0 187 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 KYQ8NBH2 561 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 HTR3CQ8WXA8 447 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 CATSPER2Q96P56 530 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 HGH1Q9BTY7 390 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 RIBC2Q9H4K1 309 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 BAZ2BQ9UIF8 2168 aaKnown RBP9.06□□□□□ -0.96
CTNND1-208ENST00000428599 H3BNH8 94 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 EML1O00423 815 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 UBA1P22314 1058 aaKnown RBP9.06□□□□□ -0.96
CTNND1-208ENST00000428599 RPL3P39023 403 aaKnown RBP9.06□□□□□ -0.96
CTNND1-208ENST00000428599 PRKAG1P54619 331 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 MYBPC1Q00872 1141 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 OASLQ15646 514 aaKnown RBP9.06□□□□□ -0.96
CTNND1-208ENST00000428599 TBC1D25Q3MII6 688 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 ZCWPW2Q504Y3 356 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 PRAMEF19Q5SWL8 479 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 HECTD3Q5T447 861 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 EMC1Q8N766 993 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 VAT1Q99536 393 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 ADAM2Q99965 735 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 PABPC3Q9H361 631 aaKnown RBP9.06□□□□□ -0.96
CTNND1-208ENST00000428599 KCNF1Q9H3M0 494 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 DLGAP2Q9P1A6 1054 aa9.06□□□□□ -0.96
CTNND1-208ENST00000428599 C15orf38-AP3S2A0A0A6YYH1 394 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 GP5P40197 560 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 CRATP43155 626 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 C1QBPQ07021 282 aaKnown RBP9.05□□□□□ -0.96
CTNND1-208ENST00000428599 NAB1Q13506 487 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 IL27RAQ6UWB1 636 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 ARPINQ7Z6K5 226 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 HEATR4Q86WZ0 1026 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 APLFQ8IW19 511 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-208ENST00000428599 FLCNQ8NFG4 579 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 FRMD6Q96NE9 622 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 UNKQ9C0B0 810 aaKnown RBP9.05□□□□□ -0.96
CTNND1-208ENST00000428599 POPDC2Q9HBU9 364 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 TCF7L2Q9NQB0 619 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 MARCH2Q9P0N8 246 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 GSTK1Q9Y2Q3 226 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 CACNB4O00305 520 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-208ENST00000428599 FGF10O15520 208 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-208ENST00000428599 MICAL2O94851 1124 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 FGF19O95750 216 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 FTH1P02794 183 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 DNTTP04053 509 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 PRG2P13727 222 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 YBX3P16989 372 aaKnown RBP eCLIP9.05□□□□□ -0.969e-12■□□□□ 9.1
CTNND1-208ENST00000428599 SP3Q02447 781 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-208ENST00000428599 TRPV3Q8NET8 790 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 MTFMTQ96DP5 389 aaKnown RBP9.05□□□□□ -0.96
CTNND1-208ENST00000428599 CRELD1Q96HD1 420 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 C6orf62Q9GZU0 229 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-208ENST00000428599 PRDM16Q9HAZ2 1276 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 RABGEF1Q9UJ41 708 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 MRPS33Q9Y291 106 aaKnown RBP9.05□□□□□ -0.96
CTNND1-208ENST00000428599 WDR27A2RRH5 827 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 DNALI1O14645 258 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-208ENST00000428599 KIF1CO43896 1103 aaKnown RBP9.05□□□□□ -0.96
CTNND1-208ENST00000428599 MAPTP10636 758 aaKnown RBP9.05□□□□□ -0.96
CTNND1-208ENST00000428599 IGFALSP35858 605 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 HSD17B3P37058 310 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 SLC1A6P48664 564 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 HK2P52789 917 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 IRF8Q02556 426 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 RBBP4Q09028 425 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 FASTKQ14296 549 aaKnown RBP9.05□□□□□ -0.96
CTNND1-208ENST00000428599 GPAT3Q53EU6 434 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-208ENST00000428599 COPS5Q92905 334 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 TMEM79Q9BSE2 394 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 ATP13A3Q9H7F0 1226 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 ZCCHC17Q9NP64 241 aaKnown RBP9.05□□□□□ -0.96
CTNND1-208ENST00000428599 INVSQ9Y283 1065 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 SLIT3O75094 1523 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 PNMA8CA0A1B0GUJ8 204 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 FKTNO75072 461 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms