RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 TMCO2Q7Z6W1 182 aaPredicted RBP3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 SYVN1Q86TM6 617 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 FAM35AQ86V20 835 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 IQCHQ86VS3 1027 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 LYSMD2Q8IV50 215 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 ARHGAP12Q8IWW6 846 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 DNAJC10Q8IXB1 793 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 TIGD4Q8IY51 512 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 CARFQ8N187 725 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 SFRP1Q8N474 314 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 MEIOBQ8N635 442 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 PI4KAP1Q8N8J0 262 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 DCBLD1Q8N8Z6 715 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 DNAAF3Q8N9W5 541 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 IL17RCQ8NAC3 791 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 NHLRC2Q8NBF2 726 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 TMEM116Q8NCL8 245 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 BHLHE23Q8NDY6 225 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 AGBL3Q8NEM8 1001 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 BBS1Q8NFJ9 593 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 GPR156Q8NFN8 814 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 DNAJB8Q8NHS0 232 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 HUS1BQ8NHY5 278 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 SLC22A8Q8TCC7 542 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 RAPGEF4Q8WZA2 1011 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 ANKRD7Q92527 254 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 SLC9A6Q92581 669 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 DPF1Q92782 380 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 FBXO32Q969P5 355 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 INTS12Q96CB8 462 aaKnown RBP3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 PRR11Q96HE9 360 aaPredicted RBP3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 TMX3Q96JJ7 454 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 RPGRIP1Q96KN7 1286 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 SAMD8Q96LT4 415 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 NSMCE2Q96MF7 247 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 PRICKLE1Q96MT3 831 aaPredicted RBP3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 LMF1Q96S06 567 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 MAP7D2Q96T17 732 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 PARK7Q99497 189 aaKnown RBP3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 FDXACB1Q9BRP7 624 aaPredicted RBP3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 SYT17Q9BSW7 474 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 PHF7Q9BWX1 381 aaPredicted RBP3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 TBC1D10AQ9BXI6 508 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 PKIBQ9C010 78 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 UBE2OQ9C0C9 1292 aaKnown RBP3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 RNF32Q9H0A6 362 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 CDIP1Q9H305 208 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 C12orf65Q9H3J6 166 aaKnown RBP3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 RMND5AQ9H871 391 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 PSTPIP2Q9H939 334 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 SYNPO2LQ9H987 977 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 AKIRIN1Q9H9L7 192 aaPredicted RBP3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 SCPEP1Q9HB40 452 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 BARX1Q9HBU1 254 aaPredicted RBP3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 SENP2Q9HC62 589 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 RRP7BPQ9NSQ0 103 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 LIN7CQ9NUP9 197 aaKnown RBP3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 FAM118AQ9NWS6 357 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 ZDHHC7Q9NXF8 308 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 DNAJB12Q9NXW2 375 aaKnown RBP3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 TBC1D7Q9P0N9 293 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 PIM2Q9P1W9 311 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 ARHGAP20Q9P2F6 1191 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 KLHL14Q9P2G3 628 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 KCNH3Q9ULD8 1083 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 CAPN11Q9UMQ6 739 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 USP18Q9UMW8 372 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 CNTN6Q9UQ52 1028 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 PRELID1Q9Y255 219 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 DYRK1BQ9Y463 629 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 PLEKHM1Q9Y4G2 1056 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 PCDHB6Q9Y5E3 794 aa3.21□□□□□ -1.9
CTDSPL-203ENST00000416688 LOC102723971A0A1B0GUV8 181 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 ERICH2A1L162 156 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 SMIM30A4D0T7 59 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 FAM90A18PA6NE21 464 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 FAM90A16PA6NEW6 464 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 CFAP73A6NFT4 308 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 PRAMEF25A6NGN4 478 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 ARHGAP42A6NI28 874 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 FAM90A20PA6NIJ5 464 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 SLC15A5A6NIM6 579 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 WTIPA6NIX2 430 aaPredicted RBP3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 ZSCAN5BA6NJL1 495 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 SH2D7A6NKC9 451 aaPredicted RBP3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 AQP7P3A6NL99 342 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 FAM90A9PA6NNJ1 464 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 FAM90A5PA8MXJ8 464 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 FOXO6A8MYZ6 492 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 A8MZ25 164 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 SPECC1L-ADORA2AF8WAN1 911 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 K7ERQ8 282 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 RAB27BO00194 218 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 PLK4O00444 970 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 PIK3R2O00459 728 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 MEIS1O00470 390 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 PER2O15055 1255 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 GPRIN2O60269 458 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 TSPAN1O60635 241 aa3.2□□□□□ -1.9
CTDSPL-203ENST00000416688 HSF2BPO75031 334 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms