RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 TGM2P21980 687 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 CA8P35219 290 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 ETFBP38117 255 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 GARSP41250 739 aaKnown RBP8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 LIG4P49917 911 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 SOX10P56693 466 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 RALGDSQ12967 914 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 NXNQ6DKJ4 435 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 DENND1BQ6P3S1 775 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 OR5B17Q8NGF7 314 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 CANT1Q8WVQ1 401 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 FBXL20Q96IG2 436 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 CGRRF1Q99675 332 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 APBA2Q99767 749 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 WDR12Q9GZL7 423 aaKnown RBP8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 AGO4Q9HCK5 861 aaKnown RBP8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 SPAG4Q9NPE6 437 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 DKK3Q9UBP4 350 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 AGO2Q9UKV8 859 aaKnown RBP8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 PARP14Q460N5 1801 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 KCNH1O95259 989 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 ATG7O95352 703 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 CLIC3O95833 236 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 JUNP05412 331 aaKnown RBP8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 EPHX2P34913 555 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 GP5P40197 560 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 YWHAEP62258 255 aaKnown RBP8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 MPP1Q00013 466 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 LRP8Q14114 963 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 CASC4Q6P4E1 433 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 NIPA1Q7RTP0 329 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 ANKRD13AQ8IZ07 590 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 GLT1D1Q96MS3 346 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 CISHQ9NSE2 258 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 OXSMQ9NWU1 459 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 TXNDC16Q9P2K2 825 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 CYTH4Q9UIA0 394 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 CCNL1Q9UK58 526 aaPredicted RBP8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 MRPL11Q9Y3B7 192 aaKnown RBP8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 TNFRSF10AO00220 468 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 ASS1P00966 412 aaKnown RBP8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 MBL2P11226 248 aaPredicted RBP8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 POLR2IP36954 125 aaKnown RBP8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 TPTEP56180 551 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 BCAR1P56945 870 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 IFITM2Q01629 132 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 PRKAA1Q13131 559 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 PRR5LQ6MZQ0 368 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 GK5Q6ZS86 529 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 FAM196AQ6ZSG2 479 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 CLEC14AQ86T13 490 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 XYLT1Q86Y38 959 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 TTC30BQ8N4P2 665 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 OR2T34Q8NGX1 318 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 OR2T3Q8NH03 318 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 CYGBQ8WWM9 190 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 RMDN3Q96TC7 470 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 CSF3RQ99062 836 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 UPF3AQ9H1J1 476 aaKnown RBP8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 RMND5AQ9H871 391 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 AKIP1Q9NQ31 210 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 CACNA2D2Q9NY47 1150 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 ATP11BQ9Y2G3 1177 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 SLC27A5Q9Y2P5 690 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 STYXL1Q9Y6J8 313 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 ADGRA2Q96PE1 1338 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 APOL1O14791 398 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 RGS13O14921 159 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 GMNNO75496 209 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 PIGNO95427 931 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 HMGCRP04035 888 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 UGT2B4P06133 528 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 MLNP12872 115 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 CRADDP78560 199 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 STX5Q13190 355 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 SEMA5AQ13591 1074 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 KIZQ2M2Z5 673 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 ARL13AQ5H913 290 aaPredicted RBP8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 GLRA4Q5JXX5 417 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 LDLRAP1Q5SW96 308 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 ZNF773Q6PK81 442 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 CHST15Q7LFX5 561 aaPredicted RBP8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 DHFR2Q86XF0 187 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 OFCC1Q8IZS5 231 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 DCLK2Q8N568 766 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 CERS5Q8N5B7 392 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 FAM110BQ8TC76 370 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 USP33Q8TEY7 942 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 SNX19Q92543 992 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 CLIP3Q96DZ5 547 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 C9orf16Q9BUW7 83 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 AGPAT4Q9NRZ5 378 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 CCM2LQ9NUG4 571 aaPredicted RBP8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 ASNSD1Q9NWL6 643 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 SFMBT1Q9UHJ3 866 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 ZDHHC2Q9UIJ5 367 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 ADAM28Q9UKQ2 775 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 MAP3K6O95382 1288 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 GDF11O95390 407 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 IL4RP24394 825 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms