RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 RNF103O00237 685 aa12.71□□□□□ -0.37
TMEM53-206ENST00000420706 MAN2B1O00754 1011 aa12.71□□□□□ -0.37
TMEM53-206ENST00000420706 RIOK3O14730 519 aaKnown RBP12.71□□□□□ -0.37
TMEM53-206ENST00000420706 TTI1O43156 1089 aa12.71□□□□□ -0.37
TMEM53-206ENST00000420706 RAD51CO43502 376 aa12.71□□□□□ -0.37
TMEM53-206ENST00000420706 SMAD6O43541 496 aaKnown RBP12.71□□□□□ -0.37
TMEM53-206ENST00000420706 ECEL1O95672 775 aa12.71□□□□□ -0.37
TMEM53-206ENST00000420706 IFNB1P01574 187 aa12.71□□□□□ -0.37
TMEM53-206ENST00000420706 KRT14P02533 472 aa12.71□□□□□ -0.37
TMEM53-206ENST00000420706 SRPRAP08240 638 aaKnown RBP12.71□□□□□ -0.37
TMEM53-206ENST00000420706 DLDP09622 509 aaKnown RBP12.71□□□□□ -0.37
TMEM53-206ENST00000420706 ZSCAN5DPP0CG00 497 aa12.71□□□□□ -0.37
TMEM53-206ENST00000420706 SRCP12931 536 aa12.71□□□□□ -0.37
TMEM53-206ENST00000420706 RPL22P35268 128 aaKnown RBP12.71□□□□□ -0.37
TMEM53-206ENST00000420706 MMP13P45452 471 aa12.71□□□□□ -0.37
TMEM53-206ENST00000420706 STK19P49842 368 aaPredicted RBP12.71□□□□□ -0.37
TMEM53-206ENST00000420706 SERPINH1P50454 418 aaKnown RBP12.71□□□□□ -0.37
TMEM53-206ENST00000420706 GEMIN4P57678 1058 aaKnown RBP12.71□□□□□ -0.37
TMEM53-206ENST00000420706 MRPS25P82663 173 aaKnown RBP12.71□□□□□ -0.37
TMEM53-206ENST00000420706 DR1Q01658 176 aa12.71□□□□□ -0.37
TMEM53-206ENST00000420706 PRKCQQ04759 706 aa12.71□□□□□ -0.37
TMEM53-206ENST00000420706 PTPRNQ16849 979 aa12.71□□□□□ -0.37
TMEM53-206ENST00000420706 P3H1Q32P28 736 aa12.71□□□□□ -0.37
TMEM53-206ENST00000420706 FSTL4Q6MZW2 842 aa12.71□□□□□ -0.37
TMEM53-206ENST00000420706 TPRG1Q6ZUI0 275 aa12.71□□□□□ -0.37
TMEM53-206ENST00000420706 PID1Q7Z2X4 250 aa12.71□□□□□ -0.37
TMEM53-206ENST00000420706 MAATS1Q7Z4T9 603 aa12.71□□□□□ -0.37
TMEM53-206ENST00000420706 SH2D3CQ8N5H7 860 aa12.71□□□□□ -0.37
TMEM53-206ENST00000420706 CCDC110Q8TBZ0 833 aa12.71□□□□□ -0.37
TMEM53-206ENST00000420706 UCMAQ8WVF2 138 aa12.71□□□□□ -0.37
TMEM53-206ENST00000420706 FAM3CQ92520 227 aa12.71□□□□□ -0.37
TMEM53-206ENST00000420706 MYO19Q96H55 970 aa12.71□□□□□ -0.37
TMEM53-206ENST00000420706 TEKT5Q96M29 485 aa12.71□□□□□ -0.37
TMEM53-206ENST00000420706 SPATA13Q96N96 652 aa12.71□□□□□ -0.37
TMEM53-206ENST00000420706 NECAB3Q96P71 396 aaPredicted RBP12.71□□□□□ -0.37
TMEM53-206ENST00000420706 UHRF1Q96T88 793 aaPredicted RBP12.71□□□□□ -0.37
TMEM53-206ENST00000420706 LRRC1Q9BTT6 524 aa12.71□□□□□ -0.37
TMEM53-206ENST00000420706 CEP41Q9BYV8 373 aa12.71□□□□□ -0.37
TMEM53-206ENST00000420706 THAP10Q9P2Z0 257 aaPredicted RBP12.71□□□□□ -0.37
TMEM53-206ENST00000420706 CA14Q9ULX7 337 aa12.71□□□□□ -0.37
TMEM53-206ENST00000420706 HS3ST2Q9Y278 367 aa12.71□□□□□ -0.37
TMEM53-206ENST00000420706 ATP8A1Q9Y2Q0 1164 aa12.71□□□□□ -0.37
TMEM53-206ENST00000420706 FCF1Q9Y324 198 aaKnown RBP12.71□□□□□ -0.37
TMEM53-206ENST00000420706 FAM187AA6NFU0 413 aa12.7□□□□□ -0.38
TMEM53-206ENST00000420706 ZBTB24O43167 697 aaPredicted RBP12.7□□□□□ -0.38
TMEM53-206ENST00000420706 ATP9BO43861 1147 aa12.7□□□□□ -0.38
TMEM53-206ENST00000420706 STK10O94804 968 aaKnown RBP12.7□□□□□ -0.38
TMEM53-206ENST00000420706 TMCC1O94876 653 aa12.7□□□□□ -0.38
TMEM53-206ENST00000420706 GAS8O95995 478 aa12.7□□□□□ -0.38
TMEM53-206ENST00000420706 EGFP01133 1207 aa12.7□□□□□ -0.38
TMEM53-206ENST00000420706 HLA-DQB2P05538 268 aa12.7□□□□□ -0.38
TMEM53-206ENST00000420706 DRD1P21728 446 aa12.7□□□□□ -0.38
TMEM53-206ENST00000420706 CD68P34810 354 aaPredicted RBP12.7□□□□□ -0.38
TMEM53-206ENST00000420706 NNMTP40261 264 aa12.7□□□□□ -0.38
TMEM53-206ENST00000420706 GRSF1Q12849 480 aaKnown RBP eCLIP12.7□□□□□ -0.38
TMEM53-206ENST00000420706 TRIP13Q15645 432 aaPredicted RBP12.7□□□□□ -0.38
TMEM53-206ENST00000420706 EMC10Q5UCC4 262 aa12.7□□□□□ -0.38
TMEM53-206ENST00000420706 SYDE1Q6ZW31 735 aaPredicted RBP12.7□□□□□ -0.38
TMEM53-206ENST00000420706 METTL3Q86U44 580 aaKnown RBP12.7□□□□□ -0.38
TMEM53-206ENST00000420706 JAMLQ86YT9 394 aa12.7□□□□□ -0.38
TMEM53-206ENST00000420706 UBALD2Q8IYN6 164 aa12.7□□□□□ -0.38
TMEM53-206ENST00000420706 BBS5Q8N3I7 341 aa12.7□□□□□ -0.38
TMEM53-206ENST00000420706 PGBD5Q8N414 524 aa12.7□□□□□ -0.38
TMEM53-206ENST00000420706 CCDC89Q8N998 374 aa12.7□□□□□ -0.38
TMEM53-206ENST00000420706 ATP11CQ8NB49 1132 aa12.7□□□□□ -0.38
TMEM53-206ENST00000420706 KDM1BQ8NB78 822 aa12.7□□□□□ -0.38
TMEM53-206ENST00000420706 ZNF419Q96HQ0 510 aaPredicted RBP12.7□□□□□ -0.38
TMEM53-206ENST00000420706 AGAP3Q96P47 875 aa12.7□□□□□ -0.38
TMEM53-206ENST00000420706 CINPQ9BW66 212 aaPredicted RBP12.7□□□□□ -0.38
TMEM53-206ENST00000420706 NT5MQ9NPB1 228 aa12.7□□□□□ -0.38
TMEM53-206ENST00000420706 KLHL8Q9P2G9 620 aaPredicted RBP12.7□□□□□ -0.38
TMEM53-206ENST00000420706 SEPT3Q9UH03 358 aa12.7□□□□□ -0.38
TMEM53-206ENST00000420706 TRHDEQ9UKU6 1024 aa12.7□□□□□ -0.38
TMEM53-206ENST00000420706 PLA2G4CQ9UP65 541 aa12.7□□□□□ -0.38
TMEM53-206ENST00000420706 KRBA1A5PL33 1030 aa12.69□□□□□ -0.38
TMEM53-206ENST00000420706 MUSKO15146 869 aa12.69□□□□□ -0.38
TMEM53-206ENST00000420706 OPHN1O60890 802 aa12.69□□□□□ -0.38
TMEM53-206ENST00000420706 ZNF821O75541 412 aaPredicted RBP12.69□□□□□ -0.38
TMEM53-206ENST00000420706 NEBLO76041 1014 aa12.69□□□□□ -0.38
TMEM53-206ENST00000420706 HNRNPLP14866 589 aaKnown RBP eCLIP12.69□□□□□ -0.38
TMEM53-206ENST00000420706 CD72P21854 359 aa12.69□□□□□ -0.38
TMEM53-206ENST00000420706 ACTN2P35609 894 aa12.69□□□□□ -0.38
TMEM53-206ENST00000420706 HSPA9P38646 679 aaKnown RBP12.69□□□□□ -0.38
TMEM53-206ENST00000420706 KIR2DL1P43626 348 aaPredicted RBP12.69□□□□□ -0.38
TMEM53-206ENST00000420706 STARD6P59095 220 aa12.69□□□□□ -0.38
TMEM53-206ENST00000420706 MAXP61244 160 aa12.69□□□□□ -0.38
TMEM53-206ENST00000420706 NSUN2Q08J23 767 aaKnown RBP eCLIP12.69□□□□□ -0.38
TMEM53-206ENST00000420706 PTK6Q13882 451 aa12.69□□□□□ -0.38
TMEM53-206ENST00000420706 ZNF235Q14590 738 aa12.69□□□□□ -0.38
TMEM53-206ENST00000420706 PPP1R7Q15435 360 aa12.69□□□□□ -0.38
TMEM53-206ENST00000420706 DLG2Q15700 870 aa12.69□□□□□ -0.38
TMEM53-206ENST00000420706 GLE1Q53GS7 698 aaKnown RBP12.69□□□□□ -0.38
TMEM53-206ENST00000420706 DGKKQ5KSL6 1271 aa12.69□□□□□ -0.38
TMEM53-206ENST00000420706 C8orf74Q6P047 294 aa12.69□□□□□ -0.38
TMEM53-206ENST00000420706 ZNF852Q6ZMS4 543 aa12.69□□□□□ -0.38
TMEM53-206ENST00000420706 TSEN2Q8NCE0 465 aaKnown RBP12.69□□□□□ -0.38
TMEM53-206ENST00000420706 ISG20Q96AZ6 181 aaKnown RBP12.69□□□□□ -0.38
TMEM53-206ENST00000420706 PSKH2Q96QS6 385 aa12.69□□□□□ -0.38
TMEM53-206ENST00000420706 TRIM51Q9BSJ1 452 aa12.69□□□□□ -0.38
TMEM53-206ENST00000420706 CEP44Q9C0F1 390 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms