RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 MPP6Q9NZW5 540 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 MTO1Q9Y2Z2 717 aaKnown RBP10.89□□□□□ -0.67
PTCH1-206ENST00000421141 RNF103-CHMP3A0A140T963 221 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 CHADO15335 359 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 TGFB1I1O43294 461 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 VAPBO95292 243 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 FKBP9O95302 570 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 CATP04040 527 aaKnown RBP10.89□□□□□ -0.67
PTCH1-206ENST00000421141 SLC35G4P0C7Q5 338 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 LPOP22079 712 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-206ENST00000421141 PRKCIP41743 596 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 ALDH9A1P49189 494 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 FKBP9P1Q75LS8 142 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 GPSM1Q86YR5 675 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 HDDC3Q8N4P3 179 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 POF1BQ8WVV4 589 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 BADQ92934 168 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 ARL15Q9NXU5 204 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 AURKCQ9UQB9 309 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 E9PAM4 449 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 GCATO75600 419 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 RPA3P35244 121 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-206ENST00000421141 CAPZA2P47755 286 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 PGS1Q32NB8 556 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 ZNF784Q8NCA9 323 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-206ENST00000421141 PIP4K2CQ8TBX8 421 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 PHPT1Q9NRX4 125 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-206ENST00000421141 SAE1Q9UBE0 346 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-206ENST00000421141 CASP8AP2Q9UKL3 1982 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 PPP2R1BP30154 601 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 SLC10A6Q3KNW5 377 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 HSP90AA5PQ58FG0 334 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 CCNI2Q6ZMN8 369 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-206ENST00000421141 LRRC55Q6ZSA7 311 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 SLC26A11Q86WA9 606 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 FBXO39Q8N4B4 442 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 TRIML2Q8N7C3 387 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 PABPC3Q9H361 631 aaKnown RBP10.88□□□□□ -0.67
PTCH1-206ENST00000421141 CYP4F12Q9HCS2 524 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 GJB6O95452 261 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 CDH4P55283 916 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 SH3BGRP55822 239 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-206ENST00000421141 COLGALT2Q8IYK4 626 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 ZCWPW1Q9H0M4 648 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 PLK2Q9NYY3 685 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 TBC1D30Q9Y2I9 924 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 COLEC10Q9Y6Z7 277 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 COL5A3P25940 1745 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-206ENST00000421141 PRMT3O60678 531 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 CHN1P15882 459 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 CDH2P19022 906 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-206ENST00000421141 GDI1P31150 447 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 ABL2P42684 1182 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 MAP3K10Q02779 954 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 SLC20A2Q08357 652 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 MAD2L1Q13257 205 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-206ENST00000421141 KBTBD12Q3ZCT8 623 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 PCID2Q5JVF3 399 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 FOXR1Q6PIV2 292 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 MAMDC4Q6UXC1 1216 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 HORMAD1Q86X24 394 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 C10orf53Q8N6V4 93 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 FZD8Q9H461 694 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 FGF1P05230 155 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 IQCF3P0C7M6 154 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 RARAP10276 462 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 CAP1Q01518 475 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 HIC1Q14526 733 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 C17orf99Q6UX52 265 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 ARL14EPQ8N8R7 260 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-206ENST00000421141 KCTD5Q9NXV2 234 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 RPS6KB2Q9UBS0 482 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 SIK3Q9Y2K2 1263 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 SNX8Q9Y5X2 465 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 MYO7AQ13402 2215 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 TMEM120BA0PK00 339 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 F8W810 466 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 DNAJC8O75937 253 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-206ENST00000421141 ENO1P06733 434 aaKnown RBP10.88□□□□□ -0.67
PTCH1-206ENST00000421141 TRIP4Q15650 581 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-206ENST00000421141 RNF157Q96PX1 679 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-206ENST00000421141 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-206ENST00000421141 RBL1P28749 1068 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 HPCAL1P37235 193 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 VSNL1P62760 191 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 MYO19Q96H55 970 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 CACNA2D2Q9NY47 1150 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 PCDHGC5Q9Y5F6 944 aa10.88□□□□□ -0.67
PTCH1-206ENST00000421141 IRAK2O43187 625 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 CCNDBP1O95273 360 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 TIMP1P01033 207 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 RAD23BP54727 409 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 CRY1Q16526 586 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 DNAJB7Q7Z6W7 309 aaPredicted RBP10.87□□□□□ -0.67
PTCH1-206ENST00000421141 ZNF614Q8N883 585 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 TSTD1Q8NFU3 115 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 A0A1W2PRU2 124 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 PITPNM1O00562 1244 aa10.87□□□□□ -0.67
PTCH1-206ENST00000421141 CLNS1AP54105 237 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms