RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 PPARGC1AQ9UBK2 798 aaKnown RBP9.43□□□□□ -0.9
RFX3-AS1-202ENST00000427722 CNOT8Q9UFF9 292 aaKnown RBP9.43□□□□□ -0.9
RFX3-AS1-202ENST00000427722 DNAI1Q9UI46 699 aa9.43□□□□□ -0.9
RFX3-AS1-202ENST00000427722 FZD4Q9ULV1 537 aa9.43□□□□□ -0.9
RFX3-AS1-202ENST00000427722 ABCA7Q8IZY2 2146 aa9.43□□□□□ -0.9
RFX3-AS1-202ENST00000427722 EML5Q05BV3 1969 aa9.43□□□□□ -0.9
RFX3-AS1-202ENST00000427722 LRRC72A6NJI9 287 aa9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 TM4SF5O14894 197 aa9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 SMAD6O43541 496 aaKnown RBP9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 RAMP2O60895 175 aa9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 GYPCP04921 128 aa9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 GZMAP12544 262 aa9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 GOT1P17174 413 aa9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 EPHB2P29323 1055 aa9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 DRD3P35462 400 aa9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 ACVRL1P37023 503 aa9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 ETFBP38117 255 aa9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 SERPINH1P50454 418 aaKnown RBP9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 DNA2P51530 1060 aa9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 ARF5P84085 180 aa9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 ZBED6P86452 979 aa9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 ZNF252P-AS1Q0IIN9 211 aa9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 HGSNATQ68CP4 663 aa9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 PLEKHA7Q6IQ23 1121 aa9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 PSAPL1Q6NUJ1 521 aa9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 VPS36Q86VN1 386 aa9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 NLRP14Q86W24 1093 aa9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 ZNF354CQ86Y25 554 aa9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 PARP9Q8IXQ6 854 aa9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 RTL3Q8N8U3 475 aaKnown RBP9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 OR2T34Q8NGX1 318 aa9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 GRIN3AQ8TCU5 1115 aa9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 BIRC7Q96CA5 298 aa9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 TRIM11Q96F44 468 aa9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 VCPIP1Q96JH7 1222 aa9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 CCDC114Q96M63 670 aa9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 TRIM7Q9C029 511 aa9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 NDFIP2Q9NV92 336 aa9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 TMEM248Q9NWD8 314 aa9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 SARDHQ9UL12 918 aa9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 ACTL7AQ9Y615 435 aa9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 MYO18AQ92614 2054 aaKnown RBP9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 SPTBN2O15020 2390 aa9.42□□□□□ -0.9
RFX3-AS1-202ENST00000427722 A0A1B0GVT2 93 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 KPNA3O00505 521 aaPredicted RBP9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 GIPC1O14908 333 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 MCF2LO15068 1137 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 ALOX15BO15296 676 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 OPHN1O60890 802 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 RTN2O75298 545 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 ZMPSTE24O75844 475 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 KCNK5O95279 499 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 SERPING1P05155 500 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 IGHV4-34P06331 123 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 CTSLP07711 333 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 MYBL1P10243 752 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 CD27P26842 260 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 L1CAMP32004 1257 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 RECQLP46063 649 aaPredicted RBP9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 AFF3P51826 1226 aaKnown RBP9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 GALCP54803 685 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 TPI1P60174 286 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 PPP2CBP62714 309 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 PPP2CAP67775 309 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 CNTN1Q12860 1018 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 TEAD4Q15561 434 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 FAM46CQ5VWP2 391 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 LEKR1Q6ZMV7 388 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 ADAT2Q7Z6V5 191 aaKnown RBP9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 RETREG3Q86VR2 466 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 CHST14Q8NCH0 376 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 DEFB124Q8NES8 71 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 OR2A12Q8NGT7 310 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 PIP4K2CQ8TBX8 421 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 SYN2Q92777 582 aaPredicted RBP9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 ARHGEF2Q92974 986 aaKnown RBP9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 IQCDQ96DY2 449 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 SLC6A18Q96N87 628 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 PEBP4Q96S96 227 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 TM6SF2Q9BZW4 377 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 TM9SF3Q9HD45 589 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 ADAMTS1Q9UHI8 967 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 PPM1HQ9ULR3 514 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 FZD10Q9ULW2 581 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 CAPN11Q9UMQ6 739 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 AP4E1Q9UPM8 1137 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 LUC7L2Q9Y383 392 aaKnown RBP9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 SCINQ9Y6U3 715 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 SPAG17Q6Q759 2223 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 CKAP5Q14008 2032 aa9.41□□□□□ -0.9
RFX3-AS1-202ENST00000427722 TMEM191CA6NGB0 347 aa9.4□□□□□ -0.9
RFX3-AS1-202ENST00000427722 CBFA2T2O43439 604 aa9.4□□□□□ -0.9
RFX3-AS1-202ENST00000427722 PRPSAP2O60256 369 aa9.4□□□□□ -0.9
RFX3-AS1-202ENST00000427722 MIPP30301 263 aa9.4□□□□□ -0.9
RFX3-AS1-202ENST00000427722 CASP14P31944 242 aa9.4□□□□□ -0.9
RFX3-AS1-202ENST00000427722 CHRNA3P32297 505 aa9.4□□□□□ -0.9
RFX3-AS1-202ENST00000427722 CSNK1EP49674 416 aaKnown RBP9.4□□□□□ -0.9
RFX3-AS1-202ENST00000427722 AIF1P55008 147 aa9.4□□□□□ -0.9
RFX3-AS1-202ENST00000427722 BNC1Q01954 994 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms