RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 ERLEC1Q96DZ1 483 aa16■□□□□ 0.15
DDX55-203ENST00000421670 EXOC2Q96KP1 924 aa16■□□□□ 0.15
DDX55-203ENST00000421670 FRMD8P1Q9BZ68 369 aaPredicted RBP16■□□□□ 0.15
DDX55-203ENST00000421670 THAP10Q9P2Z0 257 aaPredicted RBP16■□□□□ 0.15
DDX55-203ENST00000421670 BCLAF3A2AJT9 711 aaKnown RBP15.99■□□□□ 0.15
DDX55-203ENST00000421670 FAM170BA6NMN3 283 aa15.99■□□□□ 0.15
DDX55-203ENST00000421670 TTC34A8MYJ7 566 aa15.99■□□□□ 0.15
DDX55-203ENST00000421670 PHF2O75151 1096 aa15.99■□□□□ 0.15
DDX55-203ENST00000421670 PRKCHP24723 683 aa15.99■□□□□ 0.15
DDX55-203ENST00000421670 GDF10P55107 478 aa15.99■□□□□ 0.15
DDX55-203ENST00000421670 ST8SIA6P61647 398 aa15.99■□□□□ 0.15
DDX55-203ENST00000421670 ZNF33AQ06730 810 aa15.99■□□□□ 0.15
DDX55-203ENST00000421670 ZNF235Q14590 738 aa15.99■□□□□ 0.15
DDX55-203ENST00000421670 CYP1B1Q16678 543 aa15.99■□□□□ 0.15
DDX55-203ENST00000421670 ACCSLQ4AC99 568 aa15.99■□□□□ 0.15
DDX55-203ENST00000421670 C22orf39Q6P5X5 142 aa15.99■□□□□ 0.15
DDX55-203ENST00000421670 PKN3Q6P5Z2 889 aa15.99■□□□□ 0.15
DDX55-203ENST00000421670 SERPINA13PQ6UXR4 307 aa15.99■□□□□ 0.15
DDX55-203ENST00000421670 TRIM67Q6ZTA4 783 aa15.99■□□□□ 0.15
DDX55-203ENST00000421670 C12orf50Q8NA57 414 aaPredicted RBP15.99■□□□□ 0.15
DDX55-203ENST00000421670 IL17RCQ8NAC3 791 aa15.99■□□□□ 0.15
DDX55-203ENST00000421670 TSEN2Q8NCE0 465 aaKnown RBP15.99■□□□□ 0.15
DDX55-203ENST00000421670 RPLP0P6Q8NHW5 317 aa15.99■□□□□ 0.15
DDX55-203ENST00000421670 NSMCE1Q8WV22 266 aa15.99■□□□□ 0.15
DDX55-203ENST00000421670 MAML1Q92585 1016 aa15.99■□□□□ 0.15
DDX55-203ENST00000421670 MAGOHBQ96A72 148 aaKnown RBP15.99■□□□□ 0.15
DDX55-203ENST00000421670 CCDC114Q96M63 670 aa15.99■□□□□ 0.15
DDX55-203ENST00000421670 ZNF599Q96NL3 588 aa15.99■□□□□ 0.15
DDX55-203ENST00000421670 CINPQ9BW66 212 aaPredicted RBP15.99■□□□□ 0.15
DDX55-203ENST00000421670 TM6SF2Q9BZW4 377 aa15.99■□□□□ 0.15
DDX55-203ENST00000421670 DDX47Q9H0S4 455 aaKnown RBP15.99■□□□□ 0.15
DDX55-203ENST00000421670 TNKS2Q9H2K2 1166 aa15.99■□□□□ 0.15
DDX55-203ENST00000421670 MFSD1Q9H3U5 465 aa15.99■□□□□ 0.15
DDX55-203ENST00000421670 MTG2Q9H4K7 406 aa15.99■□□□□ 0.15
DDX55-203ENST00000421670 ZNF148Q9UQR1 794 aa15.99■□□□□ 0.15
DDX55-203ENST00000421670 TTLL3Q9Y4R7 772 aa15.99■□□□□ 0.15
DDX55-203ENST00000421670 RNF103O00237 685 aa15.98■□□□□ 0.15
DDX55-203ENST00000421670 MUSKO15146 869 aa15.98■□□□□ 0.15
DDX55-203ENST00000421670 JCHAINP01591 159 aa15.98■□□□□ 0.15
DDX55-203ENST00000421670 HNRNPLP14866 589 aaKnown RBP eCLIP15.98■□□□□ 0.15
DDX55-203ENST00000421670 PTPN3P26045 913 aa15.98■□□□□ 0.15
DDX55-203ENST00000421670 NNMTP40261 264 aa15.98■□□□□ 0.15
DDX55-203ENST00000421670 MMP13P45452 471 aa15.98■□□□□ 0.15
DDX55-203ENST00000421670 IFI35P80217 286 aaPredicted RBP15.98■□□□□ 0.15
DDX55-203ENST00000421670 SLC20A2Q08357 652 aa15.98■□□□□ 0.15
DDX55-203ENST00000421670 C2orf54Q08AI8 447 aa15.98■□□□□ 0.15
DDX55-203ENST00000421670 WASHC5Q12768 1159 aa15.98■□□□□ 0.15
DDX55-203ENST00000421670 FZD5Q13467 585 aa15.98■□□□□ 0.15
DDX55-203ENST00000421670 HNRNPDQ14103 355 aaKnown RBP15.98■□□□□ 0.15
DDX55-203ENST00000421670 CYTH1Q15438 398 aa15.98■□□□□ 0.15
DDX55-203ENST00000421670 DLG2Q15700 870 aa15.98■□□□□ 0.15
DDX55-203ENST00000421670 WHAMMP3Q1A5X7 153 aa15.98■□□□□ 0.15
DDX55-203ENST00000421670 FBXO43Q4G163 708 aa15.98■□□□□ 0.15
DDX55-203ENST00000421670 INO80DQ53TQ3 878 aaPredicted RBP15.98■□□□□ 0.15
DDX55-203ENST00000421670 DGKKQ5KSL6 1271 aa15.98■□□□□ 0.15
DDX55-203ENST00000421670 MARC1Q5VT66 337 aa15.98■□□□□ 0.15
DDX55-203ENST00000421670 Q6ZVU0 165 aa15.98■□□□□ 0.15
DDX55-203ENST00000421670 CCDC105Q8IYK2 499 aa15.98■□□□□ 0.15
DDX55-203ENST00000421670 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.98■□□□□ 0.15
DDX55-203ENST00000421670 FAM71DQ8N9W8 422 aa15.98■□□□□ 0.15
DDX55-203ENST00000421670 FATE1Q969F0 183 aa15.98■□□□□ 0.15
DDX55-203ENST00000421670 TMEM245Q9H330 911 aa15.98■□□□□ 0.15
DDX55-203ENST00000421670 LMAN1LQ9HAT1 526 aa15.98■□□□□ 0.15
DDX55-203ENST00000421670 USP29Q9HBJ7 922 aa15.98■□□□□ 0.15
DDX55-203ENST00000421670 NT5MQ9NPB1 228 aa15.98■□□□□ 0.15
DDX55-203ENST00000421670 HOMER3Q9NSC5 361 aa15.98■□□□□ 0.15
DDX55-203ENST00000421670 LHX3Q9UBR4 397 aa15.98■□□□□ 0.15
DDX55-203ENST00000421670 STON1Q9Y6Q2 735 aa15.98■□□□□ 0.15
DDX55-203ENST00000421670 WDFY4Q6ZS81 3184 aa15.97■□□□□ 0.15
DDX55-203ENST00000421670 CXorf51AA0A1B0GTR3 108 aa15.97■□□□□ 0.15
DDX55-203ENST00000421670 SGK1O00141 431 aa15.97■□□□□ 0.15
DDX55-203ENST00000421670 ATP9BO43861 1147 aa15.97■□□□□ 0.15
DDX55-203ENST00000421670 BNIP3LO60238 219 aa15.97■□□□□ 0.15
DDX55-203ENST00000421670 ZNF821O75541 412 aaPredicted RBP15.97■□□□□ 0.15
DDX55-203ENST00000421670 GJB3O75712 270 aa15.97■□□□□ 0.15
DDX55-203ENST00000421670 KLF8O95600 359 aaPredicted RBP15.97■□□□□ 0.15
DDX55-203ENST00000421670 HLA-DQB2P05538 268 aa15.97■□□□□ 0.15
DDX55-203ENST00000421670 ITGAVP06756 1048 aa15.97■□□□□ 0.15
DDX55-203ENST00000421670 RGRP47804 291 aa15.97■□□□□ 0.15
DDX55-203ENST00000421670 RENBPP51606 427 aa15.97■□□□□ 0.15
DDX55-203ENST00000421670 MAXP61244 160 aa15.97■□□□□ 0.15
DDX55-203ENST00000421670 RHOAP61586 193 aa15.97■□□□□ 0.15
DDX55-203ENST00000421670 CKAP4Q07065 602 aaKnown RBP15.97■□□□□ 0.15
DDX55-203ENST00000421670 LRRC32Q14392 662 aa15.97■□□□□ 0.15
DDX55-203ENST00000421670 RFTN1Q14699 578 aaPredicted RBP15.97■□□□□ 0.15
DDX55-203ENST00000421670 CWF19L1Q69YN2 538 aaKnown RBP15.97■□□□□ 0.15
DDX55-203ENST00000421670 DRICH1Q6PGQ1 229 aaPredicted RBP15.97■□□□□ 0.15
DDX55-203ENST00000421670 CCDC137Q6PK04 289 aaKnown RBP15.97■□□□□ 0.15
DDX55-203ENST00000421670 KLHL7Q8IXQ5 586 aa15.97■□□□□ 0.15
DDX55-203ENST00000421670 PGBD5Q8N414 524 aa15.97■□□□□ 0.15
DDX55-203ENST00000421670 TEX26Q8N6G2 289 aa15.97■□□□□ 0.15
DDX55-203ENST00000421670 TXNDC5Q8NBS9 432 aaKnown RBP15.97■□□□□ 0.15
DDX55-203ENST00000421670 SPATA4Q8NEY3 305 aa15.97■□□□□ 0.15
DDX55-203ENST00000421670 FRS2Q8WU20 508 aa15.97■□□□□ 0.15
DDX55-203ENST00000421670 AGAP3Q96P47 875 aa15.97■□□□□ 0.15
DDX55-203ENST00000421670 IL12RB2Q99665 862 aa15.97■□□□□ 0.15
DDX55-203ENST00000421670 RBM22Q9NW64 420 aaKnown RBP eCLIP15.97■□□□□ 0.15
DDX55-203ENST00000421670 ADAM23O75077 832 aa15.96■□□□□ 0.15
DDX55-203ENST00000421670 NEBLO76041 1014 aa15.96■□□□□ 0.15
DDX55-203ENST00000421670 EPHX1P07099 455 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms