RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 TUBGCP2Q9BSJ2 902 aa16.51■□□□□ 0.23
COL18A1-205ENST00000423214 ANLNQ9NQW6 1124 aa16.51■□□□□ 0.23
COL18A1-205ENST00000423214 LMBRD1Q9NUN5 540 aa16.51■□□□□ 0.23
COL18A1-205ENST00000423214 FHOD1Q9Y613 1164 aa16.51■□□□□ 0.23
COL18A1-205ENST00000423214 SMG1Q96Q15 3661 aaKnown RBP16.5■□□□□ 0.23
COL18A1-205ENST00000423214 LRRK1Q38SD2 2015 aa16.5■□□□□ 0.23
COL18A1-205ENST00000423214 FFAR2O15552 330 aa16.5■□□□□ 0.23
COL18A1-205ENST00000423214 SMAD6O43541 496 aaKnown RBP16.5■□□□□ 0.23
COL18A1-205ENST00000423214 SIGLEC6O43699 453 aa16.5■□□□□ 0.23
COL18A1-205ENST00000423214 SRGAP2O75044 1071 aa16.5■□□□□ 0.23
COL18A1-205ENST00000423214 ALPPL2P10696 532 aa16.5■□□□□ 0.23
COL18A1-205ENST00000423214 CYP11B1P15538 503 aa16.5■□□□□ 0.23
COL18A1-205ENST00000423214 GLDCP23378 1020 aa16.5■□□□□ 0.23
COL18A1-205ENST00000423214 ACP1P24666 158 aa16.5■□□□□ 0.23
COL18A1-205ENST00000423214 GABRB2P47870 512 aa16.5■□□□□ 0.23
COL18A1-205ENST00000423214 NEK3P51956 506 aa16.5■□□□□ 0.23
COL18A1-205ENST00000423214 KCNMA1Q12791 1236 aa16.5■□□□□ 0.23
COL18A1-205ENST00000423214 ZNF284Q2VY69 593 aa16.5■□□□□ 0.23
COL18A1-205ENST00000423214 PROX2Q3B8N5 592 aa16.5■□□□□ 0.23
COL18A1-205ENST00000423214 RETSATQ6NUM9 610 aa16.5■□□□□ 0.23
COL18A1-205ENST00000423214 ERN2Q76MJ5 926 aaKnown RBP16.5■□□□□ 0.23
COL18A1-205ENST00000423214 PTAR1Q7Z6K3 402 aaPredicted RBP16.5■□□□□ 0.23
COL18A1-205ENST00000423214 ZNF683Q8IZ20 524 aa16.5■□□□□ 0.23
COL18A1-205ENST00000423214 OR13H1Q8NG92 308 aa16.5■□□□□ 0.23
COL18A1-205ENST00000423214 OR7D4Q8NG98 312 aa16.5■□□□□ 0.23
COL18A1-205ENST00000423214 BAP1Q92560 729 aa16.5■□□□□ 0.23
COL18A1-205ENST00000423214 NT5C3BQ969T7 300 aa16.5■□□□□ 0.23
COL18A1-205ENST00000423214 C1orf74Q96LT6 269 aa16.5■□□□□ 0.23
COL18A1-205ENST00000423214 SPON2Q9BUD6 331 aa16.5■□□□□ 0.23
COL18A1-205ENST00000423214 NRSN2Q9GZP1 204 aa16.5■□□□□ 0.23
COL18A1-205ENST00000423214 NUP62CLQ9H1M0 184 aa16.5■□□□□ 0.23
COL18A1-205ENST00000423214 ATP13A1Q9HD20 1204 aa16.5■□□□□ 0.23
COL18A1-205ENST00000423214 TMPRSS4Q9NRS4 437 aa16.5■□□□□ 0.23
COL18A1-205ENST00000423214 CLCA2Q9UQC9 943 aa16.5■□□□□ 0.23
COL18A1-205ENST00000423214 IGLV3-10A0A075B6K4 115 aa16.49■□□□□ 0.23
COL18A1-205ENST00000423214 ILVBLA1L0T0 632 aa16.49■□□□□ 0.23
COL18A1-205ENST00000423214 DRGXA6NNA5 263 aa16.49■□□□□ 0.23
COL18A1-205ENST00000423214 A6NNZ2 444 aa16.49■□□□□ 0.23
COL18A1-205ENST00000423214 I6L893 689 aaPredicted RBP16.49■□□□□ 0.23
COL18A1-205ENST00000423214 RRP8O43159 456 aaKnown RBP16.49■□□□□ 0.23
COL18A1-205ENST00000423214 LEFTY1O75610 366 aa16.49■□□□□ 0.23
COL18A1-205ENST00000423214 ENDOD1O94919 500 aa16.49■□□□□ 0.23
COL18A1-205ENST00000423214 DGKAP23743 735 aa16.49■□□□□ 0.23
COL18A1-205ENST00000423214 FLT3P36888 993 aa16.49■□□□□ 0.23
COL18A1-205ENST00000423214 SERPINH1P50454 418 aaKnown RBP16.49■□□□□ 0.23
COL18A1-205ENST00000423214 ZNF211Q13398 564 aaPredicted RBP16.49■□□□□ 0.23
COL18A1-205ENST00000423214 ARSIQ5FYB1 569 aa16.49■□□□□ 0.23
COL18A1-205ENST00000423214 MIIPQ5JXC2 388 aa16.49■□□□□ 0.23
COL18A1-205ENST00000423214 ZNF783Q6ZMS7 281 aa16.49■□□□□ 0.23
COL18A1-205ENST00000423214 DPY19L3Q6ZPD9 716 aa16.49■□□□□ 0.23
COL18A1-205ENST00000423214 FAM131BQ86XD5 332 aa16.49■□□□□ 0.23
COL18A1-205ENST00000423214 PCDH20Q8N6Y1 951 aaKnown RBP16.49■□□□□ 0.23
COL18A1-205ENST00000423214 OR4C6Q8NH72 309 aa16.49■□□□□ 0.23
COL18A1-205ENST00000423214 CRELD1Q96HD1 420 aa16.49■□□□□ 0.23
COL18A1-205ENST00000423214 CFAP57Q96MR6 1250 aa16.49■□□□□ 0.23
COL18A1-205ENST00000423214 HDAC8Q9BY41 377 aa16.49■□□□□ 0.23
COL18A1-205ENST00000423214 ZYG11BQ9C0D3 744 aa16.49■□□□□ 0.23
COL18A1-205ENST00000423214 CEP44Q9C0F1 390 aa16.49■□□□□ 0.23
COL18A1-205ENST00000423214 KLHL11Q9NVR0 708 aa16.49■□□□□ 0.23
COL18A1-205ENST00000423214 ASXL3Q9C0F0 2248 aa16.49■□□□□ 0.23
COL18A1-205ENST00000423214 TRIM38O00635 465 aa16.48■□□□□ 0.23
COL18A1-205ENST00000423214 ADRB3P13945 408 aa16.48■□□□□ 0.23
COL18A1-205ENST00000423214 DNA2P51530 1060 aa16.48■□□□□ 0.23
COL18A1-205ENST00000423214 E2F1Q01094 437 aa16.48■□□□□ 0.23
COL18A1-205ENST00000423214 INSM1Q01101 510 aaPredicted RBP16.48■□□□□ 0.23
COL18A1-205ENST00000423214 MAPK8IP2Q13387 824 aaPredicted RBP16.48■□□□□ 0.23
COL18A1-205ENST00000423214 RTP5Q14D33 572 aa16.48■□□□□ 0.23
COL18A1-205ENST00000423214 DPCR1Q3MIW9 517 aa16.48■□□□□ 0.23
COL18A1-205ENST00000423214 C2CD6Q53TS8 623 aa16.48■□□□□ 0.23
COL18A1-205ENST00000423214 NAA35Q5VZE5 725 aa16.48■□□□□ 0.23
COL18A1-205ENST00000423214 SEL1L3Q68CR1 1132 aa16.48■□□□□ 0.23
COL18A1-205ENST00000423214 KIAA1161Q6NSJ0 714 aa16.48■□□□□ 0.23
COL18A1-205ENST00000423214 KDM7AQ6ZMT4 941 aa16.48■□□□□ 0.23
COL18A1-205ENST00000423214 GCNT7Q6ZNI0 430 aa16.48■□□□□ 0.23
COL18A1-205ENST00000423214 CLEC17AQ6ZS10 378 aa16.48■□□□□ 0.23
COL18A1-205ENST00000423214 TMC6Q7Z403 805 aa16.48■□□□□ 0.23
COL18A1-205ENST00000423214 DRC7Q8IY82 874 aa16.48■□□□□ 0.23
COL18A1-205ENST00000423214 FAM174AQ8TBP5 190 aa16.48■□□□□ 0.23
COL18A1-205ENST00000423214 HAPLN3Q96S86 360 aa16.48■□□□□ 0.23
COL18A1-205ENST00000423214 ZDHHC6Q9H6R6 413 aa16.48■□□□□ 0.23
COL18A1-205ENST00000423214 METTL5Q9NRN9 209 aaKnown RBP16.48■□□□□ 0.23
COL18A1-205ENST00000423214 EVA1BQ9NVM1 165 aa16.48■□□□□ 0.23
COL18A1-205ENST00000423214 ZFR2Q9UPR6 939 aaKnown RBP16.48■□□□□ 0.23
COL18A1-205ENST00000423214 F8VZ95 297 aa16.47■□□□□ 0.23
COL18A1-205ENST00000423214 TLX3O43711 291 aaPredicted RBP16.47■□□□□ 0.23
COL18A1-205ENST00000423214 PIAS2O75928 621 aa16.47■□□□□ 0.23
COL18A1-205ENST00000423214 MMEP08473 750 aa16.47■□□□□ 0.23
COL18A1-205ENST00000423214 UCHL3P15374 230 aa16.47■□□□□ 0.23
COL18A1-205ENST00000423214 ITGB7P26010 798 aa16.47■□□□□ 0.23
COL18A1-205ENST00000423214 ERCC5P28715 1186 aaPredicted RBP16.47■□□□□ 0.23
COL18A1-205ENST00000423214 ETFBP38117 255 aa16.47■□□□□ 0.23
COL18A1-205ENST00000423214 EIF2S3P41091 472 aaKnown RBP16.47■□□□□ 0.23
COL18A1-205ENST00000423214 CCNHP51946 323 aaPredicted RBP16.47■□□□□ 0.23
COL18A1-205ENST00000423214 CLDN2P57739 230 aa16.47■□□□□ 0.23
COL18A1-205ENST00000423214 RPS21P63220 83 aaKnown RBP16.47■□□□□ 0.23
COL18A1-205ENST00000423214 NOMO3P69849 1222 aa16.47■□□□□ 0.23
COL18A1-205ENST00000423214 ATP11AP98196 1134 aa16.47■□□□□ 0.23
COL18A1-205ENST00000423214 GNA12Q03113 381 aa16.47■□□□□ 0.23
COL18A1-205ENST00000423214 CDO1Q16878 200 aa16.47■□□□□ 0.23
COL18A1-205ENST00000423214 TMEM259Q4ZIN3 620 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms