RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 PGM5Q15124 567 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 MGAT5BQ3V5L5 792 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 CEP55Q53EZ4 464 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 ZNF658Q5TYW1 1059 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 WDR78Q5VTH9 848 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 LMBRD2Q68DH5 695 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 DLK2Q6UY11 383 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 ZNF66Q6ZN08 573 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 MOB2Q70IA6 237 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 PARS2Q7L3T8 475 aaKnown RBP4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 FASTKD5Q7L8L6 764 aaKnown RBP4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 NIPA1Q7RTP0 329 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 DHX40Q8IX18 779 aaKnown RBP4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 ANKRD20A12PQ8NF67 263 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 ABHD11Q8NFV4 315 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 ETNPPLQ8TBG4 499 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 SMCR8Q8TEV9 937 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 OSCP1Q8WVF1 389 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 CRYGNQ8WXF5 182 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 RAD54LQ92698 747 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 NAF1Q96HR8 494 aaKnown RBP4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 MRGPRX1Q96LB2 322 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 NT5C1BQ96P26 610 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 RMDN3Q96TC7 470 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 MXRA8Q9BRK3 442 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 CXorf36Q9H7Y0 433 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 GBA2Q9HCG7 927 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 KCNMB3Q9NPA1 279 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 PXMP2Q9NR77 195 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 DDX56Q9NY93 547 aaKnown RBP4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 FBXO40Q9UH90 709 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 PNMA8BQ9ULN7 279 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 MED16Q9Y2X0 877 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 FRMPD4Q14CM0 1322 aa4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 FNDC1Q4ZHG4 1894 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 ZNFX1Q9P2E3 1918 aaKnown RBP4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 MYH9P35579 1960 aaKnown RBP4.13□□□□□ -1.75
HMGB3P20-201ENST00000417997 MGAMO43451 1857 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 IGLV3-22A0A075B6J6 115 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 A0A088AWK7 358 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 CCL15-CCL14A0A0B4J2E2 113 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 E2F8A0AVK6 867 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 BICDL2A1A5D9 508 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 B4DLN1 442 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 H3BML4 177 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 IPO5O00410 1097 aaKnown RBP4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 ATP2A1O14983 1001 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 AKAP10O43572 662 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 EXOC3O60645 756 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 TBCAO75347 108 aaKnown RBP4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 MED24O75448 989 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 STAM2O75886 525 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 CELF2O95319 508 aaKnown RBP4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 VNN1O95497 513 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 SLC25A27O95847 323 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 THP07101 528 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 CETPP11597 493 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 CYP2C9P11712 490 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 CERS1P27544 350 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 RPA1P27694 616 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 HOXA7P31268 230 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 ZNF75DP51815 510 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 STX17P56962 302 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 FKBP1BP68106 108 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 CCNA1P78396 465 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 HOXA4Q00056 320 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 GHRHRQ02643 423 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 CYP4A11Q02928 519 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 BAATQ14032 418 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 CCL15Q16663 113 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 FILIP1LQ4L180 1135 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 SLC44A4Q53GD3 710 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 XRRA1Q6P2D8 792 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 SARM1Q6SZW1 724 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 TRIM72Q6ZMU5 477 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 Q6ZWC4 215 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 UNC13DQ70J99 1090 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 MIER3Q7Z3K6 550 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 GPBP1Q86WP2 473 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 CNGA4Q8IV77 575 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 FAM114A1Q8IWE2 563 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 CCDC65Q8IXS2 484 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 SPC24Q8NBT2 197 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 ZBTB34Q8NCN2 500 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 OR6B3Q8NGW1 331 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 IL31RAQ8NI17 732 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 CYP2W1Q8TAV3 490 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 SCARB1Q8WTV0 552 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 NELFBQ8WX92 580 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 GJA10Q969M2 543 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 DAZAP1Q96EP5 407 aaKnown RBP4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 CDHR1Q96JP9 859 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 TAAR1Q96RJ0 339 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 ACO2Q99798 780 aaKnown RBP4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 TSG101Q99816 390 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 MMTAG2Q9BU76 263 aaKnown RBP4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 QTRT1Q9BXR0 403 aaKnown RBP4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 TRIM9Q9C026 710 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 MS4A7Q9GZW8 240 aaPredicted RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms