RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 SMTNL1A8MU46 457 aa25.88■■□□□ 1.73
VEGFA-208ENST00000417285 KPNA3O00505 521 aaPredicted RBP25.88■■□□□ 1.73
VEGFA-208ENST00000417285 CTSLP07711 333 aa25.88■■□□□ 1.73
VEGFA-208ENST00000417285 KRT3P12035 628 aa25.88■■□□□ 1.73
VEGFA-208ENST00000417285 ATP1A3P13637 1013 aa25.88■■□□□ 1.73
VEGFA-208ENST00000417285 MAT2AP31153 395 aaKnown RBP25.88■■□□□ 1.73
VEGFA-208ENST00000417285 GNA12Q03113 381 aa25.88■■□□□ 1.73
VEGFA-208ENST00000417285 CLEC16AQ2KHT3 1053 aa25.88■■□□□ 1.73
VEGFA-208ENST00000417285 PIP5KL1Q5T9C9 394 aa25.88■■□□□ 1.73
VEGFA-208ENST00000417285 LINGO4Q6UY18 593 aa25.88■■□□□ 1.73
VEGFA-208ENST00000417285 OR7D4Q8NG98 312 aa25.88■■□□□ 1.73
VEGFA-208ENST00000417285 CENPIQ92674 756 aaPredicted RBP25.88■■□□□ 1.73
VEGFA-208ENST00000417285 PPP1R16AQ96I34 528 aa25.88■■□□□ 1.73
VEGFA-208ENST00000417285 PCDHB18PQ96TA0 734 aa25.88■■□□□ 1.73
VEGFA-208ENST00000417285 HDAC8Q9BY41 377 aa25.88■■□□□ 1.73
VEGFA-208ENST00000417285 ATP13A1Q9HD20 1204 aa25.88■■□□□ 1.73
VEGFA-208ENST00000417285 SEPT11Q9NVA2 429 aaKnown RBP25.88■■□□□ 1.73
VEGFA-208ENST00000417285 ADAM22Q9P0K1 906 aa25.88■■□□□ 1.73
VEGFA-208ENST00000417285 IL36AQ9UHA7 158 aa25.88■■□□□ 1.73
VEGFA-208ENST00000417285 GOLGA8CPA6NN73 597 aa25.87■■□□□ 1.73
VEGFA-208ENST00000417285 SRRM3A6NNA2 597 aaPredicted RBP25.87■■□□□ 1.73
VEGFA-208ENST00000417285 ZMPSTE24O75844 475 aa25.87■■□□□ 1.73
VEGFA-208ENST00000417285 CALB1P05937 261 aa25.87■■□□□ 1.73
VEGFA-208ENST00000417285 CCDC172P0C7W6 258 aa25.87■■□□□ 1.73
VEGFA-208ENST00000417285 CDK4P11802 303 aa25.87■■□□□ 1.73
VEGFA-208ENST00000417285 GSCP56915 257 aaPredicted RBP25.87■■□□□ 1.73
VEGFA-208ENST00000417285 TAS2R38P59533 333 aa25.87■■□□□ 1.73
VEGFA-208ENST00000417285 SHBQ15464 509 aa25.87■■□□□ 1.73
VEGFA-208ENST00000417285 CDO1Q16878 200 aa25.87■■□□□ 1.73
VEGFA-208ENST00000417285 C22orf39Q6P5X5 142 aa25.87■■□□□ 1.73
VEGFA-208ENST00000417285 PHLDB2Q86SQ0 1253 aa25.87■■□□□ 1.73
VEGFA-208ENST00000417285 PCDH20Q8N6Y1 951 aaKnown RBP25.87■■□□□ 1.73
VEGFA-208ENST00000417285 FREM2Q5SZK8 3169 aa25.87■■□□□ 1.73
VEGFA-208ENST00000417285 FAM208BQ5VWN6 2430 aa25.86■■□□□ 1.73
VEGFA-208ENST00000417285 CAPNS1P04632 268 aa25.86■■□□□ 1.73
VEGFA-208ENST00000417285 RHOQP17081 205 aa25.86■■□□□ 1.73
VEGFA-208ENST00000417285 SERPINH1P50454 418 aaKnown RBP25.86■■□□□ 1.73
VEGFA-208ENST00000417285 SCAPQ12770 1279 aa25.86■■□□□ 1.73
VEGFA-208ENST00000417285 PTP4A2Q12974 167 aa25.86■■□□□ 1.73
VEGFA-208ENST00000417285 ARSIQ5FYB1 569 aa25.86■■□□□ 1.73
VEGFA-208ENST00000417285 CAVIN1Q6NZI2 390 aaKnown RBP25.86■■□□□ 1.73
VEGFA-208ENST00000417285 ERN2Q76MJ5 926 aaKnown RBP25.86■■□□□ 1.73
VEGFA-208ENST00000417285 PHF13Q86YI8 300 aaPredicted RBP25.86■■□□□ 1.73
VEGFA-208ENST00000417285 GATAD2AQ86YP4 633 aa25.86■■□□□ 1.73
VEGFA-208ENST00000417285 PLPP6Q8IY26 295 aa25.86■■□□□ 1.73
VEGFA-208ENST00000417285 LDOC1O95751 146 aaPredicted RBP25.85■■□□□ 1.73
VEGFA-208ENST00000417285 C1SP09871 688 aa25.85■■□□□ 1.73
VEGFA-208ENST00000417285 GLDCP23378 1020 aa25.85■■□□□ 1.73
VEGFA-208ENST00000417285 MAPKAPK2P49137 400 aa25.85■■□□□ 1.73
VEGFA-208ENST00000417285 GEMIN4P57678 1058 aaKnown RBP25.85■■□□□ 1.73
VEGFA-208ENST00000417285 C15orf59Q2T9L4 293 aaPredicted RBP25.85■■□□□ 1.73
VEGFA-208ENST00000417285 CARD16Q5EG05 197 aa25.85■■□□□ 1.73
VEGFA-208ENST00000417285 RWDD4Q6NW29 188 aaKnown RBP25.85■■□□□ 1.73
VEGFA-208ENST00000417285 DPY19L3Q6ZPD9 716 aa25.85■■□□□ 1.73
VEGFA-208ENST00000417285 HORMAD1Q86X24 394 aa25.85■■□□□ 1.73
VEGFA-208ENST00000417285 DRC7Q8IY82 874 aa25.85■■□□□ 1.73
VEGFA-208ENST00000417285 CHST14Q8NCH0 376 aa25.85■■□□□ 1.73
VEGFA-208ENST00000417285 JOSD2Q8TAC2 188 aa25.85■■□□□ 1.73
VEGFA-208ENST00000417285 ISG20Q96AZ6 181 aaKnown RBP25.85■■□□□ 1.73
VEGFA-208ENST00000417285 KLHDC7BQ96G42 594 aa25.85■■□□□ 1.73
VEGFA-208ENST00000417285 AGPAT1Q99943 283 aa25.85■■□□□ 1.73
VEGFA-208ENST00000417285 HEPHQ9BQS7 1158 aa25.85■■□□□ 1.73
VEGFA-208ENST00000417285 SELENOOQ9BVL4 669 aa25.85■■□□□ 1.73
VEGFA-208ENST00000417285 TNKS2Q9H2K2 1166 aa25.85■■□□□ 1.73
VEGFA-208ENST00000417285 PCDHGA1Q9Y5H4 931 aa25.85■■□□□ 1.73
VEGFA-208ENST00000417285 ZNF821O75541 412 aaPredicted RBP25.84■■□□□ 1.73
VEGFA-208ENST00000417285 PLEKP08567 350 aaPredicted RBP25.84■■□□□ 1.73
VEGFA-208ENST00000417285 FERP16591 822 aa25.84■■□□□ 1.73
VEGFA-208ENST00000417285 EPHA8P29322 1005 aaPredicted RBP25.84■■□□□ 1.73
VEGFA-208ENST00000417285 RFC1P35251 1148 aaPredicted RBP25.84■■□□□ 1.73
VEGFA-208ENST00000417285 FILIP1LQ4L180 1135 aa25.84■■□□□ 1.73
VEGFA-208ENST00000417285 MANEALQ5VSG8 457 aa25.84■■□□□ 1.73
VEGFA-208ENST00000417285 SPATS2Q86XZ4 545 aaKnown RBP25.84■■□□□ 1.73
VEGFA-208ENST00000417285 C3orf20Q8ND61 904 aa25.84■■□□□ 1.73
VEGFA-208ENST00000417285 ARRDC3Q96B67 414 aa25.84■■□□□ 1.73
VEGFA-208ENST00000417285 MAGEH1Q9H213 219 aa25.84■■□□□ 1.73
VEGFA-208ENST00000417285 CCDC86Q9H6F5 360 aaKnown RBP25.84■■□□□ 1.73
VEGFA-208ENST00000417285 NYNRINQ9P2P1 1898 aaKnown RBP25.84■■□□□ 1.73
VEGFA-208ENST00000417285 HPCAL4Q9UM19 191 aa25.84■■□□□ 1.73
VEGFA-208ENST00000417285 A0A1W2PQU0 124 aa25.83■■□□□ 1.73
VEGFA-208ENST00000417285 SIGLEC16A6NMB1 481 aa25.83■■□□□ 1.73
VEGFA-208ENST00000417285 LEFTY1O75610 366 aa25.83■■□□□ 1.73
VEGFA-208ENST00000417285 DNA2P51530 1060 aa25.83■■□□□ 1.73
VEGFA-208ENST00000417285 C1QBPQ07021 282 aaKnown RBP25.83■■□□□ 1.73
VEGFA-208ENST00000417285 SMAD1Q15797 465 aaKnown RBP25.83■■□□□ 1.73
VEGFA-208ENST00000417285 PROSER1Q86XN7 944 aa25.83■■□□□ 1.73
VEGFA-208ENST00000417285 FAM174AQ8TBP5 190 aa25.83■■□□□ 1.73
VEGFA-208ENST00000417285 FAM172AQ8WUF8 416 aa25.83■■□□□ 1.73
VEGFA-208ENST00000417285 NTAN1Q96AB6 310 aa25.83■■□□□ 1.73
VEGFA-208ENST00000417285 RTN4Q9NQC3 1192 aaKnown RBP25.83■■□□□ 1.73
VEGFA-208ENST00000417285 TMEM248Q9NWD8 314 aa25.83■■□□□ 1.73
VEGFA-208ENST00000417285 MYO6Q9UM54 1294 aa25.83■■□□□ 1.73
VEGFA-208ENST00000417285 WASF2Q9Y6W5 498 aa25.83■■□□□ 1.73
VEGFA-208ENST00000417285 SPEGQ15772 3267 aa25.83■■□□□ 1.73
VEGFA-208ENST00000417285 PLXNA2O75051 1894 aa25.83■■□□□ 1.72
VEGFA-208ENST00000417285 ANKRD62A6NC57 917 aa25.82■■□□□ 1.72
VEGFA-208ENST00000417285 ENC1O14682 589 aa25.82■■□□□ 1.72
VEGFA-208ENST00000417285 SLC31A1O15431 190 aa25.82■■□□□ 1.72
VEGFA-208ENST00000417285 TEX33O43247 280 aa25.82■■□□□ 1.72
VEGFA-208ENST00000417285 PCDH8O95206 1070 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms