RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 MATN3O15232 486 aa13.69□□□□□ -0.22
PRPF39-202ENST00000424478 TMCC1O94876 653 aa13.69□□□□□ -0.22
PRPF39-202ENST00000424478 ADCY8P40145 1251 aa13.69□□□□□ -0.22
PRPF39-202ENST00000424478 POM121L1PQ3SYA9 428 aa13.69□□□□□ -0.22
PRPF39-202ENST00000424478 PLCD3Q8N3E9 789 aa13.69□□□□□ -0.22
PRPF39-202ENST00000424478 GDAP1L1Q96MZ0 367 aa13.69□□□□□ -0.22
PRPF39-202ENST00000424478 BRD8Q9H0E9 1235 aa13.69□□□□□ -0.22
PRPF39-202ENST00000424478 RAB6BQ9NRW1 208 aa13.69□□□□□ -0.22
PRPF39-202ENST00000424478 TTC34A8MYJ7 566 aa13.68□□□□□ -0.22
PRPF39-202ENST00000424478 SPECC1L-ADORA2AF8WAN1 911 aa13.68□□□□□ -0.22
PRPF39-202ENST00000424478 NEBLO76041 1014 aa13.68□□□□□ -0.22
PRPF39-202ENST00000424478 CTHP32929 405 aa13.68□□□□□ -0.22
PRPF39-202ENST00000424478 GRIA1P42261 906 aa13.68□□□□□ -0.22
PRPF39-202ENST00000424478 LBRQ14739 615 aaKnown RBP13.68□□□□□ -0.22
PRPF39-202ENST00000424478 CYTH1Q15438 398 aa13.68□□□□□ -0.22
PRPF39-202ENST00000424478 C2orf27AQ580R0 203 aa13.68□□□□□ -0.22
PRPF39-202ENST00000424478 DGKKQ5KSL6 1271 aa13.68□□□□□ -0.22
PRPF39-202ENST00000424478 ACBD5Q5T8D3 534 aaPredicted RBP13.68□□□□□ -0.22
PRPF39-202ENST00000424478 MARC1Q5VT66 337 aa13.68□□□□□ -0.22
PRPF39-202ENST00000424478 RNF43Q68DV7 783 aa13.68□□□□□ -0.22
PRPF39-202ENST00000424478 GRAMD4Q6IC98 578 aa13.68□□□□□ -0.22
PRPF39-202ENST00000424478 SMIM14Q96QK8 99 aa13.68□□□□□ -0.22
PRPF39-202ENST00000424478 RBM15Q96T37 977 aaKnown RBP eCLIP13.68□□□□□ -0.22
PRPF39-202ENST00000424478 GORASP1Q9BQQ3 440 aa13.68□□□□□ -0.22
PRPF39-202ENST00000424478 TMEM51Q9NW97 253 aa13.68□□□□□ -0.22
PRPF39-202ENST00000424478 UBA2Q9UBT2 640 aaPredicted RBP13.68□□□□□ -0.22
PRPF39-202ENST00000424478 NDRG2Q9UN36 371 aaKnown RBP13.68□□□□□ -0.22
PRPF39-202ENST00000424478 EFCAB8A8MWE9 144 aa13.68□□□□□ -0.22
PRPF39-202ENST00000424478 INSIG1O15503 277 aa13.68□□□□□ -0.22
PRPF39-202ENST00000424478 KAT7O95251 611 aa13.68□□□□□ -0.22
PRPF39-202ENST00000424478 MYBL2P10244 700 aa13.68□□□□□ -0.22
PRPF39-202ENST00000424478 CCNCP24863 283 aa13.68□□□□□ -0.22
PRPF39-202ENST00000424478 XRCC4Q13426 336 aa13.68□□□□□ -0.22
PRPF39-202ENST00000424478 PTPRRQ15256 657 aa13.68□□□□□ -0.22
PRPF39-202ENST00000424478 PCSK7Q16549 785 aa13.68□□□□□ -0.22
PRPF39-202ENST00000424478 HP1BP3Q5SSJ5 553 aaPredicted RBP13.68□□□□□ -0.22
PRPF39-202ENST00000424478 BZW1Q7L1Q6 419 aaKnown RBP13.68□□□□□ -0.22
PRPF39-202ENST00000424478 CASKIN2Q8WXE0 1202 aa13.68□□□□□ -0.22
PRPF39-202ENST00000424478 UBXN4Q92575 508 aa13.68□□□□□ -0.22
PRPF39-202ENST00000424478 NEUROG2Q9H2A3 272 aa13.68□□□□□ -0.22
PRPF39-202ENST00000424478 CACNA2D2Q9NY47 1150 aa13.68□□□□□ -0.22
PRPF39-202ENST00000424478 MMP13P45452 471 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 IL10RBQ08334 325 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 NR1H3Q13133 447 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 TDGQ13569 410 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 DRICH1Q6PGQ1 229 aaPredicted RBP13.67□□□□□ -0.22
PRPF39-202ENST00000424478 ARHGEF18Q6ZSZ5 1173 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 Q6ZVU0 165 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 ADHFE1Q8IWW8 467 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 PHTF2Q8N3S3 785 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 TERB1Q8NA31 727 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 DCAF4L2Q8NA75 395 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 CCDC26Q8TAB7 109 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 C2orf49Q9BVC5 232 aaPredicted RBP13.67□□□□□ -0.22
PRPF39-202ENST00000424478 ETNK1Q9HBU6 452 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 HOMER3Q9NSC5 361 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 MUTYHQ9UIF7 546 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 FBXO10Q9UK96 956 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 DRG1Q9Y295 367 aaKnown RBP13.67□□□□□ -0.22
PRPF39-202ENST00000424478 A0A0U1RQS6 177 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 SHISA7A6NL88 538 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 BANF1O75531 89 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 GAS8O95995 478 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 EGFP01133 1207 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 POLR2EP19388 210 aaKnown RBP13.67□□□□□ -0.22
PRPF39-202ENST00000424478 CARSP49589 748 aaKnown RBP13.67□□□□□ -0.22
PRPF39-202ENST00000424478 SCNN1BP51168 640 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 NIPAL4Q0D2K0 466 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 ZNF235Q14590 738 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 PTPRNQ16849 979 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 TEX44Q53QW1 395 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 EGFLAMQ63HQ2 1017 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 RYBPQ8N488 228 aaPredicted RBP13.67□□□□□ -0.22
PRPF39-202ENST00000424478 TSGA13Q96PP4 275 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 RSPH14Q9UHP6 348 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 KIAA1549LQ6ZVL6 1849 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 A0A0A0MRY4 1105 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 NCAM2O15394 837 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 PMPCBO75439 489 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 SRCP12931 536 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 TIE1P35590 1138 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 ECT2LQ008S8 904 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 DENND2CQ68D51 928 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 TPRG1Q6ZUI0 275 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 MICALCLQ6ZW33 695 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 OXNAD1Q96HP4 312 aaPredicted RBP13.67□□□□□ -0.22
PRPF39-202ENST00000424478 SPATA13Q96N96 652 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 IGSF9Q9P2J2 1179 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 RAD54BQ9Y620 910 aa13.67□□□□□ -0.22
PRPF39-202ENST00000424478 HACD1B0YJ81 288 aa13.66□□□□□ -0.22
PRPF39-202ENST00000424478 APRTP07741 180 aa13.66□□□□□ -0.22
PRPF39-202ENST00000424478 IVDP26440 423 aa13.66□□□□□ -0.22
PRPF39-202ENST00000424478 SEMG2Q02383 582 aa13.66□□□□□ -0.22
PRPF39-202ENST00000424478 AHI1Q8N157 1196 aa13.66□□□□□ -0.22
PRPF39-202ENST00000424478 PDCD7Q8N8D1 485 aaKnown RBP13.66□□□□□ -0.22
PRPF39-202ENST00000424478 MYO19Q96H55 970 aa13.66□□□□□ -0.22
PRPF39-202ENST00000424478 SEMA3CQ99985 751 aa13.66□□□□□ -0.22
PRPF39-202ENST00000424478 P2RY13Q9BPV8 354 aa13.66□□□□□ -0.22
PRPF39-202ENST00000424478 ERP44Q9BS26 406 aa13.66□□□□□ -0.22
PRPF39-202ENST00000424478 CINPQ9BW66 212 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms