RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 CHADO15335 359 aa11.46□□□□□ -0.57
SEC61A1-202ENST00000424880 BCL10O95999 233 aa11.46□□□□□ -0.57
SEC61A1-202ENST00000424880 TFEBP19484 476 aa11.46□□□□□ -0.57
SEC61A1-202ENST00000424880 ARL1P40616 181 aaPredicted RBP11.46□□□□□ -0.57
SEC61A1-202ENST00000424880 BCAR1P56945 870 aa11.46□□□□□ -0.57
SEC61A1-202ENST00000424880 PSME3P61289 254 aa11.46□□□□□ -0.57
SEC61A1-202ENST00000424880 GBE1Q04446 702 aa11.46□□□□□ -0.57
SEC61A1-202ENST00000424880 STRIP1Q5VSL9 837 aa11.46□□□□□ -0.57
SEC61A1-202ENST00000424880 SH3BP5LQ7L8J4 393 aa11.46□□□□□ -0.57
SEC61A1-202ENST00000424880 USP37Q86T82 979 aa11.46□□□□□ -0.57
SEC61A1-202ENST00000424880 HEATR4Q86WZ0 1026 aa11.46□□□□□ -0.57
SEC61A1-202ENST00000424880 PGAM4Q8N0Y7 254 aa11.46□□□□□ -0.57
SEC61A1-202ENST00000424880 ZDHHC15Q96MV8 337 aa11.46□□□□□ -0.57
SEC61A1-202ENST00000424880 OSBPL10Q9BXB5 764 aa11.46□□□□□ -0.57
SEC61A1-202ENST00000424880 PIF1Q9H611 641 aa11.46□□□□□ -0.57
SEC61A1-202ENST00000424880 SNX15Q9NRS6 342 aa11.46□□□□□ -0.57
SEC61A1-202ENST00000424880 SEPT10Q9P0V9 454 aa11.46□□□□□ -0.57
SEC61A1-202ENST00000424880 AGO2Q9UKV8 859 aaKnown RBP11.46□□□□□ -0.57
SEC61A1-202ENST00000424880 PRPF19Q9UMS4 504 aaKnown RBP11.46□□□□□ -0.57
SEC61A1-202ENST00000424880 DLGAP1O14490 977 aa11.46□□□□□ -0.58
SEC61A1-202ENST00000424880 CLASP2O75122 1294 aaKnown RBP11.46□□□□□ -0.58
SEC61A1-202ENST00000424880 SPAG6O75602 509 aa11.46□□□□□ -0.58
SEC61A1-202ENST00000424880 IL18RAPO95256 599 aa11.46□□□□□ -0.58
SEC61A1-202ENST00000424880 BMP10O95393 424 aa11.46□□□□□ -0.58
SEC61A1-202ENST00000424880 ATXN1P54253 815 aaKnown RBP11.46□□□□□ -0.58
SEC61A1-202ENST00000424880 SLC13A2Q13183 592 aa11.46□□□□□ -0.58
SEC61A1-202ENST00000424880 DGKZQ13574 1117 aa11.46□□□□□ -0.58
SEC61A1-202ENST00000424880 TRIM25Q14258 630 aaKnown RBP11.46□□□□□ -0.58
SEC61A1-202ENST00000424880 ZNF460Q14592 562 aa11.46□□□□□ -0.58
SEC61A1-202ENST00000424880 NOMO1Q15155 1222 aa11.46□□□□□ -0.58
SEC61A1-202ENST00000424880 DGKDQ16760 1214 aa11.46□□□□□ -0.58
SEC61A1-202ENST00000424880 PPP1R3AQ16821 1122 aa11.46□□□□□ -0.58
SEC61A1-202ENST00000424880 INAVAQ3KP66 663 aa11.46□□□□□ -0.58
SEC61A1-202ENST00000424880 FAM47CQ5HY64 1035 aa11.46□□□□□ -0.58
SEC61A1-202ENST00000424880 C15orf39Q6ZRI6 1047 aa11.46□□□□□ -0.58
SEC61A1-202ENST00000424880 SPPL2CQ8IUH8 684 aa11.46□□□□□ -0.58
SEC61A1-202ENST00000424880 DCLK2Q8N568 766 aa11.46□□□□□ -0.58
SEC61A1-202ENST00000424880 PLD5Q8N7P1 536 aa11.46□□□□□ -0.58
SEC61A1-202ENST00000424880 PCYOX1LQ8NBM8 494 aa11.46□□□□□ -0.58
SEC61A1-202ENST00000424880 ANKK1Q8NFD2 765 aa11.46□□□□□ -0.58
SEC61A1-202ENST00000424880 MAGEE2Q8TD90 523 aaPredicted RBP11.46□□□□□ -0.58
SEC61A1-202ENST00000424880 CEP295NLQ96MC4 621 aa11.46□□□□□ -0.58
SEC61A1-202ENST00000424880 CTRCQ99895 268 aa11.46□□□□□ -0.58
SEC61A1-202ENST00000424880 SGIP1Q9BQI5 828 aa11.46□□□□□ -0.58
SEC61A1-202ENST00000424880 ADI1Q9BV57 179 aa11.46□□□□□ -0.58
SEC61A1-202ENST00000424880 ZNF341Q9BYN7 854 aa11.46□□□□□ -0.58
SEC61A1-202ENST00000424880 FAM198AQ9UFP1 575 aa11.46□□□□□ -0.58
SEC61A1-202ENST00000424880 GPSM3Q9Y4H4 160 aa11.46□□□□□ -0.58
SEC61A1-202ENST00000424880 CDY2AQ9Y6F7 541 aa11.46□□□□□ -0.58
SEC61A1-202ENST00000424880 CDY1Q9Y6F8 540 aa11.46□□□□□ -0.58
SEC61A1-202ENST00000424880 GUCY1B2O75343 617 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 CCNE2O96020 404 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 MAPTP10636 758 aaKnown RBP11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 HNRNPLP14866 589 aaKnown RBP eCLIP11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 CCNA2P20248 432 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 GRK2P25098 689 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 HPCAL1P37235 193 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 PRPSAP1Q14558 356 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 MOGQ16653 247 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 FAM102AQ5T9C2 384 aaPredicted RBP11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 SEL1L3Q68CR1 1132 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 EEPD1Q7L9B9 569 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 FAM35AQ86V20 835 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 PEX5LQ8IYB4 626 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 EXOC8Q8IYI6 725 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 KCTD17Q8N5Z5 321 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 ZC3H15Q8WU90 426 aaKnown RBP11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 ALPK1Q96QP1 1244 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 OLFM1Q99784 485 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 TDRD1Q9BXT4 1180 aaKnown RBP11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 ANKRD60Q9BZ19 345 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 PARVBQ9HBI1 364 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 DKK3Q9UBP4 350 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 NUDT5Q9UKK9 219 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 CNOT11Q9UKZ1 510 aaKnown RBP11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 OAZ3Q9UMX2 235 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 B3GNT3Q9Y2A9 372 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 PCDHB12Q9Y5F1 795 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 DNAH12Q6ZR08 3092 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 TRIM64BA6NI03 449 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 TRDMT1O14717 391 aaKnown RBP11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 AURKAO14965 403 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 PHGDHO43175 533 aaKnown RBP11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 KRT19P08727 400 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 EEF1DP29692 281 aaKnown RBP11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 GRIA4P48058 902 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 HARS2P49590 506 aaKnown RBP11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 MTMR1Q13613 665 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 OTUD3Q5T2D3 398 aaPredicted RBP11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 PNPLA1Q8N8W4 532 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 RP9Q8TA86 221 aaKnown RBP11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 FBXL18Q96ME1 805 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 VTA1Q9NP79 307 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 PNPLA8Q9NP80 782 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 PAK5Q9P286 719 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 FBXO40Q9UH90 709 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 PCDHGA7Q9Y5G6 932 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 ZNF646O15015 1829 aaPredicted RBP11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 LRRIQ4A6NIV6 560 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 TRIM64CA6NLI5 447 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms