RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 RAMP2O60895 175 aa16.81■□□□□ 0.28
LINC00404-201ENST00000418660 ZNF821O75541 412 aaPredicted RBP16.81■□□□□ 0.28
LINC00404-201ENST00000418660 SKILP12757 684 aa16.81■□□□□ 0.28
LINC00404-201ENST00000418660 EPHB2P29323 1055 aa16.81■□□□□ 0.28
LINC00404-201ENST00000418660 GEMIN4P57678 1058 aaKnown RBP16.81■□□□□ 0.28
LINC00404-201ENST00000418660 SHC2P98077 582 aa16.81■□□□□ 0.28
LINC00404-201ENST00000418660 CCDC15Q0P6D6 951 aa16.81■□□□□ 0.28
LINC00404-201ENST00000418660 POM121L1PQ3SYA9 428 aa16.81■□□□□ 0.28
LINC00404-201ENST00000418660 ARSIQ5FYB1 569 aa16.81■□□□□ 0.28
LINC00404-201ENST00000418660 ADAT2Q7Z6V5 191 aaKnown RBP16.81■□□□□ 0.28
LINC00404-201ENST00000418660 RTL3Q8N8U3 475 aaKnown RBP16.81■□□□□ 0.28
LINC00404-201ENST00000418660 CHST14Q8NCH0 376 aa16.81■□□□□ 0.28
LINC00404-201ENST00000418660 SYN2Q92777 582 aaPredicted RBP16.81■□□□□ 0.28
LINC00404-201ENST00000418660 SKA1Q96BD8 255 aa16.81■□□□□ 0.28
LINC00404-201ENST00000418660 IQCDQ96DY2 449 aa16.81■□□□□ 0.28
LINC00404-201ENST00000418660 SLC6A18Q96N87 628 aa16.81■□□□□ 0.28
LINC00404-201ENST00000418660 EPAS1Q99814 870 aa16.81■□□□□ 0.28
LINC00404-201ENST00000418660 TM7SF3Q9NS93 570 aa16.81■□□□□ 0.28
LINC00404-201ENST00000418660 IL36AQ9UHA7 158 aa16.81■□□□□ 0.28
LINC00404-201ENST00000418660 HPCAL4Q9UM19 191 aa16.81■□□□□ 0.28
LINC00404-201ENST00000418660 PCDHGB2Q9Y5G2 931 aa16.81■□□□□ 0.28
LINC00404-201ENST00000418660 BZW2Q9Y6E2 419 aaKnown RBP16.81■□□□□ 0.28
LINC00404-201ENST00000418660 CACNA1EQ15878 2313 aa16.81■□□□□ 0.28
LINC00404-201ENST00000418660 CNOT1A5YKK6 2376 aaKnown RBP16.8■□□□□ 0.28
LINC00404-201ENST00000418660 ASCC3Q8N3C0 2202 aaKnown RBP16.8■□□□□ 0.28
LINC00404-201ENST00000418660 TMEM191CA6NGB0 347 aa16.8■□□□□ 0.28
LINC00404-201ENST00000418660 ATMINO43313 823 aaPredicted RBP16.8■□□□□ 0.28
LINC00404-201ENST00000418660 CD160O95971 181 aa16.8■□□□□ 0.28
LINC00404-201ENST00000418660 PSMA2P25787 234 aa16.8■□□□□ 0.28
LINC00404-201ENST00000418660 NUDT1P36639 197 aa16.8■□□□□ 0.28
LINC00404-201ENST00000418660 CTSKP43235 329 aa16.8■□□□□ 0.28
LINC00404-201ENST00000418660 C21orf59P57076 290 aa16.8■□□□□ 0.28
LINC00404-201ENST00000418660 PPP2CBP62714 309 aa16.8■□□□□ 0.28
LINC00404-201ENST00000418660 PPP2CAP67775 309 aa16.8■□□□□ 0.28
LINC00404-201ENST00000418660 POLD3Q15054 466 aaPredicted RBP16.8■□□□□ 0.28
LINC00404-201ENST00000418660 CARD16Q5EG05 197 aa16.8■□□□□ 0.28
LINC00404-201ENST00000418660 PIP5KL1Q5T9C9 394 aa16.8■□□□□ 0.28
LINC00404-201ENST00000418660 LAYNQ6UX15 382 aa16.8■□□□□ 0.28
LINC00404-201ENST00000418660 DPY19L3Q6ZPD9 716 aa16.8■□□□□ 0.28
LINC00404-201ENST00000418660 PRPF39Q86UA1 669 aaKnown RBP16.8■□□□□ 0.28
LINC00404-201ENST00000418660 DNAAF5Q86Y56 855 aa16.8■□□□□ 0.28
LINC00404-201ENST00000418660 NAXDQ8IW45 347 aa16.8■□□□□ 0.28
LINC00404-201ENST00000418660 PLPP6Q8IY26 295 aa16.8■□□□□ 0.28
LINC00404-201ENST00000418660 ISG20Q96AZ6 181 aaKnown RBP16.8■□□□□ 0.28
LINC00404-201ENST00000418660 TRIM11Q96F44 468 aa16.8■□□□□ 0.28
LINC00404-201ENST00000418660 CAMK1GQ96NX5 476 aa16.8■□□□□ 0.28
LINC00404-201ENST00000418660 ISCUQ9H1K1 167 aa16.8■□□□□ 0.28
LINC00404-201ENST00000418660 DYRK4Q9NR20 520 aa16.8■□□□□ 0.28
LINC00404-201ENST00000418660 AASDHPPTQ9NRN7 309 aa16.8■□□□□ 0.28
LINC00404-201ENST00000418660 CNOT8Q9UFF9 292 aaKnown RBP16.8■□□□□ 0.28
LINC00404-201ENST00000418660 FNDC3AQ9Y2H6 1198 aaKnown RBP16.8■□□□□ 0.28
LINC00404-201ENST00000418660 FCF1Q9Y324 198 aaKnown RBP16.8■□□□□ 0.28
LINC00404-201ENST00000418660 SPAARA0A1B0GVQ0 90 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 WASH4PA8MWX3 477 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 KDELR3O43731 214 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 CREB3O43889 395 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 WNT1P04628 370 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 MYBL1P10243 752 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 CD38P28907 300 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 HTR7P34969 479 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 DNA2P51530 1060 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 YBEYP58557 167 aaPredicted RBP16.79■□□□□ 0.28
LINC00404-201ENST00000418660 TAS2R38P59533 333 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 SIM1P81133 766 aaPredicted RBP16.79■□□□□ 0.28
LINC00404-201ENST00000418660 ZBED6P86452 979 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 ZNF423Q2M1K9 1284 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 KCNT1Q5JUK3 1230 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 HGSNATQ68CP4 663 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 NEK5Q6P3R8 708 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 DBX2Q6ZNG2 339 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 TRIM69Q86WT6 500 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 FNIP1Q8TF40 1166 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 ARRDC3Q96B67 414 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 ZNF653Q96CK0 615 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 PPP1R16AQ96I34 528 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 SERAC1Q96JX3 654 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 CNTNAP3BQ96NU0 1288 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 HEPHQ9BQS7 1158 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 HDAC8Q9BY41 377 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 CNTNAP3Q9BZ76 1288 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 NOL6Q9H6R4 1146 aaKnown RBP16.79■□□□□ 0.28
LINC00404-201ENST00000418660 CATSPERBQ9H7T0 1116 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 PREBQ9HCU5 417 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 IFNKQ9P0W0 207 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 ARHGAP20Q9P2F6 1191 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 CAPN11Q9UMQ6 739 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 DMTF1Q9Y222 760 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 PCDHB9Q9Y5E1 797 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 ACTL7AQ9Y615 435 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 SCINQ9Y6U3 715 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 WASF2Q9Y6W5 498 aa16.79■□□□□ 0.28
LINC00404-201ENST00000418660 A0A1W2PR77 199 aa16.78■□□□□ 0.28
LINC00404-201ENST00000418660 ZSCAN5CA6NGD5 496 aaPredicted RBP16.78■□□□□ 0.28
LINC00404-201ENST00000418660 EIF3CLB5ME19 914 aaKnown RBP16.78■□□□□ 0.28
LINC00404-201ENST00000418660 RNF103O00237 685 aa16.78■□□□□ 0.28
LINC00404-201ENST00000418660 KCNK3O14649 394 aa16.78■□□□□ 0.28
LINC00404-201ENST00000418660 WNT9AO14904 365 aa16.78■□□□□ 0.28
LINC00404-201ENST00000418660 FGF10O15520 208 aaPredicted RBP16.78■□□□□ 0.28
LINC00404-201ENST00000418660 DFNA5O60443 496 aa16.78■□□□□ 0.28
LINC00404-201ENST00000418660 LEFTY1O75610 366 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms