RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 RRP7AQ9Y3A4 280 aaKnown RBP2.91□□□□□ -1.94
VPS41-206ENST00000418457 UGGT1Q9NYU2 1555 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 ZNF804BA4D1E1 1349 aa2.91□□□□□ -1.94
VPS41-206ENST00000418457 SETD1BQ9UPS6 1966 aaKnown RBP2.91□□□□□ -1.94
VPS41-206ENST00000418457 CAMSAP1Q5T5Y3 1602 aa2.9□□□□□ -1.94
VPS41-206ENST00000418457 NEXMIFQ5QGS0 1516 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 TULP4Q9NRJ4 1543 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 UQCRHLA0A096LP55 91 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 DPPA5A6NC42 116 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 NPIPB13A6NJU9 1138 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 SAC3D1A6NKF1 404 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 NPIPB5A8MRT5 1133 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 NPIPB4C9JG80 1138 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 E5RJQ4 531 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 F8W810 466 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 STX16-NPEPL1H3BU86 382 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 OVOL3O00110 214 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 EIF3FO00303 357 aaPredicted RBP2.9□□□□□ -1.95
VPS41-206ENST00000418457 STX16O14662 325 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 CCNT1O60563 726 aaKnown RBP2.9□□□□□ -1.95
VPS41-206ENST00000418457 REC8O95072 547 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 UQCRHP07919 91 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 CSF1P09603 554 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 CTSAP10619 480 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 ACP5P13686 325 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 PKMP14618 531 aaKnown RBP2.9□□□□□ -1.95
VPS41-206ENST00000418457 PRPH2P23942 346 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 GSTM2P28161 218 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 TMPOP42166 694 aaKnown RBP2.9□□□□□ -1.95
VPS41-206ENST00000418457 MMP13P45452 471 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 LMOD3Q0VAK6 560 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 SLC12A1Q13621 1099 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 THOC5Q13769 683 aaKnown RBP2.9□□□□□ -1.95
VPS41-206ENST00000418457 TRIP6Q15654 476 aaKnown RBP2.9□□□□□ -1.95
VPS41-206ENST00000418457 ZSCAN23Q3MJ62 389 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 CTXN3Q4LDR2 81 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 RUNDC3AQ59EK9 446 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 ARL13AQ5H913 290 aaPredicted RBP2.9□□□□□ -1.95
VPS41-206ENST00000418457 COLEC12Q5KU26 742 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 C10orf76Q5T2E6 689 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 TAF3Q5VWG9 929 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 MORN5Q5VZ52 161 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 ZNF626Q68DY1 528 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 LRIG3Q6UXM1 1119 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 ZNF793Q6ZN11 406 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 DEF8Q6ZN54 512 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 RTL10Q7L3V2 364 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 MDGA2Q7Z553 956 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 TMEM200AQ86VY9 491 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 VPS52Q8N1B4 723 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 ANKRD44Q8N8A2 993 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 ARL14EPQ8N8R7 260 aaPredicted RBP2.9□□□□□ -1.95
VPS41-206ENST00000418457 EXD3Q8N9H8 876 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 RBM17Q96I25 401 aaKnown RBP2.9□□□□□ -1.95
VPS41-206ENST00000418457 PLEKHF1Q96S99 279 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 CCDC94Q9BW85 323 aaPredicted RBP2.9□□□□□ -1.95
VPS41-206ENST00000418457 HDHD5Q9BXW7 423 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 TRIM31Q9BZY9 425 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 API5Q9BZZ5 524 aaKnown RBP2.9□□□□□ -1.95
VPS41-206ENST00000418457 ARHGAP39Q9C0H5 1083 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 TXNRD2Q9NNW7 524 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 TMEM184CQ9NVA4 438 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 THAP1Q9NVV9 213 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 TMEM45AQ9NWC5 275 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 ARL15Q9NXU5 204 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 DNAJC16Q9Y2G8 782 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 PKP3Q9Y446 797 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 CD109Q6YHK3 1445 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 SSH2Q76I76 1423 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 ABCC4O15439 1325 aa2.9□□□□□ -1.95
VPS41-206ENST00000418457 ZNF335Q9H4Z2 1342 aaPredicted RBP2.9□□□□□ -1.95
VPS41-206ENST00000418457 PNPLA6Q8IY17 1366 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 LRRC7Q96NW7 1537 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 ADAMTSL3P82987 1691 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 KCNJ18B7U540 433 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 ADAM10O14672 748 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 SYN3O14994 580 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 NPHP1O15259 732 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 CREB3O43889 395 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 UGDHO60701 494 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 CNPP09543 421 aaKnown RBP2.89□□□□□ -1.95
VPS41-206ENST00000418457 LYL1P12980 280 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 CYP4B1P13584 511 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 TNNT1P13805 278 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 HOXB9P17482 250 aaPredicted RBP2.89□□□□□ -1.95
VPS41-206ENST00000418457 MCCP23508 829 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 HOXD9P28356 352 aaPredicted RBP2.89□□□□□ -1.95
VPS41-206ENST00000418457 CIITAP33076 1130 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 STAT1P42224 750 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 MAPK9P45984 424 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 RPS6KA3P51812 740 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 RIPK4P57078 832 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 SSBP2P81877 361 aaPredicted RBP2.89□□□□□ -1.95
VPS41-206ENST00000418457 CPSF1Q10570 1443 aaKnown RBP2.89□□□□□ -1.95
VPS41-206ENST00000418457 GALNT3Q14435 633 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 PGM5Q15124 567 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 ANKRD1Q15327 319 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 ITSN1Q15811 1721 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 FAM135BQ49AJ0 1406 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 Q4G0T1 1027 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms