RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 GULP1Q9UBP9 304 aa16.16■□□□□ 0.18
CPNE1-208ENST00000414711 SDK2Q58EX2 2172 aa16.16■□□□□ 0.18
CPNE1-208ENST00000414711 A0A087X0B3 334 aa16.15■□□□□ 0.18
CPNE1-208ENST00000414711 ZNF891A8MT65 544 aaPredicted RBP16.15■□□□□ 0.18
CPNE1-208ENST00000414711 KPNA3O00505 521 aaPredicted RBP16.15■□□□□ 0.18
CPNE1-208ENST00000414711 YY2O15391 372 aa16.15■□□□□ 0.18
CPNE1-208ENST00000414711 ATP9BO43861 1147 aa16.15■□□□□ 0.18
CPNE1-208ENST00000414711 CTSLP07711 333 aa16.15■□□□□ 0.18
CPNE1-208ENST00000414711 PDGFRAP16234 1089 aa16.15■□□□□ 0.18
CPNE1-208ENST00000414711 GJB2P29033 226 aa16.15■□□□□ 0.18
CPNE1-208ENST00000414711 ZFP36L1Q07352 338 aaKnown RBP16.15■□□□□ 0.18
CPNE1-208ENST00000414711 TMEM164Q5U3C3 297 aa16.15■□□□□ 0.18
CPNE1-208ENST00000414711 PHACTR4Q8IZ21 702 aa16.15■□□□□ 0.18
CPNE1-208ENST00000414711 IL22RA1Q8N6P7 574 aa16.15■□□□□ 0.18
CPNE1-208ENST00000414711 ANKRD52Q8NB46 1076 aa16.15■□□□□ 0.18
CPNE1-208ENST00000414711 GALNT11Q8NCW6 608 aa16.15■□□□□ 0.18
CPNE1-208ENST00000414711 GPBAR1Q8TDU6 330 aa16.15■□□□□ 0.18
CPNE1-208ENST00000414711 ERCC4Q92889 916 aaPredicted RBP16.15■□□□□ 0.18
CPNE1-208ENST00000414711 TATDN2Q93075 761 aa16.15■□□□□ 0.18
CPNE1-208ENST00000414711 TBATAQ96M53 351 aa16.15■□□□□ 0.18
CPNE1-208ENST00000414711 EPAS1Q99814 870 aa16.15■□□□□ 0.18
CPNE1-208ENST00000414711 B3GNT4Q9C0J1 378 aa16.15■□□□□ 0.18
CPNE1-208ENST00000414711 DYRK4Q9NR20 520 aa16.15■□□□□ 0.18
CPNE1-208ENST00000414711 CGNQ9P2M7 1197 aaKnown RBP16.15■□□□□ 0.18
CPNE1-208ENST00000414711 FBXO2Q9UK22 296 aaPredicted RBP16.15■□□□□ 0.18
CPNE1-208ENST00000414711 SMC3Q9UQE7 1217 aa16.15■□□□□ 0.18
CPNE1-208ENST00000414711 XPO1O14980 1071 aaKnown RBP16.14■□□□□ 0.17
CPNE1-208ENST00000414711 CNTN5O94779 1100 aa16.14■□□□□ 0.17
CPNE1-208ENST00000414711 VASPP50552 380 aaPredicted RBP16.14■□□□□ 0.17
CPNE1-208ENST00000414711 SLC12A1Q13621 1099 aa16.14■□□□□ 0.17
CPNE1-208ENST00000414711 DLG2Q15700 870 aa16.14■□□□□ 0.17
CPNE1-208ENST00000414711 ARHGAP17Q68EM7 881 aa16.14■□□□□ 0.17
CPNE1-208ENST00000414711 HEATR4Q86WZ0 1026 aa16.14■□□□□ 0.17
CPNE1-208ENST00000414711 CCNJLQ8IV13 435 aa16.14■□□□□ 0.17
CPNE1-208ENST00000414711 LGI2Q8N0V4 545 aa16.14■□□□□ 0.17
CPNE1-208ENST00000414711 FCRL2Q96LA5 508 aaPredicted RBP16.14■□□□□ 0.17
CPNE1-208ENST00000414711 CLIC6Q96NY7 704 aa16.14■□□□□ 0.17
CPNE1-208ENST00000414711 SLC17A9Q9BYT1 436 aa16.14■□□□□ 0.17
CPNE1-208ENST00000414711 PANK2Q9BZ23 570 aa16.14■□□□□ 0.17
CPNE1-208ENST00000414711 SLC25A13Q9UJS0 675 aa16.14■□□□□ 0.17
CPNE1-208ENST00000414711 TP53TG5Q9Y2B4 290 aa16.14■□□□□ 0.17
CPNE1-208ENST00000414711 FPGTO14772 594 aa16.13■□□□□ 0.17
CPNE1-208ENST00000414711 MOCS2O96007 188 aaPredicted RBP16.13■□□□□ 0.17
CPNE1-208ENST00000414711 PAK4O96013 591 aaPredicted RBP16.13■□□□□ 0.17
CPNE1-208ENST00000414711 TSHRP16473 764 aa16.13■□□□□ 0.17
CPNE1-208ENST00000414711 ITGB7P26010 798 aa16.13■□□□□ 0.17
CPNE1-208ENST00000414711 RPS21P63220 83 aaKnown RBP16.13■□□□□ 0.17
CPNE1-208ENST00000414711 GOLGA7BQ2TAP0 167 aa16.13■□□□□ 0.17
CPNE1-208ENST00000414711 KIAA1161Q6NSJ0 714 aa16.13■□□□□ 0.17
CPNE1-208ENST00000414711 PCDH19Q8TAB3 1148 aa16.13■□□□□ 0.17
CPNE1-208ENST00000414711 RNF34Q969K3 372 aa16.13■□□□□ 0.17
CPNE1-208ENST00000414711 SLC13A1Q9BZW2 595 aa16.13■□□□□ 0.17
CPNE1-208ENST00000414711 CLPBQ9H078 707 aa16.13■□□□□ 0.17
CPNE1-208ENST00000414711 NAALADL1Q9UQQ1 740 aa16.13■□□□□ 0.17
CPNE1-208ENST00000414711 TRPM6Q9BX84 2022 aa16.12■□□□□ 0.17
CPNE1-208ENST00000414711 DDAH2O95865 285 aa16.12■□□□□ 0.17
CPNE1-208ENST00000414711 CELA2BP08218 269 aaPredicted RBP16.12■□□□□ 0.17
CPNE1-208ENST00000414711 PRKAR1AP10644 381 aa16.12■□□□□ 0.17
CPNE1-208ENST00000414711 DAOAP59103 153 aa16.12■□□□□ 0.17
CPNE1-208ENST00000414711 KRTAP21-3Q3LHN1 58 aa16.12■□□□□ 0.17
CPNE1-208ENST00000414711 PHF19Q5T6S3 580 aa16.12■□□□□ 0.17
CPNE1-208ENST00000414711 ERN2Q76MJ5 926 aaKnown RBP16.12■□□□□ 0.17
CPNE1-208ENST00000414711 TMPRSS9Q7Z410 1059 aa16.12■□□□□ 0.17
CPNE1-208ENST00000414711 EFCAB3Q8N7B9 438 aa16.12■□□□□ 0.17
CPNE1-208ENST00000414711 TEX19Q8NA77 164 aa16.12■□□□□ 0.17
CPNE1-208ENST00000414711 SLC4A11Q8NBS3 891 aa16.12■□□□□ 0.17
CPNE1-208ENST00000414711 APOBEC4Q8WW27 367 aaKnown RBP16.12■□□□□ 0.17
CPNE1-208ENST00000414711 KLF6Q99612 283 aaPredicted RBP16.12■□□□□ 0.17
CPNE1-208ENST00000414711 TNMDQ9H2S6 317 aa16.12■□□□□ 0.17
CPNE1-208ENST00000414711 CNGB3Q9NQW8 809 aa16.12■□□□□ 0.17
CPNE1-208ENST00000414711 PNMA8BQ9ULN7 279 aaPredicted RBP16.12■□□□□ 0.17
CPNE1-208ENST00000414711 DOLKQ9UPQ8 538 aa16.12■□□□□ 0.17
CPNE1-208ENST00000414711 SRPRBQ9Y5M8 271 aaKnown RBP16.12■□□□□ 0.17
CPNE1-208ENST00000414711 SPTLC2O15270 562 aa16.11■□□□□ 0.17
CPNE1-208ENST00000414711 CLDN1O95832 211 aa16.11■□□□□ 0.17
CPNE1-208ENST00000414711 PRR29P0C7W0 189 aa16.11■□□□□ 0.17
CPNE1-208ENST00000414711 NR1D1P20393 614 aa16.11■□□□□ 0.17
CPNE1-208ENST00000414711 GRNP28799 593 aaKnown RBP16.11■□□□□ 0.17
CPNE1-208ENST00000414711 CHRNA3P32297 505 aa16.11■□□□□ 0.17
CPNE1-208ENST00000414711 RECQLP46063 649 aaPredicted RBP16.11■□□□□ 0.17
CPNE1-208ENST00000414711 THOP1P52888 689 aa16.11■□□□□ 0.17
CPNE1-208ENST00000414711 PLK1P53350 603 aa16.11■□□□□ 0.17
CPNE1-208ENST00000414711 RAD23BP54727 409 aa16.11■□□□□ 0.17
CPNE1-208ENST00000414711 PFN3P60673 137 aa16.11■□□□□ 0.17
CPNE1-208ENST00000414711 CDC20Q12834 499 aa16.11■□□□□ 0.17
CPNE1-208ENST00000414711 SEPT6Q14141 434 aa16.11■□□□□ 0.17
CPNE1-208ENST00000414711 C1QL3Q5VWW1 255 aa16.11■□□□□ 0.17
CPNE1-208ENST00000414711 RAP1GAP2Q684P5 730 aa16.11■□□□□ 0.17
CPNE1-208ENST00000414711 BRAPQ7Z569 592 aa16.11■□□□□ 0.17
CPNE1-208ENST00000414711 CHSY1Q86X52 802 aa16.11■□□□□ 0.17
CPNE1-208ENST00000414711 SLITRK4Q8IW52 837 aa16.11■□□□□ 0.17
CPNE1-208ENST00000414711 SCG3Q8WXD2 468 aaKnown RBP16.11■□□□□ 0.17
CPNE1-208ENST00000414711 HDAC8Q9BY41 377 aa16.11■□□□□ 0.17
CPNE1-208ENST00000414711 CDH19Q9H159 772 aa16.11■□□□□ 0.17
CPNE1-208ENST00000414711 FOXD4L1Q9NU39 408 aa16.11■□□□□ 0.17
CPNE1-208ENST00000414711 XPO7Q9UIA9 1087 aaKnown RBP16.11■□□□□ 0.17
CPNE1-208ENST00000414711 TSPAN16Q9UKR8 245 aa16.11■□□□□ 0.17
CPNE1-208ENST00000414711 FARP1Q9Y4F1 1045 aaPredicted RBP16.11■□□□□ 0.17
CPNE1-208ENST00000414711 RNF215Q9Y6U7 377 aa16.11■□□□□ 0.17
CPNE1-208ENST00000414711 ZFHX3Q15911 3703 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms