RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 CSTF2P33240 577 aaKnown RBP eCLIP6.49□□□□□ -1.37
SDCBP-203ENST00000424270 MAN1A1P33908 653 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 UBA7P41226 1012 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 ZNF131P52739 623 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 RNASE9P60153 205 aaKnown RBP6.49□□□□□ -1.37
SDCBP-203ENST00000424270 KCNA1Q09470 495 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 ERV3-1Q14264 604 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 MCM6Q14566 821 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 ARID5BQ14865 1188 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 C16orf72Q14CZ0 275 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 ELOCQ15369 112 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 ARHGAP44Q17R89 818 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 C14orf28Q4W4Y0 310 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 PRR30Q53SZ7 412 aaPredicted RBP6.49□□□□□ -1.37
SDCBP-203ENST00000424270 ZRANB3Q5FWF4 1079 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 DCAF12Q5T6F0 453 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 L1TD1Q5T7N2 865 aaKnown RBP6.49□□□□□ -1.37
SDCBP-203ENST00000424270 CLEC20AQ6ZU45 233 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 ZNF720Q7Z2F6 126 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 CCDC186Q7Z3E2 898 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 KIAA0907Q7Z7F0 614 aaPredicted RBP6.49□□□□□ -1.37
SDCBP-203ENST00000424270 PIM3Q86V86 326 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 GKN2Q86XP6 184 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 FAM217AQ8IXS0 508 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 C12orf29Q8N999 325 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 ZNF454Q8N9F8 522 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 KCNN1Q92952 543 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 DDX50Q9BQ39 737 aaKnown RBP6.49□□□□□ -1.37
SDCBP-203ENST00000424270 LRRC61Q9BV99 259 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 B3GNT4Q9C0J1 378 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 TCEAL2Q9H3H9 227 aaPredicted RBP6.49□□□□□ -1.37
SDCBP-203ENST00000424270 RDH14Q9HBH5 336 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 CSNK1G1Q9HCP0 422 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 CYP4F12Q9HCS2 524 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 OLA1Q9NTK5 396 aaKnown RBP6.49□□□□□ -1.37
SDCBP-203ENST00000424270 SFMBT1Q9UHJ3 866 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 KLF15Q9UIH9 416 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 SLC25A13Q9UJS0 675 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 TLK1Q9UKI8 766 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 SARDHQ9UL12 918 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 HS3ST3A1Q9Y663 406 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 KCNMB2Q9Y691 235 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 MED13Q9UHV7 2174 aa6.49□□□□□ -1.37
SDCBP-203ENST00000424270 TDRD6O60522 2096 aaKnown RBP6.48□□□□□ -1.37
SDCBP-203ENST00000424270 CDC14CA4D256 554 aa6.48□□□□□ -1.37
SDCBP-203ENST00000424270 ANKUB1A6NFN9 424 aa6.48□□□□□ -1.37
SDCBP-203ENST00000424270 NEMP1O14524 444 aa6.48□□□□□ -1.37
SDCBP-203ENST00000424270 IRAK2O43187 625 aa6.48□□□□□ -1.37
SDCBP-203ENST00000424270 ZW10O43264 779 aa6.48□□□□□ -1.37
SDCBP-203ENST00000424270 MSI1O43347 362 aaKnown RBP6.48□□□□□ -1.37
SDCBP-203ENST00000424270 JAK2O60674 1132 aa6.48□□□□□ -1.37
SDCBP-203ENST00000424270 KATNA1O75449 491 aa6.48□□□□□ -1.37
SDCBP-203ENST00000424270 HOXB4P17483 251 aaPredicted RBP6.48□□□□□ -1.37
SDCBP-203ENST00000424270 ATICP31939 592 aa6.48□□□□□ -1.37
SDCBP-203ENST00000424270 BLKP51451 505 aa6.48□□□□□ -1.37
SDCBP-203ENST00000424270 KIF11P52732 1056 aa6.48□□□□□ -1.37
SDCBP-203ENST00000424270 SLC8A3P57103 927 aa6.48□□□□□ -1.37
SDCBP-203ENST00000424270 RPS21P63220 83 aaKnown RBP6.48□□□□□ -1.37
SDCBP-203ENST00000424270 PPARDQ03181 441 aa6.48□□□□□ -1.37
SDCBP-203ENST00000424270 CENPCQ03188 943 aa6.48□□□□□ -1.37
SDCBP-203ENST00000424270 SRSF11Q05519 484 aaKnown RBP6.48□□□□□ -1.37
SDCBP-203ENST00000424270 CDK18Q07002 472 aa6.48□□□□□ -1.37
SDCBP-203ENST00000424270 ZFP36L1Q07352 338 aaKnown RBP6.48□□□□□ -1.37
SDCBP-203ENST00000424270 TRIP4Q15650 581 aaPredicted RBP6.48□□□□□ -1.37
SDCBP-203ENST00000424270 BMP2KLQ5H9B9 411 aa6.48□□□□□ -1.37
SDCBP-203ENST00000424270 EFHC2Q5JST6 749 aa6.48□□□□□ -1.37
SDCBP-203ENST00000424270 MPP7Q5T2T1 576 aa6.48□□□□□ -1.37
SDCBP-203ENST00000424270 PIK3R6Q5UE93 754 aa6.48□□□□□ -1.37
SDCBP-203ENST00000424270 CBWD2Q8IUF1 395 aa6.48□□□□□ -1.37
SDCBP-203ENST00000424270 HID1Q8IV36 788 aa6.48□□□□□ -1.37
SDCBP-203ENST00000424270 CFAP52Q8N1V2 620 aa6.48□□□□□ -1.37
SDCBP-203ENST00000424270 FSTL5Q8N475 847 aaPredicted RBP6.48□□□□□ -1.37
SDCBP-203ENST00000424270 C4orf32Q8N8J7 132 aa6.48□□□□□ -1.37
SDCBP-203ENST00000424270 FIBINQ8TAL6 211 aa6.48□□□□□ -1.37
SDCBP-203ENST00000424270 PMEPA1Q969W9 287 aa6.48□□□□□ -1.37
SDCBP-203ENST00000424270 CYFIP2Q96F07 1278 aa6.48□□□□□ -1.37
SDCBP-203ENST00000424270 BMFQ96LC9 184 aa6.48□□□□□ -1.37
SDCBP-203ENST00000424270 CCDC114Q96M63 670 aa6.48□□□□□ -1.37
SDCBP-203ENST00000424270 IPO9Q96P70 1041 aaKnown RBP6.48□□□□□ -1.37
SDCBP-203ENST00000424270 KCNK17Q96T54 332 aa6.48□□□□□ -1.37
SDCBP-203ENST00000424270 SLC17A9Q9BYT1 436 aa6.48□□□□□ -1.37
SDCBP-203ENST00000424270 FOXP1Q9H334 677 aaPredicted RBP6.48□□□□□ -1.37
SDCBP-203ENST00000424270 ST6GALNAC4Q9H4F1 302 aa6.48□□□□□ -1.37
SDCBP-203ENST00000424270 G3BP2Q9UN86 482 aaKnown RBP6.48□□□□□ -1.37
SDCBP-203ENST00000424270 POLHQ9Y253 713 aa6.48□□□□□ -1.37
SDCBP-203ENST00000424270 HBS1LQ9Y450 684 aaKnown RBP6.48□□□□□ -1.37
SDCBP-203ENST00000424270 B3GALT1Q9Y5Z6 326 aa6.48□□□□□ -1.37
SDCBP-203ENST00000424270 ZFHX3Q15911 3703 aa6.48□□□□□ -1.37
SDCBP-203ENST00000424270 ABCA2Q9BZC7 2435 aa6.48□□□□□ -1.37
SDCBP-203ENST00000424270 ADGRG4Q8IZF6 3080 aa6.48□□□□□ -1.37
SDCBP-203ENST00000424270 COL27A1Q8IZC6 1860 aaPredicted RBP6.47□□□□□ -1.37
SDCBP-203ENST00000424270 LOC101059948A0A1B0GTJ6 334 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 B4DGG1 531 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 C10orf142B7Z368 130 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 KIAA0391O15091 583 aaKnown RBP6.47□□□□□ -1.37
SDCBP-203ENST00000424270 KRT86O43790 486 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 LATS1O95835 1130 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 C8BP07358 591 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 CELA2BP08218 269 aaPredicted RBP6.47□□□□□ -1.37
SDCBP-203ENST00000424270 FGF3P11487 239 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms